Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g054990.3.1
CDS Infomation

PLAT domain-containing protein 1 (AHRD V3.3 *** PLAT1_ARATH)
Sequence

ATGGGAGTATCAACTCAACTCAACTATTTTTGGTTCAATCTCTTTATACTCTTTTTTTGT
TTCTCCATCTCCTCTATTTATGGATCTGAAGTTGATTGTGTTTACACAGTTTACGTTCGA
ACGAGTTCAAAAATAAAAGCTGGAACTGATTCCATCATCAGCTTGACTCTCTACAATGCA
AACGGGTATGGTATTCGAATCAATAACTTGGAAGCTTGGGGCGGACTTATGGGCCCGGGT
TACAACTATTTCGAGAGAGGAAACTTGGACATTTTCAGTGGCCGAGGCCCATGTTTAAAT
GGGCCCATCTGTAAGATGAACTTGACTTCCGATGGAACAGGCTCCGGCCATGGATGGTAC
TGTAACTACGTTGAAGTCACCGTCACAGGAGTCCATAGAGAATGCCGTCAACAGCATTTC
GAAGTGGAGCAGTGGATCGCGACTGATCATTCTCCTTATCAGCTCACTTTCATCAAAAAT
CTGTGTAGAAAGACGAAGTCCGGGGAATATTTGTCCGTCTCTGCTGAGGATCTGCCTGCT
TCCGTTGAGAATTTGTCCTTCTCCGGTGAGGATCTGCCTGCTTCCGTTGAGAATTTACCT
GTTTCCGGTGAGAATCTGGTTGTTTTCGATGCTGCTGTGATGTGA

Peptide Sequence

PEP ID

Solyc04g054990.3.1
PEP Infomation

PLAT domain-containing protein 1 (AHRD V3.3 *** PLAT1_ARATH)
Sequence

MGVSTQLNYFWFNLFILFFCFSISSIYGSEVDCVYTVYVRTSSKIKAGTDSIISLTLYNA
NGYGIRINNLEAWGGLMGPGYNYFERGNLDIFSGRGPCLNGPICKMNLTSDGTGSGHGWY
CNYVEVTVTGVHRECRQQHFEVEQWIATDHSPYQLTFIKNLCRKTKSGEYLSVSAEDLPA
SVENLSFSGEDLPASVENLPVSGENLVVFDAAVM*

Transcript Sequence

Transcript ID

Solyc04g054990.3.1
Transcript Infomation

PLAT domain-containing protein 1 (AHRD V3.3 *** PLAT1_ARATH)
Sequence

ATGGGAGTATCAACTCAACTCAACTATTTTTGGTTCAATCTCTTTATACTCTTTTTTTGT
TTCTCCATCTCCTCTATTTATGGATCTGAAGTTGATTGTGTTTACACAGTTTACGTTCGA
ACGAGTTCAAAAATAAAAGCTGGAACTGATTCCATCATCAGCTTGACTCTCTACAATGCA
AACGGGTATGGTATTCGAATCAATAACTTGGAAGCTTGGGGCGGACTTATGGGCCCGGGT
TACAACTATTTCGAGAGAGGAAACTTGGACATTTTCAGTGGCCGAGGCCCATGTTTAAAT
GGGCCCATCTGTAAGATGAACTTGACTTCCGATGGAACAGGCTCCGGCCATGGATGGTAC
TGTAACTACGTTGAAGTCACCGTCACAGGAGTCCATAGAGAATGCCGTCAACAGCATTTC
GAAGTGGAGCAGTGGATCGCGACTGATCATTCTCCTTATCAGCTCACTTTCATCAAAAAT
CTGTGTAGAAAGACGAAGTCCGGGGAATATTTGTCCGTCTCTGCTGAGGATCTGCCTGCT
TCCGTTGAGAATTTGTCCTTCTCCGGTGAGGATCTGCCTGCTTCCGTTGAGAATTTACCT
GTTTCCGGTGAGAATCTGGTTGTTTTCGATGCTGCTGTGATGTGATCTATTAGTCATTTA
TTGGGCTTTGATTGGGCCTGAGCCCATATTTTATATTGGAGTAGTGTGAATTTATTAAGG
GGCAGAAAAGACAATTGGTAAGGGCTCAGGGTTGTTATGATGTTTATGTTTTCGAGATGT
AGTATGGTTGATGAAAACATTGATTATCTAATGAATAATAAGGTCCAATATATATTATCA
ATAGCTGAGCTAGAA