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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g054370.1.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1)
Sequence

ATGGCTGCTCTTTCTCAGCTCTTAGCTCATATCTACACCATGACTCTAGTCTTCGTCACC
ATTCTCATACTCGAACTCGTAATCTTAGTACGTTCCATAACCGACACAATCTCAGATTCC
GGCCGCGGCCGCCCCATCACAACCAAGCAATACCTCAAACTCATCGACGAAAAAAACCCG
GTCAGCCGGTTCAAAACCCCCTCAATCAACCCGGCCGGTTTTTCCGATACCTGTGCCGTT
TGTTTATCGGCATTTGAAGACGGCGAACAAGTACGGAAGCTGAAATGCAAGCATATTTTT
CACAAGGATTGTTTGGACACGTGGCTCCAACAAGATTCTGCCACGTGTCCGCTCTGCCGG
AATAAGGTGCTGCCGGAAGAAATTGTGGTTAAATTCCGGCAGCACCGTAACCTGCAGACG
GAGTATGAAGGAAGTGATGAGGAGCTCATTTTTTTGTTATCTGCATTACATGGTAATTAT
ATTGGTAGATTTTTGTAA

Peptide Sequence

PEP ID

Solyc04g054370.1.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1)
Sequence

MAALSQLLAHIYTMTLVFVTILILELVILVRSITDTISDSGRGRPITTKQYLKLIDEKNP
VSRFKTPSINPAGFSDTCAVCLSAFEDGEQVRKLKCKHIFHKDCLDTWLQQDSATCPLCR
NKVLPEEIVVKFRQHRNLQTEYEGSDEELIFLLSALHGNYIGRFL*

Transcript Sequence

Transcript ID

Solyc04g054370.1.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1)
Sequence

ATGGCTGCTCTTTCTCAGCTCTTAGCTCATATCTACACCATGACTCTAGTCTTCGTCACC
ATTCTCATACTCGAACTCGTAATCTTAGTACGTTCCATAACCGACACAATCTCAGATTCC
GGCCGCGGCCGCCCCATCACAACCAAGCAATACCTCAAACTCATCGACGAAAAAAACCCG
GTCAGCCGGTTCAAAACCCCCTCAATCAACCCGGCCGGTTTTTCCGATACCTGTGCCGTT
TGTTTATCGGCATTTGAAGACGGCGAACAAGTACGGAAGCTGAAATGCAAGCATATTTTT
CACAAGGATTGTTTGGACACGTGGCTCCAACAAGATTCTGCCACGTGTCCGCTCTGCCGG
AATAAGGTGCTGCCGGAAGAAATTGTGGTTAAATTCCGGCAGCACCGTAACCTGCAGACG
GAGTATGAAGGAAGTGATGAGGAGCTCATTTTTTTGTTATCTGCATTACATGGTAATTAT
ATTGGTAGATTTTTGTAA