Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g054720.3.1
CDS Infomation

APOLLO (AHRD V3.3 *-* U5U5S3_9BRAS)
Sequence

ATGGTAGTTTGTTCAAGAAAGCTCGTTGAACTTGAGAGCTACTGCACCCTTATTAGGCCA
GGGGATTTGTCAGTTGTTGGATTAAAGTCAGGGAGAGTCGGTGGTATTACGCGAAAAGCA
GTTGCTGATGCACCTTCATTTGAACATGTTGCACAAAAGATCTTCAACATTTTGGATGGT
AGGATTTGGGCAGGTCATAACATACAGAGATTTGATTGTGTTCGTATTAAAGCTGCTTTC
GCTGAAATTGGTTACCCTGCACCTGTGCCTGTTGGAATTATCGATTCCTTAGGTGTTTTA
TCTGAGAAATTTGGTAAAAGAGCTGGAAACATGAAGATGGCTTCGTTAGCAGCTTACTTT
GATCTCGGGGAGCAAAAACACAGGAGCTTAGACGATGTTCGGATGAATTTGGAAGTCCTA
AAACATTGTGCAACAGTTCTATTTCTTGTATGTTTTTGTAACTTATCTTATCGTGGCAAA
ACTACTTCCAAGAATCAAGTCTACCAGATTTGTCAATTGGGAACTGTCAAGGCACAACCA
GCATTACTACAAGAAGTAGAAGCCAAGTGGTATCAAAATATTCCAAGTTCTCCGATCGAT
AAGTGGCAGAGTAGTCCTTCCTCAATAACAACAAGGAGTAGTAGCAGAGGGAAATTTCCG
TGCAGAGAAGAAACAAGCCGGAAATCTCCTCCATCGACAAGTGCTGTTGGATATCAAAGA
ACTGTTCCTTATGCAAGACAGAGCTTGGGAAAGGTGACTGCAGGTGTGAGGAACTTGTTG
TGTAAAGCTCAAAACAAGCCTCTGAATACTTTACTAAAGCATTCGCAGACTCTCTTCTGA

Peptide Sequence

PEP ID

Solyc04g054720.3.1
PEP Infomation

APOLLO (AHRD V3.3 *-* U5U5S3_9BRAS)
Sequence

MVVCSRKLVELESYCTLIRPGDLSVVGLKSGRVGGITRKAVADAPSFEHVAQKIFNILDG
RIWAGHNIQRFDCVRIKAAFAEIGYPAPVPVGIIDSLGVLSEKFGKRAGNMKMASLAAYF
DLGEQKHRSLDDVRMNLEVLKHCATVLFLVCFCNLSYRGKTTSKNQVYQICQLGTVKAQP
ALLQEVEAKWYQNIPSSPIDKWQSSPSSITTRSSSRGKFPCREETSRKSPPSTSAVGYQR
TVPYARQSLGKVTAGVRNLLCKAQNKPLNTLLKHSQTLF*

Transcript Sequence

Transcript ID

Solyc04g054720.3.1
Transcript Infomation

APOLLO (AHRD V3.3 *-* U5U5S3_9BRAS)
Sequence

AAACCTGGACAGAAATTTTGGGTGTTGGAGTTTGGTGCAATGGTAGTTTGTTCAAGAAAG
CTCGTTGAACTTGAGAGCTACTGCACCCTTATTAGGCCAGGGGATTTGTCAGTTGTTGGA
TTAAAGTCAGGGAGAGTCGGTGGTATTACGCGAAAAGCAGTTGCTGATGCACCTTCATTT
GAACATGTTGCACAAAAGATCTTCAACATTTTGGATGGTAGGATTTGGGCAGGTCATAAC
ATACAGAGATTTGATTGTGTTCGTATTAAAGCTGCTTTCGCTGAAATTGGTTACCCTGCA
CCTGTGCCTGTTGGAATTATCGATTCCTTAGGTGTTTTATCTGAGAAATTTGGTAAAAGA
GCTGGAAACATGAAGATGGCTTCGTTAGCAGCTTACTTTGATCTCGGGGAGCAAAAACAC
AGGAGCTTAGACGATGTTCGGATGAATTTGGAAGTCCTAAAACATTGTGCAACAGTTCTA
TTTCTTGTATGTTTTTGTAACTTATCTTATCGTGGCAAAACTACTTCCAAGAATCAAGTC
TACCAGATTTGTCAATTGGGAACTGTCAAGGCACAACCAGCATTACTACAAGAAGTAGAA
GCCAAGTGGTATCAAAATATTCCAAGTTCTCCGATCGATAAGTGGCAGAGTAGTCCTTCC
TCAATAACAACAAGGAGTAGTAGCAGAGGGAAATTTCCGTGCAGAGAAGAAACAAGCCGG
AAATCTCCTCCATCGACAAGTGCTGTTGGATATCAAAGAACTGTTCCTTATGCAAGACAG
AGCTTGGGAAAGGTGACTGCAGGTGTGAGGAACTTGTTGTGTAAAGCTCAAAACAAGCCT
CTGAATACTTTACTAAAGCATTCGCAGACTCTCTTCTGATGAACAAGAAGAATCGATCCT
TCTCTCATTTATCGGAATTCAAGCATAAGGGGTGCATATATACCTACAAGTTCACTTTCT
TGGAAAATGCCTGGAGGAATTCTTTTTGGTCCACTATGTGCCTCTTGATGGAAAATTCAC
TCAGTTCCAAGTTAACGAATCTATATTCTTTGGTAACTGATTCTTCAAGTTGTGGAGTTC
TCTGTAAATGTTTGTACCTCTCAATGAATAAATTTCAGCTGATATTCTTTGATTTGAGCC
AAGTGAAAAGCTAGCTAACGTTCTAAAGATCGCGTTAAACTGGCATTAGATGTATGTAAC
TGAGCCCCAATGTAGGCGAAATTGACTCACATATGATACAGATTGAAGCATCAAACATAC
ACATACACACAAAAGGAGAATCAAGTACTGATCGATTCACCATTGAGAACATTTACTTGC
AAAAACACGAATATTATGGTGTTCTAACATTGGCAGATCAAACAAGAAGCATGTTCTTAC
TAGTCAAACATGCCTCAATGACTTCACTAATGTCAAAAGGACCTTCCCTTCAGTTTTCTT
CAAAAAAATTGGTTAGCCTTAATTTGTGCATCACATGACACATTGAGTTGATTAGAGCCA
ACTGCAAAACAAACATAAACATTAACTGATTCA