Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g058140.3.1
CDS Infomation

GTPase obg (AHRD V3.3 *** A0A1D1XZG9_9ARAE)
Sequence

ATGTCATTGAGCCAGAAAGTCCTCTACTTGAAGGCTTGGCAAAGATGCTTGCGGTCTCCA
TGGCTAATCCAAACCTATTCTTTCTCAGACATTGTCCACAAGAAAATGAAGCTTGCTCCT
CTACAGGAACGTAGAATGATTGACCGCTTTCGCATATGGGCCAAAGGAGGTGATGGTGGC
AACGGTTGTAACAGTATTCGTCGTAGTCGACATGATCGCCGTGGCAGACCTGATGGTGGG
AATGGTGGAAGGGGCGGTGACGTGATATTAGAATGTTCCCCTACAATGTGGGATTTGAGT
GCTCTGCAGCATCACATTAATGCAAAGAGAGGCGGAAATGGGTCTTCCAAAAATATGATA
GGAAGCAGAGGAGCAGACAAGGTGATCCAAGTTCCTGTGGGTACCGTCATTCATCTAGTA
GAGGGTGAACTTCCATCTGCAGTAGAGAAGAGTTCAAGTTCTAAGTTGGACCCTTGGGAG
ATTCCAGGTACAGTTGATATTGATTCATCAGAGTTTTCTACACAATCAATTTCGGCCGAG
CAAACCAGTTCAAAAGTTGAGAAGAAAATCAAATCGAGTGGATGTCGAGCTTCTCGTGCT
GAAGAATACTCTACACCGAGGACTCAAAATTTTGGTTTGCCCACCAATTCCCGCACTACG
TGCTCAATTGCTAGCGACAAATTCGAAAGTGATGATGATGATTTGAGTGACTGGGAGGAA
GAAAGCTGTGACGAAATGGAAGATCAAGATGGTGATGATATTATGGGAACAACATGTGAA
GATGAGTCGGAAGAAACTGAACTTATAGAATATAATGTTGCAGAGTTAACAGAACAAGGC
CAACGAATAGTTGTTGCTCGTGGAGGGGAGGGTGGCTTAGGCAATCTGTCTATGAGGAAA
GCATCAAAGATTACGCAGAAGGGAGCCAATTCTGATGATGAAGTATCTGATGATTATGAT
CATGCATCACCAAGTGTTGGCTTGCCTGGCTCAGAGGTGGTACTTGTGCTAGAACTAAAG
AGCATTGCTGATGTGGGTCTTATTGGGATGCCAAACGCCGGCAAAAGCACCCTTCTTGGG
GCGTTGTCGAAGGCTAAACCAGTTGTCGGTGATTATGCATTCACAACATTGAGGCCTAAC
TTAGGTAACGTAAATTACTACGATTTTTCTTTAACTGTAGCTGACATCCCAGGACTCATA
AGAGGAGCCCATGAGAATCGTGGTCTTGGGCATGCTTTCCTTCGGCACATAGAACGTACA
AAAGTTCTAGCCTATGTGGTGGACTTGGCTGCAGCACTGGGTGATAACAAGGGAATACCA
CCATGGGAACAGCTAAATGACTTGATTTTGGAACTCGAGTACTATTCTGAGGGTTTATCT
GATCGACCATCCTTAGTGGTGGCTAACAAAGTTGACGAAGACGGGGCTGAAGAGGTATAT
AAAGAACTCAAACGCCGTGTATCTGGTGTGCCCGTTTTCCCAGTTAGTGCAATCTTAGAG
GAAGGAGTACCAGAACTGAAAGATGGTTTGAGGATGCTTATCAGCGGTGAACAAACACAC
AGGCTACAATTAGATGGTATAGTTCTTCACCAAGATGCTGCTCATGTGAGTATCTAG

Peptide Sequence

PEP ID

Solyc04g058140.3.1
PEP Infomation

GTPase obg (AHRD V3.3 *** A0A1D1XZG9_9ARAE)
Sequence

MSLSQKVLYLKAWQRCLRSPWLIQTYSFSDIVHKKMKLAPLQERRMIDRFRIWAKGGDGG
NGCNSIRRSRHDRRGRPDGGNGGRGGDVILECSPTMWDLSALQHHINAKRGGNGSSKNMI
GSRGADKVIQVPVGTVIHLVEGELPSAVEKSSSSKLDPWEIPGTVDIDSSEFSTQSISAE
QTSSKVEKKIKSSGCRASRAEEYSTPRTQNFGLPTNSRTTCSIASDKFESDDDDLSDWEE
ESCDEMEDQDGDDIMGTTCEDESEETELIEYNVAELTEQGQRIVVARGGEGGLGNLSMRK
ASKITQKGANSDDEVSDDYDHASPSVGLPGSEVVLVLELKSIADVGLIGMPNAGKSTLLG
ALSKAKPVVGDYAFTTLRPNLGNVNYYDFSLTVADIPGLIRGAHENRGLGHAFLRHIERT
KVLAYVVDLAAALGDNKGIPPWEQLNDLILELEYYSEGLSDRPSLVVANKVDEDGAEEVY
KELKRRVSGVPVFPVSAILEEGVPELKDGLRMLISGEQTHRLQLDGIVLHQDAAHVSI*

Transcript Sequence

Transcript ID

Solyc04g058140.3.1
Transcript Infomation

GTPase obg (AHRD V3.3 *** A0A1D1XZG9_9ARAE)
Sequence

ATGTCATTGAGCCAGAAAGTCCTCTACTTGAAGGCTTGGCAAAGATGCTTGCGGTCTCCA
TGGCTAATCCAAACCTATTCTTTCTCAGACATTGTCCACAAGAAAATGAAGCTTGCTCCT
CTACAGGAACGTAGAATGATTGACCGCTTTCGCATATGGGCCAAAGGAGGTGATGGTGGC
AACGGTTGTAACAGTATTCGTCGTAGTCGACATGATCGCCGTGGCAGACCTGATGGTGGG
AATGGTGGAAGGGGCGGTGACGTGATATTAGAATGTTCCCCTACAATGTGGGATTTGAGT
GCTCTGCAGCATCACATTAATGCAAAGAGAGGCGGAAATGGGTCTTCCAAAAATATGATA
GGAAGCAGAGGAGCAGACAAGGTGATCCAAGTTCCTGTGGGTACCGTCATTCATCTAGTA
GAGGGTGAACTTCCATCTGCAGTAGAGAAGAGTTCAAGTTCTAAGTTGGACCCTTGGGAG
ATTCCAGGTACAGTTGATATTGATTCATCAGAGTTTTCTACACAATCAATTTCGGCCGAG
CAAACCAGTTCAAAAGTTGAGAAGAAAATCAAATCGAGTGGATGTCGAGCTTCTCGTGCT
GAAGAATACTCTACACCGAGGACTCAAAATTTTGGTTTGCCCACCAATTCCCGCACTACG
TGCTCAATTGCTAGCGACAAATTCGAAAGTGATGATGATGATTTGAGTGACTGGGAGGAA
GAAAGCTGTGACGAAATGGAAGATCAAGATGGTGATGATATTATGGGAACAACATGTGAA
GATGAGTCGGAAGAAACTGAACTTATAGAATATAATGTTGCAGAGTTAACAGAACAAGGC
CAACGAATAGTTGTTGCTCGTGGAGGGGAGGGTGGCTTAGGCAATCTGTCTATGAGGAAA
GCATCAAAGATTACGCAGAAGGGAGCCAATTCTGATGATGAAGTATCTGATGATTATGAT
CATGCATCACCAAGTGTTGGCTTGCCTGGCTCAGAGGTGGTACTTGTGCTAGAACTAAAG
AGCATTGCTGATGTGGGTCTTATTGGGATGCCAAACGCCGGCAAAAGCACCCTTCTTGGG
GCGTTGTCGAAGGCTAAACCAGTTGTCGGTGATTATGCATTCACAACATTGAGGCCTAAC
TTAGGTAACGTAAATTACTACGATTTTTCTTTAACTGTAGCTGACATCCCAGGACTCATA
AGAGGAGCCCATGAGAATCGTGGTCTTGGGCATGCTTTCCTTCGGCACATAGAACGTACA
AAAGTTCTAGCCTATGTGGTGGACTTGGCTGCAGCACTGGGTGATAACAAGGGAATACCA
CCATGGGAACAGCTAAATGACTTGATTTTGGAACTCGAGTACTATTCTGAGGGTTTATCT
GATCGACCATCCTTAGTGGTGGCTAACAAAGTTGACGAAGACGGGGCTGAAGAGGTATAT
AAAGAACTCAAACGCCGTGTATCTGGTGTGCCCGTTTTCCCAGTTAGTGCAATCTTAGAG
GAAGGAGTACCAGAACTGAAAGATGGTTTGAGGATGCTTATCAGCGGTGAACAAACACAC
AGGCTACAATTAGATGGTATAGTTCTTCACCAAGATGCTGCTCATGTGAGTATCTAGTCT
TGTATCTTTTCCCTTGCAGTGAAATATTATTTTGACTCAGGCATAAAGTTGCGTAGTTTT
GTTTAGCACATTAATTT