Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g056540.3.1
CDS Infomation

Riboflavin biosynthesis RibD (AHRD V3.3 *** A0A0B0NJC0_GOSAR)
Sequence

ATGGCGCATTTGCTAGGAGGATTAGCTACACCTTTTCTCTGCAAACCCATTTCTGCTTCT
TCTTCTTCCAATTACAGTTACACATCCGCTTCATCTTTTGATTCTCTCTACATCAAACGA
GCAGCCGAATTAGCTGACAAATCGGCCGGATTTACCGCTCCTCATCCCAACTTCGGCTGC
GTTATCGCTGTTCCAAATGGTAGAGCTACGGTGGTCGGAGAAGGTTACTTGTACGCCGAA
GGGACTATTCCGGCGGAAGTGCAGGCTGTAGAAGCCGCTGGCGAGCAGTGTAGAGGTGCC
ACTGCTTATCTTAATATGGAACCTGGAGACTGTCACTGTGATACTAGTGCCGTTTCCGCC
CTAATCAAGGCAGGGATTAGTAGAGTTGTTGTTGGGATACGGCATCCGCTGCAACACCTT
CGTGGCAATGCCATTCACGCATTGAGGAGTGAAGGTCTTCAAGTTGATGTGCTTGGGGAA
GATACACAGAGTAAGACTATTGAGGATGCTATCAAATCCTGCCTTCTTGTCAATGCTCCT
TTACTATATAGAGCTGCCTGTCAAGTCCCATTCTCTGTTCTCAAGTATGCAATGACACTT
GATGGGAAAATTGCTGCTAGTTCTGGTCATGCTTCATGGATCAGTAGCAAAAAGTCAAGA
ACTCGAGTTTTTGAAATGCGGGGTAGAAGTGATGCTGTTATTGTTGGAGGAAATACTGTG
CGCAAAGACAATCCACGTTTGACGGTTAGACATGGAGGTGACCATCTGCCCCGGCGTGTT
GTATTATCTCAAACTCTTGACCTTCCAGAAGAAGCACATCTTTGGAATGTTTCTGAGGTC
CCCACTATAGTTGCTACACAAAGAGGTGCAAAGAGAAGTTTCCAGAGATTGCTTGCATCC
AAAGGCGTTGAAGTGGTGGAATTTGATATTTTAGATCCTAGAGATGTTATGGGGTACTTA
TATGATCGTGGTTATCTCTCTGTTTTGTGGGAGTGTGGAGGGACACTTGCTGCATCTGCT
ATTTCTTCTGGGGTCATACACAAAGTACATGCATTTGTCGCTCCCAAAATTATAGGTGGG
AAAAATGCACCGTCTCCAGTTGGGGAACTTGGAATGGTAGAGATGACCCAGGCTCTGGAA
CTAATTGATGTTTGCTATGAGCAGATTGGACCCGACATACTTGTTAGTGGGTTTCTGCAA
CCAGTTCCTGACTTGACACCTACTATTCCATCAGTACAAGAAACTTCAGCCATTGATCCT
ACCATTTCTCCTTATGAATCAAGCATCATTTTCTTTTACAAGACATGGGATCCATATGGT
GCCTTCTCAAATTTTTCACTCCATCCAATTCAGATGCCTGATGAAAATGAAGAACTTGTC
ACCTGGTCCAGTGTAGAGCATTATTACCAGGCACAAAAGTTTGTTGGGGTATCTGATCCT
GTAGCTAAAAGCTGTATTGAAGAATTAAAATGTGCAAAGAGCCCCGAGGAAGCAGCACGG
ATTGGAAGGAGAATACAGAGGCAGCAACCTAATCTGGTAAGACCAGACTGGGAATCTATC
AAGATTGACGTCATGTACAAGGCCTTACATTGCAAGTTCACTACATACCCCTATTTAAAC
TCTTTGTTGCTCTCAACGGCGGGATCTGTTCTTGTGGAGGGTTCACCACATGATCTATTC
TGGGGAGGAGGTCGAGACGGAGAAGGCCTTAACTATCTTGGACGATTGCTAATGAAGTTG
AGATCTGAGCTCTTAGGTGAGTCTTCAACCAGTCAAAAATCTTTGCTTCCTCAAACTTCA
GAAAATAATTAG

Peptide Sequence

PEP ID

Solyc04g056540.3.1
PEP Infomation

Riboflavin biosynthesis RibD (AHRD V3.3 *** A0A0B0NJC0_GOSAR)
Sequence

MAHLLGGLATPFLCKPISASSSSNYSYTSASSFDSLYIKRAAELADKSAGFTAPHPNFGC
VIAVPNGRATVVGEGYLYAEGTIPAEVQAVEAAGEQCRGATAYLNMEPGDCHCDTSAVSA
LIKAGISRVVVGIRHPLQHLRGNAIHALRSEGLQVDVLGEDTQSKTIEDAIKSCLLVNAP
LLYRAACQVPFSVLKYAMTLDGKIAASSGHASWISSKKSRTRVFEMRGRSDAVIVGGNTV
RKDNPRLTVRHGGDHLPRRVVLSQTLDLPEEAHLWNVSEVPTIVATQRGAKRSFQRLLAS
KGVEVVEFDILDPRDVMGYLYDRGYLSVLWECGGTLAASAISSGVIHKVHAFVAPKIIGG
KNAPSPVGELGMVEMTQALELIDVCYEQIGPDILVSGFLQPVPDLTPTIPSVQETSAIDP
TISPYESSIIFFYKTWDPYGAFSNFSLHPIQMPDENEELVTWSSVEHYYQAQKFVGVSDP
VAKSCIEELKCAKSPEEAARIGRRIQRQQPNLVRPDWESIKIDVMYKALHCKFTTYPYLN
SLLLSTAGSVLVEGSPHDLFWGGGRDGEGLNYLGRLLMKLRSELLGESSTSQKSLLPQTS
ENN*

Transcript Sequence

Transcript ID

Solyc04g056540.3.1
Transcript Infomation

Riboflavin biosynthesis RibD (AHRD V3.3 *** A0A0B0NJC0_GOSAR)
Sequence

GTTTATGTTCCCTAACGTGTATCAAATTGGGATTAACCATAGCTCCCTGCTTATCTCCCT
CCTTCATCAACTGCTATAACATCATTATCCCATTGAAGTAAAGTGTGTTATTCAAAAAAA
AAAAAAAAATTAAACTTTGCAAAAATTCTTTACTTTACTTATTTTTTTGATAGATCATTT
AAATTATAAATATGCGATATTATATAGCGATGAAAAAATACTATATACGATATGAAATAA
TGTAACAATTGTCCAAATAAAAGCTTGAATAGATGCATTTACAAGGTGATTGAGTAATGT
AATTTTCATGGCTAATTAATTGACAGAGTTGGGTTACATAATTAATTACGTGAAGCTATT
AAACATTCATTTTATCTTCAAAGTTTGCCCACAAAATCCATGGCGCATTTGCTAGGAGGA
TTAGCTACACCTTTTCTCTGCAAACCCATTTCTGCTTCTTCTTCTTCCAATTACAGTTAC
ACATCCGCTTCATCTTTTGATTCTCTCTACATCAAACGAGCAGCCGAATTAGCTGACAAA
TCGGCCGGATTTACCGCTCCTCATCCCAACTTCGGCTGCGTTATCGCTGTTCCAAATGGT
AGAGCTACGGTGGTCGGAGAAGGTTACTTGTACGCCGAAGGGACTATTCCGGCGGAAGTG
CAGGCTGTAGAAGCCGCTGGCGAGCAGTGTAGAGGTGCCACTGCTTATCTTAATATGGAA
CCTGGAGACTGTCACTGTGATACTAGTGCCGTTTCCGCCCTAATCAAGGCAGGGATTAGT
AGAGTTGTTGTTGGGATACGGCATCCGCTGCAACACCTTCGTGGCAATGCCATTCACGCA
TTGAGGAGTGAAGGTCTTCAAGTTGATGTGCTTGGGGAAGATACACAGAGTAAGACTATT
GAGGATGCTATCAAATCCTGCCTTCTTGTCAATGCTCCTTTACTATATAGAGCTGCCTGT
CAAGTCCCATTCTCTGTTCTCAAGTATGCAATGACACTTGATGGGAAAATTGCTGCTAGT
TCTGGTCATGCTTCATGGATCAGTAGCAAAAAGTCAAGAACTCGAGTTTTTGAAATGCGG
GGTAGAAGTGATGCTGTTATTGTTGGAGGAAATACTGTGCGCAAAGACAATCCACGTTTG
ACGGTTAGACATGGAGGTGACCATCTGCCCCGGCGTGTTGTATTATCTCAAACTCTTGAC
CTTCCAGAAGAAGCACATCTTTGGAATGTTTCTGAGGTCCCCACTATAGTTGCTACACAA
AGAGGTGCAAAGAGAAGTTTCCAGAGATTGCTTGCATCCAAAGGCGTTGAAGTGGTGGAA
TTTGATATTTTAGATCCTAGAGATGTTATGGGGTACTTATATGATCGTGGTTATCTCTCT
GTTTTGTGGGAGTGTGGAGGGACACTTGCTGCATCTGCTATTTCTTCTGGGGTCATACAC
AAAGTACATGCATTTGTCGCTCCCAAAATTATAGGTGGGAAAAATGCACCGTCTCCAGTT
GGGGAACTTGGAATGGTAGAGATGACCCAGGCTCTGGAACTAATTGATGTTTGCTATGAG
CAGATTGGACCCGACATACTTGTTAGTGGGTTTCTGCAACCAGTTCCTGACTTGACACCT
ACTATTCCATCAGTACAAGAAACTTCAGCCATTGATCCTACCATTTCTCCTTATGAATCA
AGCATCATTTTCTTTTACAAGACATGGGATCCATATGGTGCCTTCTCAAATTTTTCACTC
CATCCAATTCAGATGCCTGATGAAAATGAAGAACTTGTCACCTGGTCCAGTGTAGAGCAT
TATTACCAGGCACAAAAGTTTGTTGGGGTATCTGATCCTGTAGCTAAAAGCTGTATTGAA
GAATTAAAATGTGCAAAGAGCCCCGAGGAAGCAGCACGGATTGGAAGGAGAATACAGAGG
CAGCAACCTAATCTGGTAAGACCAGACTGGGAATCTATCAAGATTGACGTCATGTACAAG
GCCTTACATTGCAAGTTCACTACATACCCCTATTTAAACTCTTTGTTGCTCTCAACGGCG
GGATCTGTTCTTGTGGAGGGTTCACCACATGATCTATTCTGGGGAGGAGGTCGAGACGGA
GAAGGCCTTAACTATCTTGGACGATTGCTAATGAAGTTGAGATCTGAGCTCTTAGGTGAG
TCTTCAACCAGTCAAAAATCTTTGCTTCCTCAAACTTCAGAAAATAATTAGTAGTGATGT
TTCTCATTTCTGTCCTATCAATGTTAGGCTAATGTTGTAATCTACCAATAAAACCAAGCC
TCTCGATACGTGTTGCACGTGTATTTCGAGTTTCATAATTCATATTTATCTAAACATCGT
TGCTGAGGCTAGACGAGTCAGTTGAGTTATAGTTTCATTTTCTTTTATTTACAAGCATCT
CTTACTTTAGACACTATATATAAAGTATTGGAGTTATTTTCTGCAATGGTTGTAATTGTT
ACAGCGTAAAATATAGCAAT