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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g071470.3.1
CDS Infomation

WD40-repeat-containing domain-containing protein (AHRD V3.3 *** A0A103XXC8_CYNCS)
Sequence

ATGTTGGAGTTGAAGGCAAAGTTTTTGAAGAAAGCAGTGATTTCTTCCACTCTAATTGAG
CATCCATCCCCTGCCAATCTTCAGTCTACTCGTCTTGCCATTCATATGAATGATGATAAT
GATTCTTCTTGTTGGGTTTACATTGCATCTGGCTGCCGCATTTATAAAGTTCTTATTCCA
ATGGAAAATTCATTGCTCAATCTAGGAAAGGAGGACCTTCTAATTCCTGAACAATGTGAG
GTTCTAGAAGCTTCAGTGGTCAATCGTTGCCCGCATCGATCAGAAATCCAAAGTATAGTG
CTAGCTGAAACTGAAAGCTCTGGTTGCTCAATGCTGGGAAGCGTGGATTCTTATGGTCAC
CTTATTGTCTCTAGATTGGATGCCAATGGTGACGATGTCAACGGGCTTACGTATTCTGTC
TCTCCTCGAGATTGTGGTGTTGGAGAAGGTAGCTGGGCAGGCCTGTGCTTCAATCCCACT
CAACGATCCATGGCAGCTGTGGCTCACAGTTTCTCTAAAACCATTGATGTCTATGACCAA
GATATTCATGTCCGCACCTTACGTCCATTGTGGCATCCATCTTCACTTATGTTCATGCAA
AATTTGGACTTAGGTGGTGGAAATTCTGTATTAGCAGTTGCAGAAGGTTGCCAGCTGACA
ATATGGGACTTGCGAATGAAAGAAAAGGGTGGTTGTGTGCGTCGAATCTGTGGATCTGTA
GGAGATAACTTGTATGCAGTCTGTAATTCTTCAAAAGGTACTATTGCAGCTGGTGGAGCT
GATCGTACTGTGACTGTCTATGATCCTCGCAGATGGTCAGCAGTGTCGAGATGGCTAAAC
TGCTCTAAGTATGAGATAACTGGACTTGCTTTCTCTTCCGTTGATCCTGAATATGTCTAT
GTACAAGGCGTTGACTACGAGGTCATCTGTGGACGATGGCAAGAAAGCAAGAAAATATTT
TCGTATCGAGGAGATTCTAATTGGCTCGGATTTAGCAAGTGTTCAGACAGGGATGTCTTG
GGGGGTTGGTCCGACTCAGGTAGCTTATTTGTCGCTGATATCCGTGCAGTGAACGGATTA
CACCTTCCTGCTGCAACCAGTGTTTTTTAA

Peptide Sequence

PEP ID

Solyc04g071470.3.1
PEP Infomation

WD40-repeat-containing domain-containing protein (AHRD V3.3 *** A0A103XXC8_CYNCS)
Sequence

MLELKAKFLKKAVISSTLIEHPSPANLQSTRLAIHMNDDNDSSCWVYIASGCRIYKVLIP
MENSLLNLGKEDLLIPEQCEVLEASVVNRCPHRSEIQSIVLAETESSGCSMLGSVDSYGH
LIVSRLDANGDDVNGLTYSVSPRDCGVGEGSWAGLCFNPTQRSMAAVAHSFSKTIDVYDQ
DIHVRTLRPLWHPSSLMFMQNLDLGGGNSVLAVAEGCQLTIWDLRMKEKGGCVRRICGSV
GDNLYAVCNSSKGTIAAGGADRTVTVYDPRRWSAVSRWLNCSKYEITGLAFSSVDPEYVY
VQGVDYEVICGRWQESKKIFSYRGDSNWLGFSKCSDRDVLGGWSDSGSLFVADIRAVNGL
HLPAATSVF*

Transcript Sequence

Transcript ID

Solyc04g071470.3.1
Transcript Infomation

WD40-repeat-containing domain-containing protein (AHRD V3.3 *** A0A103XXC8_CYNCS)
Sequence

CACTAAATAAAGTCACTTATATTAATTTGCGAAAATACATTATTTTCAACAAAAATACTT
TTTTGAAAAATACGTGTCTCCGCAATCCCAAACAGGGTTTGTTGATGTTTGGGGTCAGGG
ACTTGACGAAGAGCTTCAACAAAAGTTTGAAGTTGAAGCAGAGAAACTGACAAGTAATGT
TGGAGTTGAAGGCAAAGTTTTTGAAGAAAGCAGTGATTTCTTCCACTCTAATTGAGCATC
CATCCCCTGCCAATCTTCAGTCTACTCGTCTTGCCATTCATATGAATGATGATAATGATT
CTTCTTGTTGGGTTTACATTGCATCTGGCTGCCGCATTTATAAAGTTCTTATTCCAATGG
AAAATTCATTGCTCAATCTAGGAAAGGAGGACCTTCTAATTCCTGAACAATGTGAGGTTC
TAGAAGCTTCAGTGGTCAATCGTTGCCCGCATCGATCAGAAATCCAAAGTATAGTGCTAG
CTGAAACTGAAAGCTCTGGTTGCTCAATGCTGGGAAGCGTGGATTCTTATGGTCACCTTA
TTGTCTCTAGATTGGATGCCAATGGTGACGATGTCAACGGGCTTACGTATTCTGTCTCTC
CTCGAGATTGTGGTGTTGGAGAAGGTAGCTGGGCAGGCCTGTGCTTCAATCCCACTCAAC
GATCCATGGCAGCTGTGGCTCACAGTTTCTCTAAAACCATTGATGTCTATGACCAAGATA
TTCATGTCCGCACCTTACGTCCATTGTGGCATCCATCTTCACTTATGTTCATGCAAAATT
TGGACTTAGGTGGTGGAAATTCTGTATTAGCAGTTGCAGAAGGTTGCCAGCTGACAATAT
GGGACTTGCGAATGAAAGAAAAGGGTGGTTGTGTGCGTCGAATCTGTGGATCTGTAGGAG
ATAACTTGTATGCAGTCTGTAATTCTTCAAAAGGTACTATTGCAGCTGGTGGAGCTGATC
GTACTGTGACTGTCTATGATCCTCGCAGATGGTCAGCAGTGTCGAGATGGCTAAACTGCT
CTAAGTATGAGATAACTGGACTTGCTTTCTCTTCCGTTGATCCTGAATATGTCTATGTAC
AAGGCGTTGACTACGAGGTCATCTGTGGACGATGGCAAGAAAGCAAGAAAATATTTTCGT
ATCGAGGAGATTCTAATTGGCTCGGATTTAGCAAGTGTTCAGACAGGGATGTCTTGGGGG
GTTGGTCCGACTCAGGTAGCTTATTTGTCGCTGATATCCGTGCAGTGAACGGATTACACC
TTCCTGCTGCAACCAGTGTTTTTTAATTTGATTTGATTTTACGGCGGGGCAGGGCGTATG
CCTGTAAGCCCCCAACGTTAAATTTTAACTTTTGTTGTTTTGAAGTATTTTTGCTATATA
TTGGTGTTATTTATACTTTATGTTATTATGTTTGAGATAACCTTACCCGTGTTTTGGAGT
TAACGCCTAGCCTACTGTTGTATAAAACACCTCGCCTCACCTTTAAATGAACTTGTTTCT
CTTCATCCTGCATTTTACTCCATCCTGTACACAAGTCATGCAACACTCGAGCCATTTGTT
GGTTAACAGCATCAATTATCTTGATAAGATTGTCGTTTAAAACTCTGTATGAAAAAGATC
AAGAGTGCCCCGAAAGCCCCAAAGAACGGAAATGGAATTTGATTTGTGTGGTTCCTTTTT
ACATATTGAAGTATTGAATAGTGTTATATGATATTTATTGTGCAGAGACATTACAAATAA
TAGATAAATTAATTGAATCGCAGCAATTTAATTCTCATATCATCATTTATTGGAAGAAAA
AAGAAGAGAGAAAGCGTTACATAAGTTTGAAATGGTGTACTTATTTACTACAGGTGAATG
AGCCAACACAACAAGTTCTTTCTTTTTCTTGTTTTTGGAATTTCCTATCAAGACTTTTGT
CAAAATTATTCTCTTTGATTCAAATTACTATTATTTTGTAGACTTTACATTAAATATCTG
CTTTGATATATGTTAATTTAAAGCCAGTCCAATTTCTTTTAAGTTGTTTCCCCCAGAAGT
TCTCAAATTCAATGTCTGAAGTTGAGGATTCTTAGATCAAACAAAATTATATGAAGTTTG
AACTCATTCAAATATCAAGCATTGTTTGATACTTTTTAACTTTAGACACATACGGAAGGT
TAATATTTGGAGTGTTAACCTCATTATTTTCAACTTCAATTTAGCAAATTTGAATACGAC
TTTCAAGACTATTAAAATTTAAATTTTGAATCAATATAAACATAAAATATTTTTAATTAA
TGAAATGACTTTTTATTTTTTACAATTACAAATATTTTGAGAAGAAGTCATAAAAAATGA
CCAATATGTTGAATTGGAGCAAATTGAAGGAGTCAATTTAGATGAATCTTTCAAAGGTCA
AGATATGTAAGCATTGAGGAGACAAGATCAACTTGCACTAAAGCAATTTATTTTCTTCTC
AATTATTTTTGGACCCTAAAAAAGTTTATTGAGCTCCAATAGGGTTGGGTCCACCCCCAA
AATAAAACTTTTGGACAATACTTAATATGGACCTACCTTTATCTAGACTAACCCCTCCAA
TGCCTATGGAAATGTACCACCTCTCCACTCCAAAACCCTAACTACCAAAAACAAGGAAAA
GAAATACTACTTT