Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g056590.3.1
CDS Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G02740.1)
Sequence

ATGGATCTGAGGAGAAAAGGGTATTTGATATTTTTGTTAATTTTGGTTTTGGCTGTGGCA
GTAAAGGGAGAAAATGTTGTTTTTAATGTGAAACATAAGTATGGTGGGCGTGGAGGTTCA
ATCTTGAAGGAACTCAGAGCTCATGATAGTCGCCGCCATGGAAGAATGCTTGCTGCCGTT
GACTTTGAATTGGGTGGCAATGGCCAACCTACTGATGCAGCGCTCTATTACACTAAACTT
ACAATCGGGACTCCTTCTAAGGACTATCATGTCCAGGTAGATACTGGAAGTGACATCTTA
TGGGTGAATTGTGCTGGCTGTATGAGATGTCCTTCAAAAAGCAGTCTTGGGATAGAATTG
AAGCTGTATGACTTAAAAGCCTCATCCACTGGGAAAAGTGTATCTTGCGACCAAGACTTC
TGCACTGATATGTTTAATGCTCCCTACTCAGATTGCAGGGTGGGAACACCCTGTGAATAT
CAGGTTACTTACGGAGATGGCAGCTCAACTTCAGGATACTTTGTAAGGGATTTCATTCAT
TTTGATCAAGTCTCTGGGGATCTTCAAACCACATCCATGAATGGGTCCATAGCATTTGGG
TGCTCATCTAGACAATCAGGAGAGCTAGGCTCATCTACTCAAGCGGTTGACGGAATTATT
GGTTTTGGACAAGCAAACTCATCGCTTATTTCACAGCTAGCTGCATCTGGGAAGGTGAAC
AAAGTTTTTTCACATTGCCTAGACAGCAGTGATGGTGGCGGCATATTTGCCATTGGACAA
GTAGTTCAGCCAAAAGTAAAGTCAACACCACTAGTCCCAAATGAGCCACATTATAATGTT
GTCATGAAGGGAATTGAAGTTAATGGAGAAGCTCTAAACATCCCAACCACTATATTTGAT
GCGGGATCCAACAGAGGAACAATTATTGACAGTGGTACAACGTTAGCATATCTTCCTAAC
AAAGTCTATGATGCTCTCATGAGCAAGTTGATGGTTCGGCAACCAGATCTGACGACTCAT
CTTGTCGAGGGGACCTTCCACTGCTTTTTCTATAGTAAAAAGATTGATGATGGTTTCCCA
GTTGTAACCTTTCAGTTTGCTAATTCTCTGTATTTGAAAGTTTATCCCCACGATTATCTT
TTCGCAGTTAGTGAAAACGAGTGGTGTATCGGTTGGCAGGACAGTGGAATGCAGACAAAG
GATGGAAAGGAAATAACTCTCTTAGGAGATCTTGTGTTATCCAACAAGCTTGTGCTTTAT
GATCTTGAAAACCAGAGTATTGGCTGGACCGACTATAACTGCTCTTCGAGCATCAAAGTC
AGAGATGGAACTTCTGGGAAGGTGTATACTGTAGGTGCTCACAATATTTCATCAGCTTCT
ACGTTGAATTCAAGAATGGTTTTTACGTTCTTTATATTAGCAATCTCCCTCCTATGCAAT
TTGTTGAAGTGA

Peptide Sequence

PEP ID

Solyc04g056590.3.1
PEP Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G02740.1)
Sequence

MDLRRKGYLIFLLILVLAVAVKGENVVFNVKHKYGGRGGSILKELRAHDSRRHGRMLAAV
DFELGGNGQPTDAALYYTKLTIGTPSKDYHVQVDTGSDILWVNCAGCMRCPSKSSLGIEL
KLYDLKASSTGKSVSCDQDFCTDMFNAPYSDCRVGTPCEYQVTYGDGSSTSGYFVRDFIH
FDQVSGDLQTTSMNGSIAFGCSSRQSGELGSSTQAVDGIIGFGQANSSLISQLAASGKVN
KVFSHCLDSSDGGGIFAIGQVVQPKVKSTPLVPNEPHYNVVMKGIEVNGEALNIPTTIFD
AGSNRGTIIDSGTTLAYLPNKVYDALMSKLMVRQPDLTTHLVEGTFHCFFYSKKIDDGFP
VVTFQFANSLYLKVYPHDYLFAVSENEWCIGWQDSGMQTKDGKEITLLGDLVLSNKLVLY
DLENQSIGWTDYNCSSSIKVRDGTSGKVYTVGAHNISSASTLNSRMVFTFFILAISLLCN
LLK*

Transcript Sequence

Transcript ID

Solyc04g056590.3.1
Transcript Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G02740.1)
Sequence

ATACTATAGCTAACTTTTTTGTTTTAATAGAAAGTAAAAAGAAGAAGGGTGAGAGTATGA
AAATGTGTATGAAGAAAGTAATGTGCAGACAAGTATGACGACAAACGTCAGCTACACCAT
TGCATCATCACAAAGCTTTCTCCTTTTTCAGAACACTACCCCTTTCCTCAAAGATAACTA
TATACTATTTTATTCATTCTTTCGAAAATTGTAAAGAATTATTACACTTTGAAGAGGTCC
TGAGTCTTGACGCCAATCTCCATTTACTATATTTGTTCTGTATCTTGTTTTCTTCCTTTT
GGGTTTTTTCAAAACCGACTCTTTTTCTCAATCCAAATCAAGAAAAATATAATATTTCAT
CATTGTTGTGTATAAAGGGAAAAAAAGTTCTTTTCTTGCTTCATTCATTCATACATCCCA
TTTTTCTCTTGTGGGTGTTTATAAAGATTGGATTTTGGGAAGTGGGTGTTTTGTATTTGT
ATGTTGTGATAATGGATCTGAGGAGAAAAGGGTATTTGATATTTTTGTTAATTTTGGTTT
TGGCTGTGGCAGTAAAGGGAGAAAATGTTGTTTTTAATGTGAAACATAAGTATGGTGGGC
GTGGAGGTTCAATCTTGAAGGAACTCAGAGCTCATGATAGTCGCCGCCATGGAAGAATGC
TTGCTGCCGTTGACTTTGAATTGGGTGGCAATGGCCAACCTACTGATGCAGCGCTCTATT
ACACTAAACTTACAATCGGGACTCCTTCTAAGGACTATCATGTCCAGGTAGATACTGGAA
GTGACATCTTATGGGTGAATTGTGCTGGCTGTATGAGATGTCCTTCAAAAAGCAGTCTTG
GGATAGAATTGAAGCTGTATGACTTAAAAGCCTCATCCACTGGGAAAAGTGTATCTTGCG
ACCAAGACTTCTGCACTGATATGTTTAATGCTCCCTACTCAGATTGCAGGGTGGGAACAC
CCTGTGAATATCAGGTTACTTACGGAGATGGCAGCTCAACTTCAGGATACTTTGTAAGGG
ATTTCATTCATTTTGATCAAGTCTCTGGGGATCTTCAAACCACATCCATGAATGGGTCCA
TAGCATTTGGGTGCTCATCTAGACAATCAGGAGAGCTAGGCTCATCTACTCAAGCGGTTG
ACGGAATTATTGGTTTTGGACAAGCAAACTCATCGCTTATTTCACAGCTAGCTGCATCTG
GGAAGGTGAACAAAGTTTTTTCACATTGCCTAGACAGCAGTGATGGTGGCGGCATATTTG
CCATTGGACAAGTAGTTCAGCCAAAAGTAAAGTCAACACCACTAGTCCCAAATGAGCCAC
ATTATAATGTTGTCATGAAGGGAATTGAAGTTAATGGAGAAGCTCTAAACATCCCAACCA
CTATATTTGATGCGGGATCCAACAGAGGAACAATTATTGACAGTGGTACAACGTTAGCAT
ATCTTCCTAACAAAGTCTATGATGCTCTCATGAGCAAGTTGATGGTTCGGCAACCAGATC
TGACGACTCATCTTGTCGAGGGGACCTTCCACTGCTTTTTCTATAGTAAAAAGATTGATG
ATGGTTTCCCAGTTGTAACCTTTCAGTTTGCTAATTCTCTGTATTTGAAAGTTTATCCCC
ACGATTATCTTTTCGCAGTTAGTGAAAACGAGTGGTGTATCGGTTGGCAGGACAGTGGAA
TGCAGACAAAGGATGGAAAGGAAATAACTCTCTTAGGAGATCTTGTGTTATCCAACAAGC
TTGTGCTTTATGATCTTGAAAACCAGAGTATTGGCTGGACCGACTATAACTGCTCTTCGA
GCATCAAAGTCAGAGATGGAACTTCTGGGAAGGTGTATACTGTAGGTGCTCACAATATTT
CATCAGCTTCTACGTTGAATTCAAGAATGGTTTTTACGTTCTTTATATTAGCAATCTCCC
TCCTATGCAATTTGTTGAAGTGAGATACCAGACAAAAAACTGTATAGGGAGTCATTGTTG
TACCATATCATTCCGCAGTTCGATGATTCTTTGGAATAACAAGTCTTATACCTCATCAAC
ATGATTCTTGACAATTACACAAAATACAAACAACACTGGTTTTGATGAAACATACAGTTT
CTCTTCTGTTCTAACACACTGGAACCGACCTCTCGTAGATGCTGTTGGTCTAAGTATTCC
TTTCTTATTCTGTTTCATTTCCTGCCTGTTCTCTTGGGCCATGTGATAGAAGATGCTAAT
AGTGAAGAGATGCAAGCAAATGCTTGATAGGATAGTTTTTTTTTTTTTTTTGATGTTATT
TATGAGTATTTTCAATATTAATGTAAATCAATTGCTGTTTTTTGTTTTGTTTTTATGAGG
GATGTCATGTTAATGTATTTCTTAATTTATGAGTGCTAGATAAGAAGTGTTGTTTCAGCC
TCAGGCTGCATTTGCAAGCAGAGTGAAGATTGTGTACGAGTGTTATGTTATATAATCCCT
CTTTCATTTTGTTGACTTTTTTCATAAAATATATAACAATATACTTTCAGGAACTAATAT
TAGATTGAATATATTCCAACATAATACTGATTACTAAAGATTATGATGACGCATTGGAGG
GGAAAGGAATCC