Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g054410.3.1
CDS Infomation	Regulation of nuclear pre-mRNA domain-containing 1B (AHRD V3.3 *** A0A0B0P8L0_GOSAR)
Sequence	ATGAATAGTATTTTGAATGAACAAACTCTTACAGACAAGCTTTCAAAGCTTAACACCACT CAGCAGTGCATTGAAACATTGTCCCATTGGTGCATTTTCCACCAAGATAAAGCAGAGCTG GTTGTTACAACATGGGGTAAACAGTTCCACAGTTCCGAAATGACTAAGAAAGTCCCTTTA CTGTACCTTGCAAATGACATCCTGCAAAACAGCAAGCGTAAAGGAAATGAGTTTGTCATC GAATTTTGGAAGGTTCTTCCTGCAGCACTCAAGGAGATTGTCGGAACAGGCGATGAACAT GGAAAGAATGTAGTTTCCAGATTGGTTAAAATATGGGAAGAAAGGAAGGTTTTTGGATCT CAAACACAGAGCCTAAAAGATGTAATGCTTGGAGAAGAGCTGCCACCACCACTGGAGCTT GGAAAAAAGCGAAGTCGTTCTGTCAAAATAGTTAAAAGGGACACGCGGTCCATAAGAACG AAATTGACTGTTGGAGGAACAGCTGAAAAAATAGTGTCAGCATTGCACTTGGTAGTCAGT GAGCATTCTACTGAAGATGAAGAAATGAGTAAATGCAAGTCTGCTGTTCACCATGTACGA AAGATGGAAAAGGATGTTGACGTGGCCCTTGCAAGAGCAAAACATCCAATGCGAAAAACC TTGTCCAAAGAACTGGAGGAGGAAGAAAGGATGTTGAAACAATCCATTGAGAAACTAAAA GTTGTTGAGACCAATAGATTGACCCTTGTTTCACAGTTAAGGGAAGCATTAACTGAACAG GAATCTGAACTAGAGAACGTTCGGACTCAGATACAGGTGGCGGAAGCACAGGCGGGGGAA GCCAGCAACATGCGGAAGTATCTGGATGATGAAGATTATGTGGGAGAAAGAAAGCCTTTG GGTACAACAACTTCACCAGACATCTATGGAAAAGCAGGAGAAACAAGCAAGAAAACAGCT GCAGCAATCGCAGCCGAGGTAGCTGACAAGCTTACAGCTTCTAGCTCCTCTCAGTATATC ATGTCGTCCGTGCTCTCTACATTTGCTGCTGAGGCAGCAAAATCAGCCGGGCTTGCAAAA CCTTCATCATATCTGACCAGCAACAGTTACATTTCACATCCAGAAAACACTCTATCTGAT TCAAATGCTTTAATGTCAGCACAGCTACCTAATCCTCCCCCAAGTAACCCGTATCAGTCC ATGCTGGCTCCTCATCCCACAGTGCATCAGGGTCAGTATCATTCACTTGCTAATCCAACA TCCCAGCAGTATTTACAGCCGTCAGCAGGAATGATGAGCCCTTATAGTTATGGGAGTATT GCTGCCTTGCCATCTGTACCACCTCCACCACCTCCACCAGCACCTCCGTCGTATATGACT ATGACACAGCAACCATTGTCGATGATGCAGCAGGGTGCAGCAGCACAACAGCAACAACCA CCATTACCTCAACAACCTCCCCCTCCTAATTTCCGTCCTGTCACACCTGTCCAGCCTCCT GGAATGCTGTACTATTCTCAACCATATCATTCACAACAGTGA

Peptide Sequence

PEP ID	Solyc04g054410.3.1
PEP Infomation	Regulation of nuclear pre-mRNA domain-containing 1B (AHRD V3.3 *** A0A0B0P8L0_GOSAR)
Sequence	MNSILNEQTLTDKLSKLNTTQQCIETLSHWCIFHQDKAELVVTTWGKQFHSSEMTKKVPL LYLANDILQNSKRKGNEFVIEFWKVLPAALKEIVGTGDEHGKNVVSRLVKIWEERKVFGS QTQSLKDVMLGEELPPPLELGKKRSRSVKIVKRDTRSIRTKLTVGGTAEKIVSALHLVVS EHSTEDEEMSKCKSAVHHVRKMEKDVDVALARAKHPMRKTLSKELEEEERMLKQSIEKLK VVETNRLTLVSQLREALTEQESELENVRTQIQVAEAQAGEASNMRKYLDDEDYVGERKPL GTTTSPDIYGKAGETSKKTAAAIAAEVADKLTASSSSQYIMSSVLSTFAAEAAKSAGLAK PSSYLTSNSYISHPENTLSDSNALMSAQLPNPPPSNPYQSMLAPHPTVHQGQYHSLANPT SQQYLQPSAGMMSPYSYGSIAALPSVPPPPPPPAPPSYMTMTQQPLSMMQQGAAAQQQQP PLPQQPPPPNFRPVTPVQPPGMLYYSQPYHSQQ*

Transcript Sequence

Transcript ID	Solyc04g054410.3.1
Transcript Infomation	Regulation of nuclear pre-mRNA domain-containing 1B (AHRD V3.3 *** A0A0B0P8L0_GOSAR)
Sequence	TTTTTATTTGGTCCTCCTCAATCAATCGAGTATTGATTTATTTTTTCTAGACAATAAAAT AGTCTACAGACCAAATATTCTTTAAAAAATAATACAATTACTCATCTAATTTCTCAATTT GATAATATCAACAACATCAAACAATCCCCTAATTTTAGCTCTTGTTTCTCTAGATTTTCT TTTATCTAGTGTGATTTATAAATTATAAAGTACATTATATTTGTATCATATTTCTGTACA TAATTTCTTAACAAATGCTTTCACTTTTGATATTTACTTATTTGGTAATTACCGTACAAT AAAATCAAATAATCAATACAATAATACATAAAAATACGATTTTATCCTAATTTTTTGTCC TAAAAAGACGATTTTTCCAAAATCTCACAATAATATATGAAAAAAAAAATCCTTTTAAAG AAAAATTATTTAAAAAAAGAAGAAGAAGAAAATAGATGGCAAGACAATTAACATATTTTT CCAAAATGCTTACAAAAATATATGAAATAAAAGAAAATACCCTTAAAGAAAAATAAATAA AAAAGAAAATAGATGGCAAGACAATTAACATAGCAGAAAAAGCATGTAGACTGGTAGAAG GCTAAAAAATGTGAATTATATTTATACAAATAGATTTGTTGAAATCCAGAAAAGGTTAAA ATATGAAACATTAAGAATCACTTTGTCTTTCTTCCCTCCCTTCTCTTGTTCTTATATATA TACGTTTTGTTTTGTTCATTCACTTTGTATCACAACGCCCAAAAACTCTTCTTTTTCAGT CTTTTTTCGTGATGGGGTTGCCCAATTCTAAACCTTCTTCATACAAAGCCCCATTCTTGG TTTAATTTCATTCTTCAGATTTGCTAATCTTGATTTTTGGTTCTTGATTGAAAGTTGAAA ACTTTATTAGTTTTGGGGTTGTTTCTAGGGTTTTTCTTTACTTGTTCAAATGGAATTTAC CAAAATTTTGAGTATTTGTTTTCAGTTTGGAATCAGCATTTGCTCAATTGGATGGTTTTG GGATAACCCCTTTTGATTTCTTGGATTAAAGATTGAAACTTTGTTCGAATTATTTGTTTC CATCAGTTGTTTTTCTTGGTTTGTTGTTGTTTTTAGGTTCTGAATTGATTTCGTCAACTT TTTTGGTGAAGAGGGAAGGTAGGATGAATAGTATTTTGAATGAACAAACTCTTACAGACA AGCTTTCAAAGCTTAACACCACTCAGCAGTGCATTGAAACATTGTCCCATTGGTGCATTT TCCACCAAGATAAAGCAGAGCTGGTTGTTACAACATGGGGTAAACAGTTCCACAGTTCCG AAATGACTAAGAAAGTCCCTTTACTGTACCTTGCAAATGACATCCTGCAAAACAGCAAGC GTAAAGGAAATGAGTTTGTCATCGAATTTTGGAAGGTTCTTCCTGCAGCACTCAAGGAGA TTGTCGGAACAGGCGATGAACATGGAAAGAATGTAGTTTCCAGATTGGTTAAAATATGGG AAGAAAGGAAGGTTTTTGGATCTCAAACACAGAGCCTAAAAGATGTAATGCTTGGAGAAG AGCTGCCACCACCACTGGAGCTTGGAAAAAAGCGAAGTCGTTCTGTCAAAATAGTTAAAA GGGACACGCGGTCCATAAGAACGAAATTGACTGTTGGAGGAACAGCTGAAAAAATAGTGT CAGCATTGCACTTGGTAGTCAGTGAGCATTCTACTGAAGATGAAGAAATGAGTAAATGCA AGTCTGCTGTTCACCATGTACGAAAGATGGAAAAGGATGTTGACGTGGCCCTTGCAAGAG CAAAACATCCAATGCGAAAAACCTTGTCCAAAGAACTGGAGGAGGAAGAAAGGATGTTGA AACAATCCATTGAGAAACTAAAAGTTGTTGAGACCAATAGATTGACCCTTGTTTCACAGT TAAGGGAAGCATTAACTGAACAGGAATCTGAACTAGAGAACGTTCGGACTCAGATACAGG TGGCGGAAGCACAGGCGGGGGAAGCCAGCAACATGCGGAAGTATCTGGATGATGAAGATT ATGTGGGAGAAAGAAAGCCTTTGGGTACAACAACTTCACCAGACATCTATGGAAAAGCAG GAGAAACAAGCAAGAAAACAGCTGCAGCAATCGCAGCCGAGGTAGCTGACAAGCTTACAG CTTCTAGCTCCTCTCAGTATATCATGTCGTCCGTGCTCTCTACATTTGCTGCTGAGGCAG CAAAATCAGCCGGGCTTGCAAAACCTTCATCATATCTGACCAGCAACAGTTACATTTCAC ATCCAGAAAACACTCTATCTGATTCAAATGCTTTAATGTCAGCACAGCTACCTAATCCTC CCCCAAGTAACCCGTATCAGTCCATGCTGGCTCCTCATCCCACAGTGCATCAGGGTCAGT ATCATTCACTTGCTAATCCAACATCCCAGCAGTATTTACAGCCGTCAGCAGGAATGATGA GCCCTTATAGTTATGGGAGTATTGCTGCCTTGCCATCTGTACCACCTCCACCACCTCCAC CAGCACCTCCGTCGTATATGACTATGACACAGCAACCATTGTCGATGATGCAGCAGGGTG CAGCAGCACAACAGCAACAACCACCATTACCTCAACAACCTCCCCCTCCTAATTTCCGTC CTGTCACACCTGTCCAGCCTCCTGGAATGCTGTACTATTCTCAACCATATCATTCACAAC AGTGAGAGAGGAGTACTCTTTTCAAACTGACCATTACTTCTTGGTATCAGAAACAACAAA TTTCTAGATGTGAACAATAGGAGGTTCGTTGGACAAATCATGAATCGATGCATAGTGTTA TATACAGGGCAAGGAGCAGCTGATAGTGCAGGTAATAGATATTACCATTAGTGTTTATTT TGCCATCTTCAAGACAGTTTAGAAAATTCTGCGATGATGATCGTCTTCATCCGATGTTGT TATTGTTGATTCCTTTAGGATTCTTTTTCTGTTTTTACTTTTCATCATACATGTAACATT AGCATGATGGCTGCTGAGAATTTTGTATTACTAGTTAAACAGGATAGAAGAACTAGGTTT TTCTGTCTCCCATAAACTTGGTAAATGAAATAGCCAGCTTTGTTTTCATAACATTTCTGT TTTCGGTAAAAAAAAAGGTCAGTTATGAAATGCCAAGTCTAAGGGTGTGTTGTGGAAGAA CTTTTTTCCATCCTCCAACATGGATGACTCATTGTGCATTTGAGGGGTTTTAAGTGGTAT CGTTGTTGCGTTTTTAACTACTTCAATTGTTTGTCACAATGCCTATAGTTTAATGTTTAA AAGTACGTAATACTAGTAAGTATCCAAAACTTCAAAGGATGCATAAGCACGGGAGCTTGC TATTAATCGTAGTATCGGTAGGTTTTGAC