Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g056380.3.1
CDS Infomation

Seipin (AHRD V3.3 *** A0A0B0N0V2_GOSAR)
Sequence

ATGATTTCCATGGAAGAAAAAAATGAGCAAGAGGAAGAATACAATGAAGATGAACTACTA
AAGAACAACAATTCATCAGTTCAAAACTCATCATCATCAAATTGGTTCATAAAAATGCTA
TCTTCACAAGCAGAAATCATCACAACTGTTTTCATTTCACTAGTTTCCCCAATTTTCTAC
ATCCTCTCTTTTGCTAATATCTTTGAAGAAGAAGAAGAAAGTGAAAAGAAAGTCTCTGTA
GCTGTACATGTTGTAGCTACAGTTTCTTCGAAGTTACTTCATGGAGTTGCTCTGCTGCTA
AAGAAATTTGGGGCTGGAATTCTTGGAGCTGCTTACGTTGCTATAGTTTTGATAAGTTTG
TTGATGGTTTCGGGGATTTTGGGATTTGGGTTCGTGAGGATGTGGATGGAAGAACCTGTG
ATTTTGAGAGAACCGTTGTATTTTGATTATGCAGATGGGAATCCAAAGGCTGTTTTTTCT
TTTGGTGGAGGTTATGATAATGATGCTGGTGTGCCTCTTGGGCATACAATGTATGTTTCT
TTGTTTCTACTAATGCCTGAATCTGATTTCAATAGAGACATTGGTGTTTTCCAGTTGGTT
GCAGAATCATTATCAAAAGAGGGGTTGGTAATGGCGACATCAAGTCATCCATGTATGTTA
CGATTCAGGAGTTTGCCGATCCGTCTGATGCGCGAATTTATAATGAGTGTGCCCCTAGTA
CTTGGACTTACTGCTGAAACGCAAACGATTGTTGTTACGATGTTAAAGCATAAGGAAGGT
CTTCCAAGGACAGAAGCAATCAGAATAACTATGATACCTCGAGCCGGAACGTTCGGTCTG
CCCCAACTTTATCAATCACAGATCATATTGAAATCTCAGCCTCCTTGGTATAAAAACTTG
GTTTACAAGTGGAAATGGACAATATCTGTCTGGGCTTCAATGTACATGTATGCCACTCTG
CTAGTTATTCTCCTCAGCTGGTGCAGACCGCTCGTCTTTCCAGTGATTGCGACAAGCTTT
ATGACTAGTGCTGATGTGAATTCAACAGCAGAAGCACCGGAAGAACCACAGGAGGAAGGT
CGAGAAGAAAGTGATGTGTCCGAGTCAGTTAGAAGATGGCGCCAGAGCAGAAGAAAGAGG
AAGGCCATGCTTCAACAGAGCGTGTCACCGGAGTTTGCAGATGATTCTGCATCAAGCATT
TCCATAACTAGGGAAGACACAGCTGATTCAAGCGAGTGA

Peptide Sequence

PEP ID

Solyc04g056380.3.1
PEP Infomation

Seipin (AHRD V3.3 *** A0A0B0N0V2_GOSAR)
Sequence

MISMEEKNEQEEEYNEDELLKNNNSSVQNSSSSNWFIKMLSSQAEIITTVFISLVSPIFY
ILSFANIFEEEEESEKKVSVAVHVVATVSSKLLHGVALLLKKFGAGILGAAYVAIVLISL
LMVSGILGFGFVRMWMEEPVILREPLYFDYADGNPKAVFSFGGGYDNDAGVPLGHTMYVS
LFLLMPESDFNRDIGVFQLVAESLSKEGLVMATSSHPCMLRFRSLPIRLMREFIMSVPLV
LGLTAETQTIVVTMLKHKEGLPRTEAIRITMIPRAGTFGLPQLYQSQIILKSQPPWYKNL
VYKWKWTISVWASMYMYATLLVILLSWCRPLVFPVIATSFMTSADVNSTAEAPEEPQEEG
REESDVSESVRRWRQSRRKRKAMLQQSVSPEFADDSASSISITREDTADSSE*

Transcript Sequence

Transcript ID

Solyc04g056380.3.1
Transcript Infomation

Seipin (AHRD V3.3 *** A0A0B0N0V2_GOSAR)
Sequence

TATTTTAAGACAATAAAACATGCTGGTTTTTTTCTAAAAAAACGTGTCAACTGTTGAGCT
AAGCTGGGTGCCACTTCTCTCACCTTCTTCCTCGTGCACTTCACATCTGGACTCTGTTGG
AAGAAAAAAAAACTGAAGAAAACCCCAAGTGACAAGTAACGTGAACTTCCATTTTCCATC
TAACAAGTGATGATTTCCATGGAAGAAAAAAATGAGCAAGAGGAAGAATACAATGAAGAT
GAACTACTAAAGAACAACAATTCATCAGTTCAAAACTCATCATCATCAAATTGGTTCATA
AAAATGCTATCTTCACAAGCAGAAATCATCACAACTGTTTTCATTTCACTAGTTTCCCCA
ATTTTCTACATCCTCTCTTTTGCTAATATCTTTGAAGAAGAAGAAGAAAGTGAAAAGAAA
GTCTCTGTAGCTGTACATGTTGTAGCTACAGTTTCTTCGAAGTTACTTCATGGAGTTGCT
CTGCTGCTAAAGAAATTTGGGGCTGGAATTCTTGGAGCTGCTTACGTTGCTATAGTTTTG
ATAAGTTTGTTGATGGTTTCGGGGATTTTGGGATTTGGGTTCGTGAGGATGTGGATGGAA
GAACCTGTGATTTTGAGAGAACCGTTGTATTTTGATTATGCAGATGGGAATCCAAAGGCT
GTTTTTTCTTTTGGTGGAGGTTATGATAATGATGCTGGTGTGCCTCTTGGGCATACAATG
TATGTTTCTTTGTTTCTACTAATGCCTGAATCTGATTTCAATAGAGACATTGGTGTTTTC
CAGTTGGTTGCAGAATCATTATCAAAAGAGGGGTTGGTAATGGCGACATCAAGTCATCCA
TGTATGTTACGATTCAGGAGTTTGCCGATCCGTCTGATGCGCGAATTTATAATGAGTGTG
CCCCTAGTACTTGGACTTACTGCTGAAACGCAAACGATTGTTGTTACGATGTTAAAGCAT
AAGGAAGGTCTTCCAAGGACAGAAGCAATCAGAATAACTATGATACCTCGAGCCGGAACG
TTCGGTCTGCCCCAACTTTATCAATCACAGATCATATTGAAATCTCAGCCTCCTTGGTAT
AAAAACTTGGTTTACAAGTGGAAATGGACAATATCTGTCTGGGCTTCAATGTACATGTAT
GCCACTCTGCTAGTTATTCTCCTCAGCTGGTGCAGACCGCTCGTCTTTCCAGTGATTGCG
ACAAGCTTTATGACTAGTGCTGATGTGAATTCAACAGCAGAAGCACCGGAAGAACCACAG
GAGGAAGGTCGAGAAGAAAGTGATGTGTCCGAGTCAGTTAGAAGATGGCGCCAGAGCAGA
AGAAAGAGGAAGGCCATGCTTCAACAGAGCGTGTCACCGGAGTTTGCAGATGATTCTGCA
TCAAGCATTTCCATAACTAGGGAAGACACAGCTGATTCAAGCGAGTGA