Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g071030.1.1
CDS Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HEI4_POPTR)
Sequence

ATGGTGAGAAATAGGAGAGAAGAATTATACGTTACCGTTCCCCCACTTTTCCGATGTCCG
ATATCCATGGACGTAATGAAGTCTCCGATAAGTCTCTGCACCGGCGTCACTTACGATCGG
AGTTCCATTCAAACTTGGCTTTCACAAGGTCATAATACTTGTCCCGCTACTATGCAAATC
CTTCCGTCTACGGATTTCACACCTAACCTCACTCTCCGGAGGCTTATCAATGTCTGGATA
CAGCATCAGCCGGCGAGTTCACCAGGATCCACAACGCCGTCTTCATCCTCTGTTACAAAA
ACGGAAGTTGTTGAAATTGTTGAAAATCTCAACGGCGAGGTCGATAGGTTGAGTTCCTTG
GCGAAGATTGGGGAATTTGTTAAATGTTCTGGTGAAAACAGGAGTTTTTTTGTGAATTTG
AGTGATGCGATTGCGAATATTGTTGGAGTTTTGGTGGATTGTGATGTGGTTGAGGTTTGT
GAAGCGGTTGTTGCGGTTTTGGATTTAGTTGTATCGGAGAATGGAGTTAAGGAGCAGTTG
AACAAAGAGATTTTGAAGAGCGATCAGAAATTTCTACCGAAGTTTCTTTTGGTTCTTCGT
AAAGGAAAGTTGAGTTCGAGGATTCAAACCGCTCGGATTCTAGAATTCATCGCATTAGAC
GCCGATTCACAGCGAAAAATGGTCGAGGAGCAAGGTTTACTCTACGAATTGCACGTATTC
ACTAGCACGGAGACGAACCGATTCGCGATCGAAGTCGGTTTATCAACTCTAATCGCGGTC
TCAACCACCAGACTGGCGAAGAAAGAGCTAGTCCGGTTCGGAATTATACAAACTATCGGA
AAAATCCTTAGCGATTCGGAAACCGCTCGGGCGGTGGTAGAGAAGTCATTGAAGCTGTTG
GAAACAGTAGCGACGTGTGCAGAAGGCAGGACGGCGATAGGTAAAGGCGAAGAGTGCTTG
TCGGCGATAGTTACAAGGCTGATGAAGAGCTCGAAAGCAGCGACGGAGCACGGGGTGACA
GTACTATGGAGCGTGTGCTGTTTGTTTCGTCATACGGCGGCGCGTGAGGTAGTGGGAAAG
GCAAATGGGCTAACAAAAGTGTTGCTGGTAATGCAGAGTGATTGCTCCGCGGCGGTACGG
CAGATGTGTGGGGAATTAGTGAAAGCATTGCGCGTGGTGAATACTTTCTCTGTCCGGACG
GAGGAAGTAATAAAGATAAAGAATTATTCAAAGTCGTGTTTGGCGAGTTATGATACCCAA
ACTACTCACATTATGCCCTACTGA

Peptide Sequence

PEP ID

Solyc04g071030.1.1
PEP Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HEI4_POPTR)
Sequence

MVRNRREELYVTVPPLFRCPISMDVMKSPISLCTGVTYDRSSIQTWLSQGHNTCPATMQI
LPSTDFTPNLTLRRLINVWIQHQPASSPGSTTPSSSSVTKTEVVEIVENLNGEVDRLSSL
AKIGEFVKCSGENRSFFVNLSDAIANIVGVLVDCDVVEVCEAVVAVLDLVVSENGVKEQL
NKEILKSDQKFLPKFLLVLRKGKLSSRIQTARILEFIALDADSQRKMVEEQGLLYELHVF
TSTETNRFAIEVGLSTLIAVSTTRLAKKELVRFGIIQTIGKILSDSETARAVVEKSLKLL
ETVATCAEGRTAIGKGEECLSAIVTRLMKSSKAATEHGVTVLWSVCCLFRHTAAREVVGK
ANGLTKVLLVMQSDCSAAVRQMCGELVKALRVVNTFSVRTEEVIKIKNYSKSCLASYDTQ
TTHIMPY*

Transcript Sequence

Transcript ID

Solyc04g071030.1.1
Transcript Infomation

U-box domain-containing family protein (AHRD V3.3 *** B9HEI4_POPTR)
Sequence

ATGGTGAGAAATAGGAGAGAAGAATTATACGTTACCGTTCCCCCACTTTTCCGATGTCCG
ATATCCATGGACGTAATGAAGTCTCCGATAAGTCTCTGCACCGGCGTCACTTACGATCGG
AGTTCCATTCAAACTTGGCTTTCACAAGGTCATAATACTTGTCCCGCTACTATGCAAATC
CTTCCGTCTACGGATTTCACACCTAACCTCACTCTCCGGAGGCTTATCAATGTCTGGATA
CAGCATCAGCCGGCGAGTTCACCAGGATCCACAACGCCGTCTTCATCCTCTGTTACAAAA
ACGGAAGTTGTTGAAATTGTTGAAAATCTCAACGGCGAGGTCGATAGGTTGAGTTCCTTG
GCGAAGATTGGGGAATTTGTTAAATGTTCTGGTGAAAACAGGAGTTTTTTTGTGAATTTG
AGTGATGCGATTGCGAATATTGTTGGAGTTTTGGTGGATTGTGATGTGGTTGAGGTTTGT
GAAGCGGTTGTTGCGGTTTTGGATTTAGTTGTATCGGAGAATGGAGTTAAGGAGCAGTTG
AACAAAGAGATTTTGAAGAGCGATCAGAAATTTCTACCGAAGTTTCTTTTGGTTCTTCGT
AAAGGAAAGTTGAGTTCGAGGATTCAAACCGCTCGGATTCTAGAATTCATCGCATTAGAC
GCCGATTCACAGCGAAAAATGGTCGAGGAGCAAGGTTTACTCTACGAATTGCACGTATTC
ACTAGCACGGAGACGAACCGATTCGCGATCGAAGTCGGTTTATCAACTCTAATCGCGGTC
TCAACCACCAGACTGGCGAAGAAAGAGCTAGTCCGGTTCGGAATTATACAAACTATCGGA
AAAATCCTTAGCGATTCGGAAACCGCTCGGGCGGTGGTAGAGAAGTCATTGAAGCTGTTG
GAAACAGTAGCGACGTGTGCAGAAGGCAGGACGGCGATAGGTAAAGGCGAAGAGTGCTTG
TCGGCGATAGTTACAAGGCTGATGAAGAGCTCGAAAGCAGCGACGGAGCACGGGGTGACA
GTACTATGGAGCGTGTGCTGTTTGTTTCGTCATACGGCGGCGCGTGAGGTAGTGGGAAAG
GCAAATGGGCTAACAAAAGTGTTGCTGGTAATGCAGAGTGATTGCTCCGCGGCGGTACGG
CAGATGTGTGGGGAATTAGTGAAAGCATTGCGCGTGGTGAATACTTTCTCTGTCCGGACG
GAGGAAGTAATAAAGATAAAGAATTATTCAAAGTCGTGTTTGGCGAGTTATGATACCCAA
ACTACTCACATTATGCCCTACTGA