Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g071040.3.1
CDS Infomation	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein (AHRD V3.3 *** AT5G42140.2)
Sequence	ATGGTAGTGTACGGACGGCATCTTGTTAGCTATGGTGATGCCGACCGTGATATTGAGCAG GCACTAATTGCTTTAAAGAAAGGAGCTCAACTGTTGAAATATGGACGCAAAGGGAAGCCC AAGTTCTATCCATTTAGACTTTCTAATGATGAATTATCTTTAGTTTGGATCTCTAGCAGT GGTGAAAAGAGTTTAAAGTTAGCTTCAGTTTCTAGAATCATTCCTGGGCAAAGAACTGCT GTCTTTCGACGTTATCTTCGTCCTGATAAGGATTACTTGTCCTTCTCTCTCATATACAAT TACGGAAAAAGATCCCTTGATCTGATCTGTAAGGACAAGGTTGAGGCAGAGTTTTGGATT ACTGGCCTAAAAGCTTTGATATCTTCTGGACAAGGTGGACGCTCAAAGGTTGACGGTTGG AGTGATGGAGGCCTCTACTTTGATGATAGTCGAGATTTGACATCAAACAGTCCAAGTTCT AGTTCTGTTAGTGCTACAAAAGAAATTAGCTCTCCAGACGCTTCCTTAAGTTCCAACCCT AATACTTCTCCTAAGAGCTATCAACCTTATAACTTTGTGCAGTCTGAAAGGTCACATGTA GCTTTGGATCAAGCAAATATGCATAATATTCAAGCCAAAGGATCTGCTCCAGATGTGTTC CGAGTTAGTGTTTCCAGTGCCCCCAGTACTTCTAGTCATGGTTCTGCACCAGATGATTGC GATGCTTTGGGCGATGTTTATATATGGGGTGAGGTAATATGTGATAGTATTGTCAAGGTT GGACCTGAAAAAAATTCCAGTACGGTGAGCACAAGGGCAGATGTGCTTGTTCCAAGACCA CTGGAATCCAATGTAGTTTTGGATGTTCATCATATAGCTTGTGGGGTCAAGCATGCTGCC CTCGTCACCAGGCAAGGTGAAATCTTTACATGGGGTGAAGAATCTGGTGGCCGACTCGGC CATGGTGTTGGGAAAGATGTCACTCAACCTCGGTTTGTCGAATCATTGTCCCTTTGCAAC ATTGACTTTGTAGCATGTGGTGAGTTTCACACCTGCGCTGTTACAATGGCTGGTGAATTA TATACTTGGGGGGATGGCACACACAATGCTGGGCTTCTAGGTAATGGCACTGATGTCAGC CACTGGATACCAAAGAGAATATCAGGCCCTTTGGAAGGACTTCAAGTTGCATCAGTAACA TGCGGTCCATGGCATACTGCTTTAATAACATCAACTGGGCAGCTCTTCACGTTTGGGGAT GGAACATTTGGTGTTTTAGGCCATGGTGATAGGGAAAATGTATTGTTCCCCCGGGAGGTG AAGTCTTTGTCAGGTCTGAGGACAATTGCTGCTGCATGTGGAGTATGGCATACTGCTGCT GTAGTTGAAGTTATTGTGACACAGTCTAGTGCTAGTGTTTCATCTGGAAAATTATTTACT TGGGGAGATGGAGATAAAAACCGTCTTGGACATGGTGATAAAGAACCTCGACTGGAACCT ACTTGTGTACCTGCACTTATTGATTACAATTTTCACAAAATTGCTTGTGGGCATAGTTTA ACTGTCTGCTTGACCACATCTGGCCATGTTTTTACAATGGGAAGTACCGTCTATGGACAA CTTGGAAATCCTTTTTCTGATGGGAAGTTGCCTTGCCTGGTAGAAGACAAACTTTTGGGG GAAATTGTTGAAGATATTGCTTGCGGCTCATACCATGTGGCTGTTTTGACATCCAAAAAT GAGGTTTATACGTGGGGCAAGGGAGCCAACGGGAGATTGGGTCACGGGGATGTAGAGGAC AGGAAAGCCCCCACTTTGGTTGAAGCTTTAAAGGATAGACATGTGAAATATATTTCTTGT GGTTCTAATTACACTGCTGCAATATGTCTTCACAAATGGGTTTCTGGTGCTGAGCAGTCC CAGTGTTCAGCCTGTAGACAGGCTTTTGGCTTCACAAGGAAACGGCACAATTGCTACAAC TGTGGGCTTGTGCATTGCCATGCATGCACTTCAAGAAAAGCAATAAGGGCAGCTTTGGCT CCAAATCCAAACAAACCGTATCGTGTGTGTGATTCTTGTTTTACAAAACTGAGTAAGGTT GCTGAGATTGGAATCAATAACAGGAGAAGTGCCGGACCTCGCCTTTCTGGTGAGAACAAG GACAGGCTGGACAAGGCTGATATACGATCAGCAAAATCAGGAATGCCACCCAATCTTGAT TTGATCAAGCAGCTAGATAGTAAAGCAGTCAAACAAGGGAAAAAAGCTGATACGTTTTCC TTGGGTCGTTCCTCTCAAGCTCCTTTGTTACAGCTGAAAGATGTAGTGTCGACCACTGGA GATCTGCGTTGGGCAGTTCCAAAACCAGTTATGATCCAATCGGGTGTTAGTTCCAGATCT GTGTCACCTTTCTCTAGGAAGCCAAGTCCGCCACGCTCAGCAACACCTGTACCTACCACT GCAGGACTTTCATTCTCCAAAAGCATTGCTGACAGTTTGAAGAAGACCAATGAGCTTTTA AATCAGGAAGTTCACAAACTACGGGCTCAGGTTGAGAACCTGAGACATCGTTGTGAACTT CAGGAGTCGGAGCTGCAGAAATCAACAAAAAAAGCCCAGGAAGCAATGGCTTTGGCAGCC GAGGAATCTGCTAAAAGCAAAGCTGCAAAAGAAGCTATGAAGTCGCTGATGGCACAGCTC AAAGACATGGCTGAAAGGTTGCCACCTGGGGCTTATGACGTAGAGAGCCTCAAACTAGCT TACTTACCGAATGGTTTGGACTCAAATGGCATTCACTATCCCAACGCTAATGGGGAACGC CATTCGAGATCTGATTCTGTCACTAGCTCTTACATGGCCTCTCAAACCAGCATGGATTTT AGTACATATGGAATGCATAGCCCTACCAGATACCAAAGGGATTCTGGTAGCATTGAAGCT ATTTCAAACAATCAAATCCTGACCTCCAATGGTACAGATGACCGAGGTGAAGTTAGACTG CCTAATGGTAGCGAGGCACAGGTGAACATCAATAGTGCATCTCAAGCTGTCGATAATGAA GACGCTGAATCCTTACAAGACAATGGGAACGGATTGAAATCAAGAAATTCTCTGCCTTCT GGTAACCCTAACCAAATTGAGGCTGAATGGATTGAACAATACGAGCCTGGAGTTTATATT ACCCTAATGGCTCTTCGAGATGGCACTAGAGATCTCAAACGAGTTCGCTTCAGCCGCAGA AGATTCGGGGAGCACCAAGCGGAGACTTGGTGGTCAGAGAATCGTGACAAAGTTTACGAG AGATATAATGTTCGTGGTTCAGACAAGTCATCGGTTACAGGTCAGGCTGCTCGGAGGTCA GAAGGGGGCCTCTCTCCATCTTCCCAAATTTAG

Peptide Sequence

PEP ID	Solyc04g071040.3.1
PEP Infomation	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein (AHRD V3.3 *** AT5G42140.2)
Sequence	MVVYGRHLVSYGDADRDIEQALIALKKGAQLLKYGRKGKPKFYPFRLSNDELSLVWISSS GEKSLKLASVSRIIPGQRTAVFRRYLRPDKDYLSFSLIYNYGKRSLDLICKDKVEAEFWI TGLKALISSGQGGRSKVDGWSDGGLYFDDSRDLTSNSPSSSSVSATKEISSPDASLSSNP NTSPKSYQPYNFVQSERSHVALDQANMHNIQAKGSAPDVFRVSVSSAPSTSSHGSAPDDC DALGDVYIWGEVICDSIVKVGPEKNSSTVSTRADVLVPRPLESNVVLDVHHIACGVKHAA LVTRQGEIFTWGEESGGRLGHGVGKDVTQPRFVESLSLCNIDFVACGEFHTCAVTMAGEL YTWGDGTHNAGLLGNGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALITSTGQLFTFGD GTFGVLGHGDRENVLFPREVKSLSGLRTIAAACGVWHTAAVVEVIVTQSSASVSSGKLFT WGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVCLTTSGHVFTMGSTVYGQ LGNPFSDGKLPCLVEDKLLGEIVEDIACGSYHVAVLTSKNEVYTWGKGANGRLGHGDVED RKAPTLVEALKDRHVKYISCGSNYTAAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYN CGLVHCHACTSRKAIRAALAPNPNKPYRVCDSCFTKLSKVAEIGINNRRSAGPRLSGENK DRLDKADIRSAKSGMPPNLDLIKQLDSKAVKQGKKADTFSLGRSSQAPLLQLKDVVSTTG DLRWAVPKPVMIQSGVSSRSVSPFSRKPSPPRSATPVPTTAGLSFSKSIADSLKKTNELL NQEVHKLRAQVENLRHRCELQESELQKSTKKAQEAMALAAEESAKSKAAKEAMKSLMAQL KDMAERLPPGAYDVESLKLAYLPNGLDSNGIHYPNANGERHSRSDSVTSSYMASQTSMDF STYGMHSPTRYQRDSGSIEAISNNQILTSNGTDDRGEVRLPNGSEAQVNINSASQAVDNE DAESLQDNGNGLKSRNSLPSGNPNQIEAEWIEQYEPGVYITLMALRDGTRDLKRVRFSRR RFGEHQAETWWSENRDKVYERYNVRGSDKSSVTGQAARRSEGGLSPSSQI*

Transcript Sequence

Transcript ID	Solyc04g071040.3.1
Transcript Infomation	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein (AHRD V3.3 *** AT5G42140.2)
Sequence	ATGGTAGTGTACGGACGGCATCTTGTTAGCTATGGTGATGCCGACCGTGATATTGAGCAG GCACTAATTGCTTTAAAGAAAGGAGCTCAACTGTTGAAATATGGACGCAAAGGGAAGCCC AAGTTCTATCCATTTAGACTTTCTAATGATGAATTATCTTTAGTTTGGATCTCTAGCAGT GGTGAAAAGAGTTTAAAGTTAGCTTCAGTTTCTAGAATCATTCCTGGGCAAAGAACTGCT GTCTTTCGACGTTATCTTCGTCCTGATAAGGATTACTTGTCCTTCTCTCTCATATACAAT TACGGAAAAAGATCCCTTGATCTGATCTGTAAGGACAAGGTTGAGGCAGAGTTTTGGATT ACTGGCCTAAAAGCTTTGATATCTTCTGGACAAGGTGGACGCTCAAAGGTTGACGGTTGG AGTGATGGAGGCCTCTACTTTGATGATAGTCGAGATTTGACATCAAACAGTCCAAGTTCT AGTTCTGTTAGTGCTACAAAAGAAATTAGCTCTCCAGACGCTTCCTTAAGTTCCAACCCT AATACTTCTCCTAAGAGCTATCAACCTTATAACTTTGTGCAGTCTGAAAGGTCACATGTA GCTTTGGATCAAGCAAATATGCATAATATTCAAGCCAAAGGATCTGCTCCAGATGTGTTC CGAGTTAGTGTTTCCAGTGCCCCCAGTACTTCTAGTCATGGTTCTGCACCAGATGATTGC GATGCTTTGGGCGATGTTTATATATGGGGTGAGGTAATATGTGATAGTATTGTCAAGGTT GGACCTGAAAAAAATTCCAGTACGGTGAGCACAAGGGCAGATGTGCTTGTTCCAAGACCA CTGGAATCCAATGTAGTTTTGGATGTTCATCATATAGCTTGTGGGGTCAAGCATGCTGCC CTCGTCACCAGGCAAGGTGAAATCTTTACATGGGGTGAAGAATCTGGTGGCCGACTCGGC CATGGTGTTGGGAAAGATGTCACTCAACCTCGGTTTGTCGAATCATTGTCCCTTTGCAAC ATTGACTTTGTAGCATGTGGTGAGTTTCACACCTGCGCTGTTACAATGGCTGGTGAATTA TATACTTGGGGGGATGGCACACACAATGCTGGGCTTCTAGGTAATGGCACTGATGTCAGC CACTGGATACCAAAGAGAATATCAGGCCCTTTGGAAGGACTTCAAGTTGCATCAGTAACA TGCGGTCCATGGCATACTGCTTTAATAACATCAACTGGGCAGCTCTTCACGTTTGGGGAT GGAACATTTGGTGTTTTAGGCCATGGTGATAGGGAAAATGTATTGTTCCCCCGGGAGGTG AAGTCTTTGTCAGGTCTGAGGACAATTGCTGCTGCATGTGGAGTATGGCATACTGCTGCT GTAGTTGAAGTTATTGTGACACAGTCTAGTGCTAGTGTTTCATCTGGAAAATTATTTACT TGGGGAGATGGAGATAAAAACCGTCTTGGACATGGTGATAAAGAACCTCGACTGGAACCT ACTTGTGTACCTGCACTTATTGATTACAATTTTCACAAAATTGCTTGTGGGCATAGTTTA ACTGTCTGCTTGACCACATCTGGCCATGTTTTTACAATGGGAAGTACCGTCTATGGACAA CTTGGAAATCCTTTTTCTGATGGGAAGTTGCCTTGCCTGGTAGAAGACAAACTTTTGGGG GAAATTGTTGAAGATATTGCTTGCGGCTCATACCATGTGGCTGTTTTGACATCCAAAAAT GAGGTTTATACGTGGGGCAAGGGAGCCAACGGGAGATTGGGTCACGGGGATGTAGAGGAC AGGAAAGCCCCCACTTTGGTTGAAGCTTTAAAGGATAGACATGTGAAATATATTTCTTGT GGTTCTAATTACACTGCTGCAATATGTCTTCACAAATGGGTTTCTGGTGCTGAGCAGTCC CAGTGTTCAGCCTGTAGACAGGCTTTTGGCTTCACAAGGAAACGGCACAATTGCTACAAC TGTGGGCTTGTGCATTGCCATGCATGCACTTCAAGAAAAGCAATAAGGGCAGCTTTGGCT CCAAATCCAAACAAACCGTATCGTGTGTGTGATTCTTGTTTTACAAAACTGAGTAAGGTT GCTGAGATTGGAATCAATAACAGGAGAAGTGCCGGACCTCGCCTTTCTGGTGAGAACAAG GACAGGCTGGACAAGGCTGATATACGATCAGCAAAATCAGGAATGCCACCCAATCTTGAT TTGATCAAGCAGCTAGATAGTAAAGCAGTCAAACAAGGGAAAAAAGCTGATACGTTTTCC TTGGGTCGTTCCTCTCAAGCTCCTTTGTTACAGCTGAAAGATGTAGTGTCGACCACTGGA GATCTGCGTTGGGCAGTTCCAAAACCAGTTATGATCCAATCGGGTGTTAGTTCCAGATCT GTGTCACCTTTCTCTAGGAAGCCAAGTCCGCCACGCTCAGCAACACCTGTACCTACCACT GCAGGACTTTCATTCTCCAAAAGCATTGCTGACAGTTTGAAGAAGACCAATGAGCTTTTA AATCAGGAAGTTCACAAACTACGGGCTCAGGTTGAGAACCTGAGACATCGTTGTGAACTT CAGGAGTCGGAGCTGCAGAAATCAACAAAAAAAGCCCAGGAAGCAATGGCTTTGGCAGCC GAGGAATCTGCTAAAAGCAAAGCTGCAAAAGAAGCTATGAAGTCGCTGATGGCACAGCTC AAAGACATGGCTGAAAGGTTGCCACCTGGGGCTTATGACGTAGAGAGCCTCAAACTAGCT TACTTACCGAATGGTTTGGACTCAAATGGCATTCACTATCCCAACGCTAATGGGGAACGC CATTCGAGATCTGATTCTGTCACTAGCTCTTACATGGCCTCTCAAACCAGCATGGATTTT AGTACATATGGAATGCATAGCCCTACCAGATACCAAAGGGATTCTGGTAGCATTGAAGCT ATTTCAAACAATCAAATCCTGACCTCCAATGGTACAGATGACCGAGGTGAAGTTAGACTG CCTAATGGTAGCGAGGCACAGGTGAACATCAATAGTGCATCTCAAGCTGTCGATAATGAA GACGCTGAATCCTTACAAGACAATGGGAACGGATTGAAATCAAGAAATTCTCTGCCTTCT GGTAACCCTAACCAAATTGAGGCTGAATGGATTGAACAATACGAGCCTGGAGTTTATATT ACCCTAATGGCTCTTCGAGATGGCACTAGAGATCTCAAACGAGTTCGCTTCAGCCGCAGA AGATTCGGGGAGCACCAAGCGGAGACTTGGTGGTCAGAGAATCGTGACAAAGTTTACGAG AGATATAATGTTCGTGGTTCAGACAAGTCATCGGTTACAGGTCAGGCTGCTCGGAGGTCA GAAGGGGGCCTCTCTCCATCTTCCCAAATTTAGAAATTCGTTAGTCAATCTGTCTTAGCA AATCTCTGTCTACCTTTTTTTGATTATTGTGGTGCGGAATGCTAGTCAAATTATTGGAGG GGAGAGAGCCAAAACCCTCGACGTCATTCCACAAATTCCTGAGCCTTTTTGTTTTGTGTT ACTTTTTGGTTCAGTGTTATTTCTTAGGGGGTTGGTTCACCATTTTAACTTATTTGTTGT TGTATTGTAGTGTATATAATAGTATCAATCAATTATATTTGTTGCCCAACATGACTTGTG TTCGTTTCCCTTTATTTGGTGAAAAAAAAGAGTAAGAGAG