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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g054280.2.1
CDS Infomation

auxin-related IAA23
Sequence

ATGGAGAGAGATTTGAATCTTAGATTGGGTTTGCCAGGGAGAGAGGAAGATCAATATGAT
CACCAACAAATTATGTCCATATCCAAGAACAACAAAAGAGCTTTGTCTGAATATGAAGAT
GATGAAGCCACAACACCTCGTGTTACCAAGGTGCAAATAGTGGGGTGGCCACCAGTGAGA
TGTTACAGGAAGAATACCTTACAAAATACAACAAAGCAAACAGAAGATCAGTGTGGAATT
TATGTGAAAGTTAGCATGGATGGAGCCCCTTTTTGTAGAAAAATTGATCTTAAAATGTAC
AAGTGTTACACTCAACTCCTTAAAGCAATGGAGAAAATGTTCAAGCTAAAAAAAGGTGAA
TTTTCACCTACTTATGAAGATAAAGATGGTGATTTGATGCTTGTTGGAGATGTTCCTTGG
GAAATGTTCATGTCATCATGCAAGAGACTGAGGATAATGAAAAGATCAGAAGCAAGAGGT
TTGGGATCATGTGGACTATGA

Peptide Sequence

PEP ID

Solyc04g054280.2.1
PEP Infomation

auxin-related IAA23
Sequence

MERDLNLRLGLPGREEDQYDHQQIMSISKNNKRALSEYEDDEATTPRVTKVQIVGWPPVR
CYRKNTLQNTTKQTEDQCGIYVKVSMDGAPFCRKIDLKMYKCYTQLLKAMEKMFKLKKGE
FSPTYEDKDGDLMLVGDVPWEMFMSSCKRLRIMKRSEARGLGSCGL*

Transcript Sequence

Transcript ID

Solyc04g054280.2.1
Transcript Infomation

auxin-related IAA23
Sequence

GGTTATGTTACCACATCAAAGCTCATATATTATGTTATGTACCACGTACAATCTCAAACT
TCTATCTTTACATAAACACTTCACTTTTATCTTCTTCTTTGTTTGGAATGTACAATTTGT
CTGCGCTAGCATTGTTCTTTTATTTTTATTTTGTAACTTGCTAATTTAAAAAATTTGTTA
GTTTTTTGTTGCCCACTCTGATCAGTCTCAAAATATCTGTCGTCCTTATTAAAAATATTT
GGCATTTTTATAATTCTTAAGTATTGTGAAACAAAAAGAGGAATACTTTAAACGGTACTT
TCTTTATTACAAAGTTTCTCATCATTTGAGTGCTACTTTTACATAAATAAAAAACCAAAG
ATCATATAGTAATTTCTTTGAATACACTCATCTCCCCTACCCTAATCATTTTTTTTTGAC
AACAAAAATATGAACACAAGTTAATAATTAATTGAATTGTTCTTCAAAGACTAGACAAGA
ATATTATATATTTATGATGGTATCGAAACATAATTTAATATATGTTATTTTACTTTTTAG
TCCTTCAACAACATTTATAAACAAGGGATTGTCGATATAAAACATTTTTTACAAAAAAAT
TATACATTTCTAACATACATGAGTCAAATATTATACTGTATACATAGCAAATCTTGATAA
TTAGAAAATTTCATTGGTTAAAAAAGTATAAAGAGAGGTACTCGTGAGATAATTACATTA
CTATCATCAAAGATTGTGATAACTAGAATTGACAGGATCCTTTTTATCTTAATAAAAAAT
TTCGTGTTCAAATTTTAAAAATAAAAATATCTCAATAGAAAATATTTCTCTCTTTAATAA
GCACTACACAAGGTAAATCTGAATTAATCGATACGCTATACCATGAATAGTAACGAATAT
GAAAGAGAAAATAAAGTACAATTTGTACTCTTGAAGTGTAGCATCTGGTTCCCTTTTTCT
TCACTTCTCTCTATAAATTTCATTTATTTATACACTATACTAAATTAATTTAGGTTGAAA
CATTCCACGTCAAGAAATTTTATATTTTAGAATATTTAAACTAGAGACGTTCGATTAAGA
AAAGAAATTGCAACCATCATATATAGGATCTATCGTTTTCTTTTGGCCAAATACACCATT
GGTCTTTTGTAATTGCACCACCTTTTATTTAAACATATCAATTGAGCTTTATTTATTACA
CACTTCAATTTCAGTCGATGCATATCTATTAAACTCTTTTAGACTCTTGAATTGTCAAAA
AAATAAAACAATAGTGTGTGAGCTTGTCTCTTTCTTGTCCCCTAAATGTTGAAAGTTGCT
ACTCTTCCTTCCAACAAGCTTAGTTTGTCTTTGTCCCAAATTTATGTACTTTTTCAAACA
TATTTTTTTTAAAAAAAATAACTCTTCACCCTTTACTTCTTCCCATTGTATAAAAACCAA
CACAAAAACTATTTTCTTGAACATAAATACAAAGTCAAAAACAAGGAAGTGTTAAAATTT
GGGGCTTATTGTTTGAGGAAAATGGAGAGAGATTTGAATCTTAGATTGGGTTTGCCAGGG
AGAGAGGAAGATCAATATGATCACCAACAAATTATGTCCATATCCAAGAACAACAAAAGA
GCTTTGTCTGAATATGAAGATGATGAAGCCACAACACCTCGTGTTACCAAGGTGCAAATA
GTGGGGTGGCCACCAGTGAGATGTTACAGGAAGAATACCTTACAAAATACAACAAAGCAA
ACAGAAGATCAGTGTGGAATTTATGTGAAAGTTAGCATGGATGGAGCCCCTTTTTGTAGA
AAAATTGATCTTAAAATGTACAAGTGTTACACTCAACTCCTTAAAGCAATGGAGAAAATG
TTCAAGCTAAAAAAAGGTGAATTTTCACCTACTTATGAAGATAAAGATGGTGATTTGATG
CTTGTTGGAGATGTTCCTTGGGAAATGTTCATGTCATCATGCAAGAGACTGAGGATAATG
AAAAGATCAGAAGCAAGAGGTTTGGGATCATGTGGACTATGA