Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g064820.3.1
CDS Infomation	vacuolar protein sorting 45 (AHRD V3.3 *** AT1G77140.1)
Sequence	ATGGTACTTGTAGCAGCGGTGAGGGACTATATCAATCGCATATTGCAAGACATTTCTGGG ATGAAAGTCCTCATTCTTGATTCTTCTACGGTTAGTTCTGTTAGTGTTGTGTACTCTCAG TCAGAGCTTCTGAAGAAGGAGGTGTTCCTGGTGGAGCTGGTAGATTCTATTGCCATGTCC AAAGAATCCATGTCACATCTTAAAGCAGTTTATTTTCTGAGGCCAACATCAGAGAATATC CAGCATATGCGTCGTCAACTAGCTAAGCCACGATTTGGAGAATATCACCTTTTTTTCTCC AATATTTTGAAAGATACGCAACTTCATATGCTAGCCGATTCAGATGAGCATGAAGTTGTC CAGCAGTTGCAGGAATTTTATGCAGATTTTGTTGCGTTGGACCCTTACCATTTCACGTTA AATATGGCCGCAAACCACATGTATATGCTCCCAGCAGTTGTAGATCCATCAGGATTGCAG CAGTTCTGTGATCGAATCGTTGATGGAATGTCTGCAGTTTTCTTGGCGTTAAAGCGAAGG CCTATTATTCGATATTCAAGGACATCTGATATTGCGAAAAGAATAGCACATGAAGCTTCT AAGCTGATGTACCAGCAGGAGAGTGGCCTTTTTGATTTCAGAAGAACAGAAGTGTCTCCG TTGTTGCTAATAATTGATAGGCGGGATGACCCCGTGACTGCACTTCTTAATCAGTGGACC TATCAGGCAATGGTTCATGAGTTGATTGGTATTCAAGATAATAAGGTCAACCTGAAAAAC GTTGGCAAGTTGCCAAAAGATCAACAGGAGGTTGTACTGTCATCTGAGCAAGATGCATTT TTCAAAGCAAATATGTATGAGAACTTCGGAGATATTGGAATGAATATTAAGAAAATGGTG GACGACTTCCAACAAGTGGCAAAAAGTAACCAGAATATCCAGACGATAGAGGACATGGCT AAATTTGTAGACAACTACCCAGAATACCGAAAAATGCAAGGGAATGTTTCTAAGCACGTG ACACTGGTTACGGAAATGAGCAAAATAGTTGAAGAGCGAAAACTGATGTTGGTTTCACAG ACGGAACAAGAGTTGGCTTGCAATGGTGGACAAGGGGCAGCATTCGAGGCTGTGACAAAT CTATTGAATAATGATAATATCTCTGATGTTGACCGCCTGCGCCTTGTCATGCTGTACGCC TTGCGCTATGAGAAGGAGAGTCCTGTTCAACTAATGCAGCTATTCAACAAATTAGCATCT CGGTCGCCCAAGTATAAGCCTGGGCTAGTGCAATTCCTTCTAAAGCAAGCAGGAGTTGAT AAGAGAACTGGAGATCTGTACGGGAACAGAGATCTCCTGAACATTGCACGTAACATGGCT CGTGGGCTCAAGGGGGTTGAGAATGTGTATACCCAGCATCAACCACTTCTATTCCAAACT ATGGAGAACATCACCAGGGGTCGACTGAGAGATGTGGACTACCCTTATGTAGGAAATCAC TTTCAGCAAGCAAGGCCACAGGAAGTGGTGATTTTCGTTGTTGGTGGGACAACATATGAA GAGTCACGTTCGGTTGCTCTACAGAACTCTACGAACTCTGGCATTCGTTTTATACTTGGT GGTTCTTCCCTTCTAAATTCTAAAAGATTCTTGAAGGACCTTGAAGAAGCTCAGAGAATC GCTCGTATAAGCACCAATATGCTTTGA

Peptide Sequence

PEP ID	Solyc04g064820.3.1
PEP Infomation	vacuolar protein sorting 45 (AHRD V3.3 *** AT1G77140.1)
Sequence	MVLVAAVRDYINRILQDISGMKVLILDSSTVSSVSVVYSQSELLKKEVFLVELVDSIAMS KESMSHLKAVYFLRPTSENIQHMRRQLAKPRFGEYHLFFSNILKDTQLHMLADSDEHEVV QQLQEFYADFVALDPYHFTLNMAANHMYMLPAVVDPSGLQQFCDRIVDGMSAVFLALKRR PIIRYSRTSDIAKRIAHEASKLMYQQESGLFDFRRTEVSPLLLIIDRRDDPVTALLNQWT YQAMVHELIGIQDNKVNLKNVGKLPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKKMV DDFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMQGNVSKHVTLVTEMSKIVEERKLMLVSQ TEQELACNGGQGAAFEAVTNLLNNDNISDVDRLRLVMLYALRYEKESPVQLMQLFNKLAS RSPKYKPGLVQFLLKQAGVDKRTGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQT MENITRGRLRDVDYPYVGNHFQQARPQEVVIFVVGGTTYEESRSVALQNSTNSGIRFILG GSSLLNSKRFLKDLEEAQRIARISTNML*

Transcript Sequence

Transcript ID	Solyc04g064820.3.1
Transcript Infomation	vacuolar protein sorting 45 (AHRD V3.3 *** AT1G77140.1)
Sequence	ACACTTCTAATAAAAACTTTTTTGTAAAATAAAATAAATAGTTAAAGGAGTATATTATAA CAATAACAAAGATTGAAAATTATACTGAACCATGTAAGATTTCTTCCAAGCAACAATATG ATTTTTCCCTCTCAACTGCATAATAAATATAGTCCACCAATATTCAACCACCTGTTAATT ATTCAATCATTCTTTTATATATGATAAATAATATAGAAGAAAAAATACATGTATTAAACA ATACTAAAATTAAGCAAAATTTTTATGTAGTCTGTATAATTTCCATTTCATTCCCATATA ATAATGTGACCACATATAAATATAAAATAACCTCTCTATAGCTTGTCAATAAATCAAACT ATATCTTATTTCCTCTTTATCAATTTATATACTAACTTTTATTATTTGAGAAGTCAAATT ATTTTTATTTTGAGTAAGTTCTTTTAAAACATTTTCCATTTAATCTCATTTTTTTGGTCA TTTCTTAATGGACAAATTATACTTAATGAAAAATTAAAACCAACACAAAAAAAATAAATT ATTCAAAGTTATTCTGTTCTCATCAAAATGTGGTACGGATGATGAATAACTCTGATTTTT TCTTTAATCGAAAGACTCGATTTTAAATCTAAATATTTTAAGTAGAAAATACTTTTCTGA AATATGAAAATTTAAATTAATACGATTTTAAAGACAGATAGACACTTAATAAAAATCAAA TAAAATGGAAATGATTTTTTTTTAATAGAAAACTTAACTGGGTCAGTTTACGACCAATCT TTTTTATTTTTCTTCATCAAACTCCTCAATGTTCTTTAATTCCCTCCAAAGATTAGCTGA GATCTGAAACAATTTTTTCCACTGAATTCACCAGATCAATTTCTCTGCATATTTTTGGAT TTGTATTGCTGAAATCATACAAGGAATTTAAAAAAAAATGGTACTTGTAGCAGCGGTGAG GGACTATATCAATCGCATATTGCAAGACATTTCTGGGATGAAAGTCCTCATTCTTGATTC TTCTACGGTTAGTTCTGTTAGTGTTGTGTACTCTCAGTCAGAGCTTCTGAAGAAGGAGGT GTTCCTGGTGGAGCTGGTAGATTCTATTGCCATGTCCAAAGAATCCATGTCACATCTTAA AGCAGTTTATTTTCTGAGGCCAACATCAGAGAATATCCAGCATATGCGTCGTCAACTAGC TAAGCCACGATTTGGAGAATATCACCTTTTTTTCTCCAATATTTTGAAAGATACGCAACT TCATATGCTAGCCGATTCAGATGAGCATGAAGTTGTCCAGCAGTTGCAGGAATTTTATGC AGATTTTGTTGCGTTGGACCCTTACCATTTCACGTTAAATATGGCCGCAAACCACATGTA TATGCTCCCAGCAGTTGTAGATCCATCAGGATTGCAGCAGTTCTGTGATCGAATCGTTGA TGGAATGTCTGCAGTTTTCTTGGCGTTAAAGCGAAGGCCTATTATTCGATATTCAAGGAC ATCTGATATTGCGAAAAGAATAGCACATGAAGCTTCTAAGCTGATGTACCAGCAGGAGAG TGGCCTTTTTGATTTCAGAAGAACAGAAGTGTCTCCGTTGTTGCTAATAATTGATAGGCG GGATGACCCCGTGACTGCACTTCTTAATCAGTGGACCTATCAGGCAATGGTTCATGAGTT GATTGGTATTCAAGATAATAAGGTCAACCTGAAAAACGTTGGCAAGTTGCCAAAAGATCA ACAGGAGGTTGTACTGTCATCTGAGCAAGATGCATTTTTCAAAGCAAATATGTATGAGAA CTTCGGAGATATTGGAATGAATATTAAGAAAATGGTGGACGACTTCCAACAAGTGGCAAA AAGTAACCAGAATATCCAGACGATAGAGGACATGGCTAAATTTGTAGACAACTACCCAGA ATACCGAAAAATGCAAGGGAATGTTTCTAAGCACGTGACACTGGTTACGGAAATGAGCAA AATAGTTGAAGAGCGAAAACTGATGTTGGTTTCACAGACGGAACAAGAGTTGGCTTGCAA TGGTGGACAAGGGGCAGCATTCGAGGCTGTGACAAATCTATTGAATAATGATAATATCTC TGATGTTGACCGCCTGCGCCTTGTCATGCTGTACGCCTTGCGCTATGAGAAGGAGAGTCC TGTTCAACTAATGCAGCTATTCAACAAATTAGCATCTCGGTCGCCCAAGTATAAGCCTGG GCTAGTGCAATTCCTTCTAAAGCAAGCAGGAGTTGATAAGAGAACTGGAGATCTGTACGG GAACAGAGATCTCCTGAACATTGCACGTAACATGGCTCGTGGGCTCAAGGGGGTTGAGAA TGTGTATACCCAGCATCAACCACTTCTATTCCAAACTATGGAGAACATCACCAGGGGTCG ACTGAGAGATGTGGACTACCCTTATGTAGGAAATCACTTTCAGCAAGCAAGGCCACAGGA AGTGGTGATTTTCGTTGTTGGTGGGACAACATATGAAGAGTCACGTTCGGTTGCTCTACA GAACTCTACGAACTCTGGCATTCGTTTTATACTTGGTGGTTCTTCCCTTCTAAATTCTAA AAGATTCTTGAAGGACCTTGAAGAAGCTCAGAGAATCGCTCGTATAAGCACCAATATGCT TTGAATTTTGGACTCTACAGTACCTTGTGAAAATCTGAAAATATAGAATCACAGTCTAAA TGGGGATACTTGGATTCTGCAGAAGTACATAACGAGCTGAGTTTGCTGATGAAAATTCCC ATAAATACATTGTGTAGCCACTGTAATCATCGTCTTTCATAGCTTCCGCGTTCTGCCCAA GTGAGACGGTTTTGAGACCACCTCATCTGTGTGCCACTTTTCATGTCTAGATTTGTTGTG TACATGTAGTGTTCTCATATTCCTAAGATACTTCTCTTGACTTGTAGTCTTGTAGCATAT CTGTTCTCATGTCCCGACTGTTATTTGGAATCACATAAAGCTTACATATGGTACAGTACA TCTTACAGTAGTTTCTGTGAAGGTAGTTATTTAATGTTATGTTTATTTGTCCCCTTTGAT TTTTTTTAAGTAGCCAAT