Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g056320.2.1
CDS Infomation	Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (AHRD V3.3 *** W9QND6_9ROSA)
Sequence	ATGGGAGTATTAAAACCCCACTTACATTTCCACCGTAAAACTGAAACCCCTATCATTATC TTCCATTTTATGTCATTTACCGGCGACTTACGTCATTTGCCGCCCAACACAATCGGAGAT GATCCTATGGTTCCACTGCTCAACCTCTCCGCCGTTCAAACACGAATGGATTCCCTCCAG AAATTTCTCTCAGATTCGGTCAACTCCAATACTTTACTTGGTCAACACCAGATGAACATG GTTTCCGACGAAATCACCTCCGCAATCCATCAGATTATTGTCAACGGCGCCGCTCTACTC TCATCTGCCCAGTTGACAAATCCTCCTCCGCCTCCGCCTCCGCCTCCGCGGCCGTCGTCG TCGGCTGAATTGAAAATAAATCTAAAATCGAATCATAAGAGATCGTTTCCGGAATTTGAT CGGAGAGATTTCGAGTCGAAAGTAGAGGTATTAGACGAAGAAGAGGAAGACGGTGGCGAT TGGGAGATTATTGAGCTAGATGCGGTTGAGCTACTAGCGGAGCACATCCACTTTTGTGAT TTCTGCGGAAAAGGATTCAAACGAGATGCGAATTTACGGATGCATATGAGAGCTCATGGA AATCAGTACAAAACACCAGAAGCATTAGCAAAACCTGAAAAATGCATCGATTCATCGAAT TCGAATAAACGAAGGAGATTTTCGTGTCCTTTCATCGGTTGTACCCGCAACAAATCGCAT AACAAATTTCGGCCATTGAAATCGGCGATTTGCGTTAAGAATCACTTCAAGAGAAGTCAC TGTCCCAAAATGTACTCATGCACTCGTTGTAACAAAAAAAGTTTCTCCGTACTCGCAGAT TTGAAAAGCCATTTGAAGCACTGTGGAGAGACGAAATGGAAGTGTTCTTGTGGTACGAGC TTTTCCCGGAAGGACAAATTGTTCGGTCACATGGCGTTGTTCGAAGGACATATGCCGGCG GTAGAAACGGCGCCGGCGATTGAAAATGAAAAGGATGTGGGAGTGGATATCAATGGTGGG TCGGGTAATGGGTTGATGGATATTAGAACCGGGTCGGATAATGGGTTTTTGGATAGGTTA ATGCTTGATGGGTTTGAATCTATTGATAGTTATTGCTTCCAAGATTTATTCGAATCTTCT TCACCAAATGGTTTAAATACGGTTCCAAACACTACTGGATGGTTTGTTTAG

Peptide Sequence

PEP ID	Solyc04g056320.2.1
PEP Infomation	Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (AHRD V3.3 *** W9QND6_9ROSA)
Sequence	MGVLKPHLHFHRKTETPIIIFHFMSFTGDLRHLPPNTIGDDPMVPLLNLSAVQTRMDSLQ KFLSDSVNSNTLLGQHQMNMVSDEITSAIHQIIVNGAALLSSAQLTNPPPPPPPPPRPSS SAELKINLKSNHKRSFPEFDRRDFESKVEVLDEEEEDGGDWEIIELDAVELLAEHIHFCD FCGKGFKRDANLRMHMRAHGNQYKTPEALAKPEKCIDSSNSNKRRRFSCPFIGCTRNKSH NKFRPLKSAICVKNHFKRSHCPKMYSCTRCNKKSFSVLADLKSHLKHCGETKWKCSCGTS FSRKDKLFGHMALFEGHMPAVETAPAIENEKDVGVDINGGSGNGLMDIRTGSDNGFLDRL MLDGFESIDSYCFQDLFESSSPNGLNTVPNTTGWFV*

Transcript Sequence

Transcript ID	Solyc04g056320.2.1
Transcript Infomation	Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (AHRD V3.3 *** W9QND6_9ROSA)
Sequence	ACAAAACTTTTATTATAAAATAAATAATTCTTTTTAAAAGAAATCGATAACATATTTTGA GTTTTACTATTTATTAATTGGAAGTAGTCAAATAATATGGGAGTATTAAAACCCCACTTA CATTTCCACCGTAAAACTGAAACCCCTATCATTATCTTCCATTTTATGTCATTTACCGGC GACTTACGTCATTTGCCGCCCAACACAATCGGAGATGATCCTATGGTTCCACTGCTCAAC CTCTCCGCCGTTCAAACACGAATGGATTCCCTCCAGAAATTTCTCTCAGATTCGGTCAAC TCCAATACTTTACTTGGTCAACACCAGATGAACATGGTTTCCGACGAAATCACCTCCGCA ATCCATCAGATTATTGTCAACGGCGCCGCTCTACTCTCATCTGCCCAGTTGACAAATCCT CCTCCGCCTCCGCCTCCGCCTCCGCGGCCGTCGTCGTCGGCTGAATTGAAAATAAATCTA AAATCGAATCATAAGAGATCGTTTCCGGAATTTGATCGGAGAGATTTCGAGTCGAAAGTA GAGGTATTAGACGAAGAAGAGGAAGACGGTGGCGATTGGGAGATTATTGAGCTAGATGCG GTTGAGCTACTAGCGGAGCACATCCACTTTTGTGATTTCTGCGGAAAAGGATTCAAACGA GATGCGAATTTACGGATGCATATGAGAGCTCATGGAAATCAGTACAAAACACCAGAAGCA TTAGCAAAACCTGAAAAATGCATCGATTCATCGAATTCGAATAAACGAAGGAGATTTTCG TGTCCTTTCATCGGTTGTACCCGCAACAAATCGCATAACAAATTTCGGCCATTGAAATCG GCGATTTGCGTTAAGAATCACTTCAAGAGAAGTCACTGTCCCAAAATGTACTCATGCACT CGTTGTAACAAAAAAAGTTTCTCCGTACTCGCAGATTTGAAAAGCCATTTGAAGCACTGT GGAGAGACGAAATGGAAGTGTTCTTGTGGTACGAGCTTTTCCCGGAAGGACAAATTGTTC GGTCACATGGCGTTGTTCGAAGGACATATGCCGGCGGTAGAAACGGCGCCGGCGATTGAA AATGAAAAGGATGTGGGAGTGGATATCAATGGTGGGTCGGGTAATGGGTTGATGGATATT AGAACCGGGTCGGATAATGGGTTTTTGGATAGGTTAATGCTTGATGGGTTTGAATCTATT GATAGTTATTGCTTCCAAGATTTATTCGAATCTTCTTCACCAAATGGTTTAAATACGGTT CCAAACACTACTGGATGGTTTGTTTAGGTTCTCGTTGATGGGGTTGCTTTTTTGCGAATC AGATTTGGAGGAGATCGCCATTGCTGCTGTAACTATTTTTTTTTCAAAAATGAATAGAGA GGGATGACTTCACAGAGATAAATTTACAAGGCAAAGCTGCTTTCACGTGGGGCGATTTGG GTCCATGATCTGCAACGATAATACTTTTTTGTATACTCTTATTTTAAATTTAAATTAAAT ATATATGTAAATGTGTCAAAAATATAAATAAATAGGCCTTTGTCCAGAGCATTAAAAAAA TAATTTTTTT