Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g055000.3.1
CDS Infomation	tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** AT5G65160.1)
Sequence	ATGGGTGATGAAAGGAAAACAGGTTGTGGCCTGTTGAACGCTGTTTTTGGAAGGAAAACT ATGTGGACAAAAAGATCGACATCAACAGGTTCGCTTCCAACTCCAAATTCCAGCAATGGT AACAATTTAACGCGATCATCTAGTACTCAAAATTCTAAAAAGCATCGGAATGGATCCAAC GAGGCTTTTTTAGACAACGAGAAACAAGCTGATAGGATCATACCAAGACCTAATCCAAAT CAATCCAAAGTAGCTGCGAATAAGGGTAATGTGCAAGGTGCTGCTGCTGCACCTGTTTAT AATCAGCAGAAAACTAATGGTCAAGGGTATAATAATCAAGGAAGAAAAGTAGTTCCGCCA TCAACCGGGATATCAGGGGAGCTTGAAAACATGATACAAGATCATCAAAGATCAAATGGT GCTAATACATTAGTTCGTGCATCGTCTAGCAATGTGATGTTGTTTGGTAATTTGGGTAAC ATAAGGCAGCAAGGTGGGGGCAATGCTACAACAACTTCAACAGCGAATCATGTTCTTGAT TATTTACCAAGAACGGCTAAAGAAGAACCACAACAACAACCATCTCAGAATGGGAAATAC CCGACGAGTGTTATGGGTAATGTAGTAAAGAAAAAGGGTGATCAAGAACAGGGGAAAACA GGGGGCTCTGTTTCCCTTTGTCGCGCTTTATCCACTAGAATGGACCCTGAGCAATTGAAG ATTCTTGGAAATGAAGATTACAAGAATGGAAGATTTGCTGAGGCTTTAGCTTTGTATGAT GCTGCAATTTCAATTGATCCAAATAAGGCTTCTTATCGAAGCAACAAATCCGCTGCTTTG ACTGCTTTAGGAAGGCTTCTAGAAGCTGTTTTTGAGTGCAGAGAAGCTATATCAATTGAT CCTCATTATCAAAGAGCTCATAATCGTTTGGCCACTCTATGTGTCAGATTAGGAGATACA GAGAAAGCTATGTACCATTACAAACTAGCTGCATCAGAAGCTGATCCTGATGTTGTGACA AAGTCTAAATCTATTCAAATGCATCTTAGCAAGTGTACTGAAGCGAAGAGGCAAAGAGAT TGGAACACTCTTCTTAAAGAATCTGCCCTCGCCATATCGGCTGGTGCAGATTCTGCACCA CAGATATTTGCTTTGAAAGCGGAGGCATTGGTGAAGCTCCATAGATACCATGAAGCAGAT CAAACTCTGAAGCATGGTCCGAATTTTGATATCGATGAATGTATAAAGTTCTTTGGCCCT ATTGGCAACGCAGGCTTGTTAGTCATTCAAGCTCAAGTTGACATGGCTGCTGGCAGGATT GACGATGCCCTAGCAGCGGCTCAACGAGCATCGCAACTAGATGGGAATAACAAGGAAGTG AACATGATAGTTAGGAGGACAAGGGGAGTAGCAAGTGCTAGAACAAAGGGAAATGAGTTG TTTAAAGGTGGAAAATATGGAGATGCTAGTGTTGCTTATGGTGAAGGACTAGAGCATGAT CCACACAACTCAGTTTTATTGTGCAACAGAGCAGCTTGCAGATCAAAACTTGGCCAATTT GAGAAAGCACTTGAGGATTGCAATACTGCCCTTAATGTTAGACCATCTTTCACCAAAGCT AGGTTGAGGAAGGCTGATTGTTACTTTAAGATGGGAAAATGGGAAGCATGCGTACAAGAA TGTGAAGTGTTGATAAAGGAGACACCAGAAAATGAGGATGTGGGACAAATGATTAAGGAT GCCCAACAACAACTCAAAAAATGA

Peptide Sequence

PEP ID	Solyc04g055000.3.1
PEP Infomation	tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** AT5G65160.1)
Sequence	MGDERKTGCGLLNAVFGRKTMWTKRSTSTGSLPTPNSSNGNNLTRSSSTQNSKKHRNGSN EAFLDNEKQADRIIPRPNPNQSKVAANKGNVQGAAAAPVYNQQKTNGQGYNNQGRKVVPP STGISGELENMIQDHQRSNGANTLVRASSSNVMLFGNLGNIRQQGGGNATTTSTANHVLD YLPRTAKEEPQQQPSQNGKYPTSVMGNVVKKKGDQEQGKTGGSVSLCRALSTRMDPEQLK ILGNEDYKNGRFAEALALYDAAISIDPNKASYRSNKSAALTALGRLLEAVFECREAISID PHYQRAHNRLATLCVRLGDTEKAMYHYKLAASEADPDVVTKSKSIQMHLSKCTEAKRQRD WNTLLKESALAISAGADSAPQIFALKAEALVKLHRYHEADQTLKHGPNFDIDECIKFFGP IGNAGLLVIQAQVDMAAGRIDDALAAAQRASQLDGNNKEVNMIVRRTRGVASARTKGNEL FKGGKYGDASVAYGEGLEHDPHNSVLLCNRAACRSKLGQFEKALEDCNTALNVRPSFTKA RLRKADCYFKMGKWEACVQECEVLIKETPENEDVGQMIKDAQQQLKK*

Transcript Sequence

Transcript ID	Solyc04g055000.3.1
Transcript Infomation	tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** AT5G65160.1)
Sequence	TAATAAAAAACATTATGAACAATATATATCAATATTATTTTTTTTCAATTTCAATTTTGT TTTTAAACGGCTCTAGGTAAGACAATGGGAAAAATAAAGCAAGAGTAGGTATGTGACCCT TTAGAATTAGAAAACAGCTGGCAGCCATACGTGAGCTGCTCAAAGTCTCCTACGTGAACT CCTCTCCTTAATTTGACTTGGTTCAAAAATTATAGGAAAATAAAATAATGAAATAAAAAA GATTCTGCCAACACTAAATTGTTTTATTTCCCTCTAAATATCTTGAGATCCTCCTTTGTT CCATGACCGAGTCTTTTGGTCTCCCTTTTTACACCACAAATACCAAACCAACAACAAAAA AAAGTTGAAAAAATTTAACCAAACAGAAAAGTAAAAGAAAAGGTGTTGAAAAAATTCCTT TTGCATACATTCATCATTACTACTAGTATTATTTACCCCCCCCCCCCCCCCCAAAACAGC TAATTTGTTTCTTCTCTTATCAATTTTTCACATTACATTTCTCTTCTTGATGTAATCATA TTTCATTTCCAACAGAAAGAAAGAGAAACAAACACTAAAAAAACTAAAAGAATAGAATAT GACAATTATGTACTCTTCTCCTTGGGGCAGTCACCATTTTTCACACAACCAATTTCATTA AATGTAACATCTTGTTTTTGGGTACTACATATTATGGGTTGTTGGTGAGTTATGTATTTC TTTTAAAGCTTGGTCTACAAGTCTTACATAAGAAGCTCATTTCATATCTCAACTATCTAT CCAATTATGGGTGATGAAAGGAAAACAGGTTGTGGCCTGTTGAACGCTGTTTTTGGAAGG AAAACTATGTGGACAAAAAGATCGACATCAACAGGTTCGCTTCCAACTCCAAATTCCAGC AATGGTAACAATTTAACGCGATCATCTAGTACTCAAAATTCTAAAAAGCATCGGAATGGA TCCAACGAGGCTTTTTTAGACAACGAGAAACAAGCTGATAGGATCATACCAAGACCTAAT CCAAATCAATCCAAAGTAGCTGCGAATAAGGGTAATGTGCAAGGTGCTGCTGCTGCACCT GTTTATAATCAGCAGAAAACTAATGGTCAAGGGTATAATAATCAAGGAAGAAAAGTAGTT CCGCCATCAACCGGGATATCAGGGGAGCTTGAAAACATGATACAAGATCATCAAAGATCA AATGGTGCTAATACATTAGTTCGTGCATCGTCTAGCAATGTGATGTTGTTTGGTAATTTG GGTAACATAAGGCAGCAAGGTGGGGGCAATGCTACAACAACTTCAACAGCGAATCATGTT CTTGATTATTTACCAAGAACGGCTAAAGAAGAACCACAACAACAACCATCTCAGAATGGG AAATACCCGACGAGTGTTATGGGTAATGTAGTAAAGAAAAAGGGTGATCAAGAACAGGGG AAAACAGGGGGCTCTGTTTCCCTTTGTCGCGCTTTATCCACTAGAATGGACCCTGAGCAA TTGAAGATTCTTGGAAATGAAGATTACAAGAATGGAAGATTTGCTGAGGCTTTAGCTTTG TATGATGCTGCAATTTCAATTGATCCAAATAAGGCTTCTTATCGAAGCAACAAATCCGCT GCTTTGACTGCTTTAGGAAGGCTTCTAGAAGCTGTTTTTGAGTGCAGAGAAGCTATATCA ATTGATCCTCATTATCAAAGAGCTCATAATCGTTTGGCCACTCTATGTGTCAGATTAGGA GATACAGAGAAAGCTATGTACCATTACAAACTAGCTGCATCAGAAGCTGATCCTGATGTT GTGACAAAGTCTAAATCTATTCAAATGCATCTTAGCAAGTGTACTGAAGCGAAGAGGCAA AGAGATTGGAACACTCTTCTTAAAGAATCTGCCCTCGCCATATCGGCTGGTGCAGATTCT GCACCACAGATATTTGCTTTGAAAGCGGAGGCATTGGTGAAGCTCCATAGATACCATGAA GCAGATCAAACTCTGAAGCATGGTCCGAATTTTGATATCGATGAATGTATAAAGTTCTTT GGCCCTATTGGCAACGCAGGCTTGTTAGTCATTCAAGCTCAAGTTGACATGGCTGCTGGC AGGATTGACGATGCCCTAGCAGCGGCTCAACGAGCATCGCAACTAGATGGGAATAACAAG GAAGTGAACATGATAGTTAGGAGGACAAGGGGAGTAGCAAGTGCTAGAACAAAGGGAAAT GAGTTGTTTAAAGGTGGAAAATATGGAGATGCTAGTGTTGCTTATGGTGAAGGACTAGAG CATGATCCACACAACTCAGTTTTATTGTGCAACAGAGCAGCTTGCAGATCAAAACTTGGC CAATTTGAGAAAGCACTTGAGGATTGCAATACTGCCCTTAATGTTAGACCATCTTTCACC AAAGCTAGGTTGAGGAAGGCTGATTGTTACTTTAAGATGGGAAAATGGGAAGCATGCGTA CAAGAATGTGAAGTGTTGATAAAGGAGACACCAGAAAATGAGGATGTGGGACAAATGATT AAGGATGCCCAACAACAACTCAAAAAATGAGGAATTTGTCAAAGACATGAAGAGCATGAA CACCACACAATGACATTTATGGTTGTCCATAACAAAGTAATTTGAATTGTATCATCACTT GTTTGTTCAATTCCAATCCCTCCATAAAAGGAAACAAAAGGGTCAAATATAGAAAAAAAA AAGTGGTAGGGAAGGGATTAAGTGAAGGATTTATAAAGGTCTTTTAGGGAACAAAGAAAA TAGATAATGGGAGAAAGATCAAAGGATTAAGAGGCTTGAGCTAGAAAATAGGATTTGGTA GGCTATATTGGCTCATATCTTTAGGGAAAAAAGAAAACAAAATTAAAGAAAGGAATTCAT TAGGGTGCTTTAGAAACAAAAAAAATTAAAGCACTATGAATTTTTAGTGAATGAGAACAA TTCTTTTACATTTGATGCATTTTCTTAATATGTAATCAGTTTGTTTAACATGGTTTTCCC GACTCATTCTCTACTTTGCCTTGTT