Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g063350.3.1
CDS Infomation

Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *** A0A178WNY2_ARATH)
Sequence

ATGGCAAATTTGATTTCAAAATCAACAAAATTTAACCATTTTCTTCAAAACACAAGAGTT
TGTTTCTTACGATCGTTTACAACTTCTGCCGCCGGCGCCGGTGCTGGTGGTTATATTCAG
CCGGCGGGGAGTTTTTCCGGCGAGTCTGCCGCCATTTTTCGGCCGGAACGTTACCAGTCC
GGTAAAGCTGGAGAGCAACTAGATACAATTGACTATGAAGAAGATGAAAATCAGGTGATG
GATTTTCCTGGTGGAAAAGTTCCAATTACTCCTCAAATGAAATTTATTTCGGAGTCGTCT
GAGAAGAGATTACCTTGTTATAGAGTTCTTGATGATGATGGTTATCCACTTCCAGGGACA
ATCTTTGAGGAGGTGAGCAAAGAATTGGCAATAAAGATGTATAGTTCAATGGTGACACTT
CAAACTATGGATACCATTTTTTATGAAGCGCAAAGGCAGGGGAGGTTGTCGTTCTATCTC
ACAACTGCTGGAGAAGAAGCTATCAACGTAGCATCTGCTGCTGCTCTTTCCTTAGACGAC
TTCGTGTTACCTCAGTACAGGGAAGTAGGGGTTATATTATGGCGTGGTTACCCCTTGGAA
CAGGTTGCCAATCAATTGTTCGGAAACAAGTTTGATTATGGAAAAGGAAGGCAAATGCCC
TGCCACTATGGTTCTAATGAGCTCAACTACTTAACTGTTTCTTCGCCAATAGCAACACAG
ATTCCTCAGGCCGTGGGCGTTGCTTATTCCCTCAAAATGGAAAAAAAGGAGGCTTGCGCG
GTCACTTATTTTGGAGATGGTAGCACCAGTGAGGGAGATTTTCATGCAGCATTAAACTTT
GCAGCAGTATTGGATGCTCCTGTTGTCTTTATATGCCGCAACAATGGATGGGCCATTAGC
ACTCCTATAAACCAACAATTTCGAAGTGACGGAATCGCCTCTAGAGGACAAGCGTATGGT
GTTAGAAGCATTCGTGTAGATGGCAACGATGCCTTGGCAACTTATAGTGCTATTCGTGCA
GCTCGCCAAATGGCAATTAAGGAACAAAGGCCAATATTAGTAGAGGCCATGACATATAGA
GTAGCTCACCATTCAACATCTGATGATTCAACCAAGTATCGACCCGTTGAGGAAATCGAA
CACTGGAAGACAGCAAAAAGCCCTATATCAAAATTCAGAAAATACATTCAAAGAAATGGC
TGGTGGAATGATGAAAATGAATCAGAACTTCGCGGAGACATCAGAAAACAGGTGTTGCAA
GCTATTCAAGCAGCAGAGAAGGTGGATAAACCTTCATTGAAAGATTTGTTTACAGATGTT
TATGACAAAATGCCATTAAATCTTCAAGATCAAGAGAAATTTGTTAAGGATGCTGTAAAA
AGATCTCCAAAAGAATATCCTTCTGATGTTCCTATATAA

Peptide Sequence

PEP ID

Solyc04g063350.3.1
PEP Infomation

Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *** A0A178WNY2_ARATH)
Sequence

MANLISKSTKFNHFLQNTRVCFLRSFTTSAAGAGAGGYIQPAGSFSGESAAIFRPERYQS
GKAGEQLDTIDYEEDENQVMDFPGGKVPITPQMKFISESSEKRLPCYRVLDDDGYPLPGT
IFEEVSKELAIKMYSSMVTLQTMDTIFYEAQRQGRLSFYLTTAGEEAINVASAAALSLDD
FVLPQYREVGVILWRGYPLEQVANQLFGNKFDYGKGRQMPCHYGSNELNYLTVSSPIATQ
IPQAVGVAYSLKMEKKEACAVTYFGDGSTSEGDFHAALNFAAVLDAPVVFICRNNGWAIS
TPINQQFRSDGIASRGQAYGVRSIRVDGNDALATYSAIRAARQMAIKEQRPILVEAMTYR
VAHHSTSDDSTKYRPVEEIEHWKTAKSPISKFRKYIQRNGWWNDENESELRGDIRKQVLQ
AIQAAEKVDKPSLKDLFTDVYDKMPLNLQDQEKFVKDAVKRSPKEYPSDVPI*

Transcript Sequence

Transcript ID

Solyc04g063350.3.1
Transcript Infomation

Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 *** A0A178WNY2_ARATH)
Sequence

ACTTATAAATACACACTCAACCAAAAAAAAAATTAGAACTAAAACCCAATGCATATCAAC
TTCTCCCTTTGAGTTCATTTGTTATCACAATCCATTTAACCTTTTTTTTTGTTCAAACAA
AATTATTATCAATGGCAAATTTGATTTCAAAATCAACAAAATTTAACCATTTTCTTCAAA
ACACAAGAGTTTGTTTCTTACGATCGTTTACAACTTCTGCCGCCGGCGCCGGTGCTGGTG
GTTATATTCAGCCGGCGGGGAGTTTTTCCGGCGAGTCTGCCGCCATTTTTCGGCCGGAAC
GTTACCAGTCCGGTAAAGCTGGAGAGCAACTAGATACAATTGACTATGAAGAAGATGAAA
ATCAGGTGATGGATTTTCCTGGTGGAAAAGTTCCAATTACTCCTCAAATGAAATTTATTT
CGGAGTCGTCTGAGAAGAGATTACCTTGTTATAGAGTTCTTGATGATGATGGTTATCCAC
TTCCAGGGACAATCTTTGAGGAGGTGAGCAAAGAATTGGCAATAAAGATGTATAGTTCAA
TGGTGACACTTCAAACTATGGATACCATTTTTTATGAAGCGCAAAGGCAGGGGAGGTTGT
CGTTCTATCTCACAACTGCTGGAGAAGAAGCTATCAACGTAGCATCTGCTGCTGCTCTTT
CCTTAGACGACTTCGTGTTACCTCAGTACAGGGAAGTAGGGGTTATATTATGGCGTGGTT
ACCCCTTGGAACAGGTTGCCAATCAATTGTTCGGAAACAAGTTTGATTATGGAAAAGGAA
GGCAAATGCCCTGCCACTATGGTTCTAATGAGCTCAACTACTTAACTGTTTCTTCGCCAA
TAGCAACACAGATTCCTCAGGCCGTGGGCGTTGCTTATTCCCTCAAAATGGAAAAAAAGG
AGGCTTGCGCGGTCACTTATTTTGGAGATGGTAGCACCAGTGAGGGAGATTTTCATGCAG
CATTAAACTTTGCAGCAGTATTGGATGCTCCTGTTGTCTTTATATGCCGCAACAATGGAT
GGGCCATTAGCACTCCTATAAACCAACAATTTCGAAGTGACGGAATCGCCTCTAGAGGAC
AAGCGTATGGTGTTAGAAGCATTCGTGTAGATGGCAACGATGCCTTGGCAACTTATAGTG
CTATTCGTGCAGCTCGCCAAATGGCAATTAAGGAACAAAGGCCAATATTAGTAGAGGCCA
TGACATATAGAGTAGCTCACCATTCAACATCTGATGATTCAACCAAGTATCGACCCGTTG
AGGAAATCGAACACTGGAAGACAGCAAAAAGCCCTATATCAAAATTCAGAAAATACATTC
AAAGAAATGGCTGGTGGAATGATGAAAATGAATCAGAACTTCGCGGAGACATCAGAAAAC
AGGTGTTGCAAGCTATTCAAGCAGCAGAGAAGGTGGATAAACCTTCATTGAAAGATTTGT
TTACAGATGTTTATGACAAAATGCCATTAAATCTTCAAGATCAAGAGAAATTTGTTAAGG
ATGCTGTAAAAAGATCTCCAAAAGAATATCCTTCTGATGTTCCTATATAAGCTTATAGTG
TGTTATGATAAGGGGCAGAGCTACAGCTTCGCAATCAATTCATTCGTGTTGCGTAATATG
TATAATTAATTAATTAGTAAACTCTGAATCAAAAACTCGTAAACTCAAAATCTCAACTCG
GTTTCTGAATAGCTAGCTAGAAAGCAACTCTGAAATTGTCAGGTTCTATGAAGTTATATA
TATAAATAGCTACATTATAAACAAAAGTTCTGAAACAAATTCTTGAGTATATGTTAATGG
CATTAACTTTCTCTCTGTTTAATCTCATGATTTTACGTGAAGTATGT