Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g054890.3.1
CDS Infomation

Acyl-coenzyme A oxidase (AHRD V3.3 *** K4BSN7_SOLLC)
Sequence

ATGGAGCTTCAAAAGATCAGCTCAAAGGGTCCTCAAAACAGTGAAGAAACGGCGGAACTC
GTGAACCGGCGAATCAATTTGCTGACGTTGCATTTGAACCCGGTTCAGGAATTGGAGCTG
CTGAGATGCGCAGGGAAGATGAAGGCGATTAAAGTGAGCACGGAGGCGCTGTCAGAGTAC
ATGAGAGGGAAGCATAGGGATATACAGGAAAAAGTATTTGCTTACTTTAATTCAAGACCG
GAACTTCAAACACCGATTGAGATATCGAAAGATGAACACAGGGAATTGTGCATGAAACAG
CTTGTGGGTTTGGTAAGGGAAGGTGGAATTAGGCCATTTAGGTATGTGGTTGACGATCCG
GCCAAGTATTTTGCGATTGCTGAAGCCGTGGGAAGCGTTGACATGTCACTTGGCATCAAA
ATGGGTGTTCAGTACAGTCTATGGGGAGGTTCTGTTATCAACTTGGGAACTAAAAAGCAC
AGAGACAAATACTTTGATGGTATAGACAATGTGGACTACCCGGGATGCTTTGCAATGACG
GAGCTTCATCATGGTTCCAATGTCCAAGGTCTTCAGACAGTTGCCACCTTTGATCCACTC
ACAGATGAATTCATAATTGACACGCCAAATGATGGGGCTATTAAATGGTGGATTGGTAAT
GCTGCCGTTCATGGGAAGTTTGCAACAGTTTTTGCAAGACTGATGTTACCAACTCATGAT
ACAAAAGGTGTTACTGACATGGGTGTTCATGCATTTATTGTTCCCATAAGGGATATGAAA
ACCCACAAAACAATGCCAGGGGTTGAAATACATGATTGTGGCCATAAAGTTGGCTTGAAT
GGAGTAGATAATGGTGCATTGAGATTTCGTTCAGTAAGAATTCCACGAGATAACCTTCTT
AATCGATTTGGAGACGTTTCACGGGATGGGAGATACACCAGCAGCCTGCCTACAATTAGC
AAAAGATTTGCTGCCACACTTGGAGAACTTGTTGGTGGTAGAGTTGGCCTTGCGTATTCA
TCTGTGGGTGTTCTCAAGATTGCTGTTGTTATTGCAACAAGATATTCTCTTTTGCGCCAG
CAATTCGGTCCTCCTAAACAACCTGAAGTTAGTATACTTGACTACCAATCTCAGCAGCAC
AAGCTTATGCCAATGTTGGCTTCGACCTACGCATTCCATTTTGCCACACTTCATCTGGTG
GAAAAATATTCTGAAATGAAGAAGTCTCATGATGAGGAACTGATAGGGGACGTACATGCA
CTTTCTGCAGGGCTAAAGGCCTATATCACTTCTTACACAGCAAAGTCATTGAGCACATGT
AGAGAAGCTTGTGGTGGCCATGGTTATGCCGCTGTCAATAGGTTTGGAATATTGAGGAAT
GATCATGACATATTTCAGACATTTGAGGGAGACAACACTGTTCTTCTGCAGCAGGTAGCC
GGCCTTCTGTTGAAGCAGTACAGGGAGAAATTCCGAGGTGGGACGCTCACTGTCACATGG
AACTACCTAAGACAATCCATGAATTCTTACCTTGCTCAGCCTAATCCAGTTACTGCTAGA
TGGGAAAGTGAAGAACACTTACGCAACCCTAACTTCCAGTTGGATGCTTTTAGGTATCGG
ACATCAAGGTTGCTTCAAAGTGTAGCTATCCGGCTTCAGAAGCACTCCAAGACTCTTGGA
GGATTTGGTGCTTGGAATAGATGTTTAAATCACCTGTTGACACTTGCAGAGTCTCATATC
GAATCGTTCATTCTTGAAAAGTTCATTGAAGCAGTTAAAAATTGTCCTGATGAAAACTCT
CGTGCTGCCCTAAAACTCGTGTGCGATCTCTATGCCTTGGACAGAATCTGGAATGATATA
GGAACTTACCGCAATGTGGACTATGTGGCCCCTAACAAAGCTAAGGCAATTCACAAGCTA
GCAGATTATCTATGCTTCCAAGTTAAGAATATCGCAAGGGAACTTGTTGATGCCTTTGAT
CTTCCAGATTATGTAACGCGTGCTCCAATTGGTGTGCAGACTCCATCAGAAGCTTATACT
CAGTATACACAGAATGTTGGGTTCTAA

Peptide Sequence

PEP ID

Solyc04g054890.3.1
PEP Infomation

Acyl-coenzyme A oxidase (AHRD V3.3 *** K4BSN7_SOLLC)
Sequence

MELQKISSKGPQNSEETAELVNRRINLLTLHLNPVQELELLRCAGKMKAIKVSTEALSEY
MRGKHRDIQEKVFAYFNSRPELQTPIEISKDEHRELCMKQLVGLVREGGIRPFRYVVDDP
AKYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNVDYPGCFAMT
ELHHGSNVQGLQTVATFDPLTDEFIIDTPNDGAIKWWIGNAAVHGKFATVFARLMLPTHD
TKGVTDMGVHAFIVPIRDMKTHKTMPGVEIHDCGHKVGLNGVDNGALRFRSVRIPRDNLL
NRFGDVSRDGRYTSSLPTISKRFAATLGELVGGRVGLAYSSVGVLKIAVVIATRYSLLRQ
QFGPPKQPEVSILDYQSQQHKLMPMLASTYAFHFATLHLVEKYSEMKKSHDEELIGDVHA
LSAGLKAYITSYTAKSLSTCREACGGHGYAAVNRFGILRNDHDIFQTFEGDNTVLLQQVA
GLLLKQYREKFRGGTLTVTWNYLRQSMNSYLAQPNPVTARWESEEHLRNPNFQLDAFRYR
TSRLLQSVAIRLQKHSKTLGGFGAWNRCLNHLLTLAESHIESFILEKFIEAVKNCPDENS
RAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLADYLCFQVKNIARELVDAFD
LPDYVTRAPIGVQTPSEAYTQYTQNVGF*

Transcript Sequence

Transcript ID

Solyc04g054890.3.1
Transcript Infomation

Acyl-coenzyme A oxidase (AHRD V3.3 *** K4BSN7_SOLLC)
Sequence

AACATTTCCATTTTCCAACCTCCATAACCATAAAACGTCTTCTTTCTCTCTCTACCTATA
TATACACAACTCTGTATCTATATATTTACTGATTTATCGTTTTTGTTTCAAGAATCCATG
GAGCTTCAAAAGATCAGCTCAAAGGGTCCTCAAAACAGTGAAGAAACGGCGGAACTCGTG
AACCGGCGAATCAATTTGCTGACGTTGCATTTGAACCCGGTTCAGGAATTGGAGCTGCTG
AGATGCGCAGGGAAGATGAAGGCGATTAAAGTGAGCACGGAGGCGCTGTCAGAGTACATG
AGAGGGAAGCATAGGGATATACAGGAAAAAGTATTTGCTTACTTTAATTCAAGACCGGAA
CTTCAAACACCGATTGAGATATCGAAAGATGAACACAGGGAATTGTGCATGAAACAGCTT
GTGGGTTTGGTAAGGGAAGGTGGAATTAGGCCATTTAGGTATGTGGTTGACGATCCGGCC
AAGTATTTTGCGATTGCTGAAGCCGTGGGAAGCGTTGACATGTCACTTGGCATCAAAATG
GGTGTTCAGTACAGTCTATGGGGAGGTTCTGTTATCAACTTGGGAACTAAAAAGCACAGA
GACAAATACTTTGATGGTATAGACAATGTGGACTACCCGGGATGCTTTGCAATGACGGAG
CTTCATCATGGTTCCAATGTCCAAGGTCTTCAGACAGTTGCCACCTTTGATCCACTCACA
GATGAATTCATAATTGACACGCCAAATGATGGGGCTATTAAATGGTGGATTGGTAATGCT
GCCGTTCATGGGAAGTTTGCAACAGTTTTTGCAAGACTGATGTTACCAACTCATGATACA
AAAGGTGTTACTGACATGGGTGTTCATGCATTTATTGTTCCCATAAGGGATATGAAAACC
CACAAAACAATGCCAGGGGTTGAAATACATGATTGTGGCCATAAAGTTGGCTTGAATGGA
GTAGATAATGGTGCATTGAGATTTCGTTCAGTAAGAATTCCACGAGATAACCTTCTTAAT
CGATTTGGAGACGTTTCACGGGATGGGAGATACACCAGCAGCCTGCCTACAATTAGCAAA
AGATTTGCTGCCACACTTGGAGAACTTGTTGGTGGTAGAGTTGGCCTTGCGTATTCATCT
GTGGGTGTTCTCAAGATTGCTGTTGTTATTGCAACAAGATATTCTCTTTTGCGCCAGCAA
TTCGGTCCTCCTAAACAACCTGAAGTTAGTATACTTGACTACCAATCTCAGCAGCACAAG
CTTATGCCAATGTTGGCTTCGACCTACGCATTCCATTTTGCCACACTTCATCTGGTGGAA
AAATATTCTGAAATGAAGAAGTCTCATGATGAGGAACTGATAGGGGACGTACATGCACTT
TCTGCAGGGCTAAAGGCCTATATCACTTCTTACACAGCAAAGTCATTGAGCACATGTAGA
GAAGCTTGTGGTGGCCATGGTTATGCCGCTGTCAATAGGTTTGGAATATTGAGGAATGAT
CATGACATATTTCAGACATTTGAGGGAGACAACACTGTTCTTCTGCAGCAGGTAGCCGGC
CTTCTGTTGAAGCAGTACAGGGAGAAATTCCGAGGTGGGACGCTCACTGTCACATGGAAC
TACCTAAGACAATCCATGAATTCTTACCTTGCTCAGCCTAATCCAGTTACTGCTAGATGG
GAAAGTGAAGAACACTTACGCAACCCTAACTTCCAGTTGGATGCTTTTAGGTATCGGACA
TCAAGGTTGCTTCAAAGTGTAGCTATCCGGCTTCAGAAGCACTCCAAGACTCTTGGAGGA
TTTGGTGCTTGGAATAGATGTTTAAATCACCTGTTGACACTTGCAGAGTCTCATATCGAA
TCGTTCATTCTTGAAAAGTTCATTGAAGCAGTTAAAAATTGTCCTGATGAAAACTCTCGT
GCTGCCCTAAAACTCGTGTGCGATCTCTATGCCTTGGACAGAATCTGGAATGATATAGGA
ACTTACCGCAATGTGGACTATGTGGCCCCTAACAAAGCTAAGGCAATTCACAAGCTAGCA
GATTATCTATGCTTCCAAGTTAAGAATATCGCAAGGGAACTTGTTGATGCCTTTGATCTT
CCAGATTATGTAACGCGTGCTCCAATTGGTGTGCAGACTCCATCAGAAGCTTATACTCAG
TATACACAGAATGTTGGGTTCTAATTTATAACAGAAGTGGGCAATATATGTTTCCTCTGA
TTTTCATAGTTCAAAAAGTTCCCCATGGTCCTTATAAGTATACTTTGTATACCATTATTT
ATCCTGATGTCAAGCTTCCTGCATCTCTTTTATCTTTGGTAAGGCAAGCTTGAGGAATTC
TTCTTGTATTCACTTCTTGTCAACTAGTTCTAATTGGTGTATTTGTCTTAATATTATATA
TGAAATCAGATCCGAAGGGGTTCATATTACATCATGCATTTGCATTATTTATGGTGGTTT
CTAAATATAGTTATTT