Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g071320.3.1
CDS Infomation	ubiquitin interaction motif-containing protein (AHRD V3.3 *** AT1G43690.1)
Sequence	ATGGCGGATCAAGAAGATGAAGAGTTGAAAATGGCGTTAAGGATGAGTATGCAGAAGGAG TCGCCAGAGCCTAAGAGGAGTAAACCGGGAGAGGAGGAGGTATCTGGTGGCGGTGGTGGG GAGGAAGGGGAGTCGCCTGAGGTGAAAAACAGGCGACGTCAGAGGGAATTGATGGCTGCT GCTGCTGAAAAGCGGATGTTGGCGTTGCCCAAGAATGTGGTGTTGGAGAAGAGTGGTGGG TCTGGCAATAGAGAGGTGGAATGTAAGGGTAAGAGTGTGAATTTGGTGAAGGGGGAAGAG AGAAATGTGAACTTGGTGAAGGGTGCGGAGAAAAATGTGAACTTGGTGAAGGGTAAGGAG AAAAATGTGAACTTAATGGAAGAACTTCCATTGGCAGAGGCCAATGAGTTGTTTTCAATG ATCTTTGGTTGTGAAGTTACCAAGGATATTCTTGGTCAGTGGACTAATCAGGGCATAAGG TTTAGTCCGGATCCAGATACATCTATGGGTTTAGTGCAGCATGAGGGTGGGCCCTGTGGG GTGCTAGCAGCAATACAGGCTTTTGTTCTGAAGCACCTATTGTTTTTCTCGGATGATTTA AATATGGTTTCACCTAGCTTGTCTGGCAATGTGGATTCGAGAAGATTGGCTAATAAAGAT TCTGCTGGAGCTGATATTTTTTCGTCTCTAAGTGAAGAGAAAAAATCAAGAGCATTGGTA AGAGGCATGTGTGAGATATTGTTTATGTGTGGAAGCAATAGAAGGGTTGTGATAGCATCT TTGAGAACAGTTGAAGCTATCCTTGTGGGGCCTCAGGGCTGTTCAGGTGATGAGGTCATT TCTAAAGCACTTGAAGGTCTCTCAATTGAGTCTGGGGCTAACTTGCAAAAGGCTTTAATC ATTAATACGTATACTTCTTCAGAGGATGCTCTTCAAAGGCTTGAAGCATTGCTTCCAGTA TTCCGAAGTCGTATGGGAGCAATGCTGTTCCTAATATCTGCTTTGCTTTCTCATGGAATG GAATCTGTCCAAGCTGATAGGGATGATCCTTCTCAACCTTTGGTTACAGCACCTTTTGGA CATGCTTCACAGGAAATTGTGAACCTGTTGCTTTCTGGTGAAGCTGTTGCCAATGTGTTT GACGGGAGGATGGATTTGGGTGGTGGCATGTTTGTGAAGGGTATCTCTACAACAGTTGAA GTTGGATTTATTACTCTGCTAGAGTCCCTGAACTTTTGTAAAGTTGGCTTGCATTTGAAA TGCCCGGCATGGCCAATATGGGTTGTTGGCAGTGAATCTCATTACACTGTCTTATTTGCT TTAGATACAAAAGTTCAGGAGGAGAATGAACTTGAAGGCAAGGAAACAAAGATCCGTAGA GCTTTTGATGCTCAAGATCAGAGTGGAGGTGGTGGATTTATTAGTGTGGAAGGTTTTCAT CAAGTCCTTAGGGATACTAATGTGAATCTTCCAGCTGACAAGCTTCAAAACCTCTGTAGC AGTGGATACATTGTATGGAGTGAATTCTGGCAGGTCCTGTTGGACTTGGACAATAGTTTG GGAGGGCTGAAAGATCCTAGTGGATTAATGGGGAAAAAGGTCTTTGATCTTTACCACTTC AATGGGATTGCAAAATCAGTTATGAGTGGAAACCAGGTTTCATCCGGAAATGATATTCCG GTACAAAGGCCTAGACTCACTAAGCTGAGGGTTTCAGTTCCCCCAAGGTGGACGCCAGAG GAGTTCATGTCTTCAGGCCCAAGTACAAGTGATCCTGCCGGTAAGGATTCTGTCACTGAA GTTTCAAAACCTGAACCTTCTCAGCATGCTCCATTAGTTGACTGCATCCGGACACGCTGG GCCCGAGCCACATGTACTTGGGAAGGTGATCCACCAAGCATAGTTTGA

Peptide Sequence

PEP ID	Solyc04g071320.3.1
PEP Infomation	ubiquitin interaction motif-containing protein (AHRD V3.3 *** AT1G43690.1)
Sequence	MADQEDEELKMALRMSMQKESPEPKRSKPGEEEVSGGGGGEEGESPEVKNRRRQRELMAA AAEKRMLALPKNVVLEKSGGSGNREVECKGKSVNLVKGEERNVNLVKGAEKNVNLVKGKE KNVNLMEELPLAEANELFSMIFGCEVTKDILGQWTNQGIRFSPDPDTSMGLVQHEGGPCG VLAAIQAFVLKHLLFFSDDLNMVSPSLSGNVDSRRLANKDSAGADIFSSLSEEKKSRALV RGMCEILFMCGSNRRVVIASLRTVEAILVGPQGCSGDEVISKALEGLSIESGANLQKALI INTYTSSEDALQRLEALLPVFRSRMGAMLFLISALLSHGMESVQADRDDPSQPLVTAPFG HASQEIVNLLLSGEAVANVFDGRMDLGGGMFVKGISTTVEVGFITLLESLNFCKVGLHLK CPAWPIWVVGSESHYTVLFALDTKVQEENELEGKETKIRRAFDAQDQSGGGGFISVEGFH QVLRDTNVNLPADKLQNLCSSGYIVWSEFWQVLLDLDNSLGGLKDPSGLMGKKVFDLYHF NGIAKSVMSGNQVSSGNDIPVQRPRLTKLRVSVPPRWTPEEFMSSGPSTSDPAGKDSVTE VSKPEPSQHAPLVDCIRTRWARATCTWEGDPPSIV*

Transcript Sequence

Transcript ID	Solyc04g071320.3.1
Transcript Infomation	ubiquitin interaction motif-containing protein (AHRD V3.3 *** AT1G43690.1)
Sequence	CCCCTTGTGTTAATGCAAAATATATATAGTATAATTAAATAAAATCCAGCTTTTATTAGC TTTCGATTCTCTCATTATATATGAATCAAATTGATTTAATTCAATCTTTGTACATATATT CATGTATTTTTGTATGAACACTCCAGACTGATCTTTTGAAATTCTACTGTATTGTACATC TGTAACTGAAAAAAAAATCTCATTGGGTTTGAAAACCCTAAGTTAGAATTTCAAGAAAAC CTTGGCTTTTGCTCAAAGATTCGATTTTGTTTACTGTTTTGTGGAATTCCTGGATCTGGG TCTGTGAAAGAATCTTCTGGGATTCTTTTAATATACAAATGGCGGATCAAGAAGATGAAG AGTTGAAAATGGCGTTAAGGATGAGTATGCAGAAGGAGTCGCCAGAGCCTAAGAGGAGTA AACCGGGAGAGGAGGAGGTATCTGGTGGCGGTGGTGGGGAGGAAGGGGAGTCGCCTGAGG TGAAAAACAGGCGACGTCAGAGGGAATTGATGGCTGCTGCTGCTGAAAAGCGGATGTTGG CGTTGCCCAAGAATGTGGTGTTGGAGAAGAGTGGTGGGTCTGGCAATAGAGAGGTGGAAT GTAAGGGTAAGAGTGTGAATTTGGTGAAGGGGGAAGAGAGAAATGTGAACTTGGTGAAGG GTGCGGAGAAAAATGTGAACTTGGTGAAGGGTAAGGAGAAAAATGTGAACTTAATGGAAG AACTTCCATTGGCAGAGGCCAATGAGTTGTTTTCAATGATCTTTGGTTGTGAAGTTACCA AGGATATTCTTGGTCAGTGGACTAATCAGGGCATAAGGTTTAGTCCGGATCCAGATACAT CTATGGGTTTAGTGCAGCATGAGGGTGGGCCCTGTGGGGTGCTAGCAGCAATACAGGCTT TTGTTCTGAAGCACCTATTGTTTTTCTCGGATGATTTAAATATGGTTTCACCTAGCTTGT CTGGCAATGTGGATTCGAGAAGATTGGCTAATAAAGATTCTGCTGGAGCTGATATTTTTT CGTCTCTAAGTGAAGAGAAAAAATCAAGAGCATTGGTAAGAGGCATGTGTGAGATATTGT TTATGTGTGGAAGCAATAGAAGGGTTGTGATAGCATCTTTGAGAACAGTTGAAGCTATCC TTGTGGGGCCTCAGGGCTGTTCAGGTGATGAGGTCATTTCTAAAGCACTTGAAGGTCTCT CAATTGAGTCTGGGGCTAACTTGCAAAAGGCTTTAATCATTAATACGTATACTTCTTCAG AGGATGCTCTTCAAAGGCTTGAAGCATTGCTTCCAGTATTCCGAAGTCGTATGGGAGCAA TGCTGTTCCTAATATCTGCTTTGCTTTCTCATGGAATGGAATCTGTCCAAGCTGATAGGG ATGATCCTTCTCAACCTTTGGTTACAGCACCTTTTGGACATGCTTCACAGGAAATTGTGA ACCTGTTGCTTTCTGGTGAAGCTGTTGCCAATGTGTTTGACGGGAGGATGGATTTGGGTG GTGGCATGTTTGTGAAGGGTATCTCTACAACAGTTGAAGTTGGATTTATTACTCTGCTAG AGTCCCTGAACTTTTGTAAAGTTGGCTTGCATTTGAAATGCCCGGCATGGCCAATATGGG TTGTTGGCAGTGAATCTCATTACACTGTCTTATTTGCTTTAGATACAAAAGTTCAGGAGG AGAATGAACTTGAAGGCAAGGAAACAAAGATCCGTAGAGCTTTTGATGCTCAAGATCAGA GTGGAGGTGGTGGATTTATTAGTGTGGAAGGTTTTCATCAAGTCCTTAGGGATACTAATG TGAATCTTCCAGCTGACAAGCTTCAAAACCTCTGTAGCAGTGGATACATTGTATGGAGTG AATTCTGGCAGGTCCTGTTGGACTTGGACAATAGTTTGGGAGGGCTGAAAGATCCTAGTG GATTAATGGGGAAAAAGGTCTTTGATCTTTACCACTTCAATGGGATTGCAAAATCAGTTA TGAGTGGAAACCAGGTTTCATCCGGAAATGATATTCCGGTACAAAGGCCTAGACTCACTA AGCTGAGGGTTTCAGTTCCCCCAAGGTGGACGCCAGAGGAGTTCATGTCTTCAGGCCCAA GTACAAGTGATCCTGCCGGTAAGGATTCTGTCACTGAAGTTTCAAAACCTGAACCTTCTC AGCATGCTCCATTAGTTGACTGCATCCGGACACGCTGGGCCCGAGCCACATGTACTTGGG AAGGTGATCCACCAAGCATAGTTTGATTGGTTAATTGATTTAGTCTGAAACTGCCACCTT GTTTTCCGGGGGATTATCACGTAGAGCAGGAGCTATATACTTCCGAAAAAGGTGAAAGCT TTCTGAGCAGGAAGATTCTTTTCCTCGTGGCAGTTTTCCATCATGAACATAATGCAGTAC CATTTTCAACTGTGTGATATTGTAACTTCAAGATTCTAGTTTGATTTGGAGTAGTCCAAT TCTGAGGGTAAGAGAGGCAGTATACTGTCATTTCGCATTGATTTTTTCGCCTTATGCTGT TGATTAGTTTTTCTTCCCGTTTCCTCTGAAAGGGAGATAAATAAGCATCAGATTGGTTAT TAATTGTTGTTGTAACTTTAGAAAGCCCCTCTCATCTTCGCACTTGATTAGGGAAAATAT CTTATTCGGAGAAGTGGTCTCAAATACATGGTGTCTATTATTATATTTGTTGATGGATGA AATTCTTTAAAACTCTCTGAATGCTACTATATTTTACCTACACGTGCCCAACTTGTAAAA CATTAAGAAAAGGAATGTAGTAAACTCTCCATGT