Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g053120.3.1
CDS Infomation

4-alpha-glucanotransferase (AHRD V3.3 *** K4BSG9_SOLLC)
Sequence

ATGGCAATTCACACTTGTTTCACACTAATACCTTCTTCTTTATCTTCTCCCAAATTGCCA
TTTCCCAAAAACACTATCTTCCCAAAATTATCAAAACCCACTTTCATGTTTGATCGGAAA
AGTTCCTTTCAAAATGGCACCGCTGCTGTTCCTGCTGTAGGCGAGGATTTTCCGATTGAT
TATGCTAATTGGCTGCCAAAACGAGACCCAAACGATCGTAGAAGAGCGGGAATTTTGCTT
CATCCTACCTCGTTTCCTGGACCTTATGGTATTGGTGACCTAGGCCCCGAAGCTTTTAAG
TTCCTTGATTGGCTTCATCTTGCTGGTTGCTCCCTTTGGCAGGTTCTTCCACTTGTACCG
CCTGGAAAGAGAGGCAATGAAGATGGATCACCCTATTCAGGACAGGATGCAAATTGTGGT
AACACACTTCTGATTTCTCTTGAAGAGCTTGTTGATGATGGTTTACTGAAGAAGGAGGAG
CTTCCGGAGCCACTACCTACAGATCGTGTCAATTACTCGACTATATCTGAGATAAAAGAT
CCTTTAATAACCAAGGCAGCAAAGAGGCTTCTCTCCAGTGAAGGGGAACTGAAAGACCAG
CTTGAGAAATTTCGTCGGGATCCAAATATTTCGAGTTGGCTGGAGGATGCTGCTTATTTT
GCTGCCATAGACAACTCTGTAAACACTATTAGCTGGTATGATTGGCCTGAACCATTGAAA
AATCGCCATCTTGGAGCTCTAGAAGAAGTTTATCAACGTGAAAAGGATTTTATTGACATA
TTCATTGCACAACAGTTCTTGTTCCAACGACAATGGAAAAAAGTTCGTGACTATGCACGA
TCCAAAGGGATCAGTATAATGGGAGACATGCCAATATATGTTGGATATCACAGTGCTGAT
GTTTGGGCCAACAAGAAACAATTTTTGCTGAATAGGAAAGGTTTCCCTCTTATAGTTAGT
GGTGTTCCTCCAGACGCCTTTAGTGAAACTGGTCAACTATGGGGCAGCCCTCTCTATGAT
TGGAAAGCCATGGAGAAGGATGGATTTTCATGGTGGGTACGCCGAATTCAACGTGCAATG
GATCTTTTTGATGAATTTAGGATAGATCACTTTAGAGGATTTGCTGGATTTTGGGCTGTT
CCCTCTGAGGAAAAAATTGCAATTCTGGGACGGTGGAAGGTGGGACCTGGAAAACCTTTG
TTTGATGCTATCTTACAAGCTGTTGGGAAGATCAATATTATAGCAGAAGACTTGGGAGTA
ATTACCGAGGACGTTGTTCAGCTAAGAAAGTCCATTGAGGCACCTGGAATGGCTGTACTC
CAGTTTGCATTTGGCAGTGATGCTGAAAACCCTCATTTGCCTCACAATCATGAGCAGAAC
CAAGTAGTGTATACTGGAACGCATGACAATGATACAATCCGAGGTTGGTGGGATAATTTG
CCACAGGAAGAGAAATCCAATGTACTAAAGTATTTATCAAATATTGAGGAAGAGGATATA
TCATGGGGCTTGATCGAAGGTGCAGTTTCTTCTGTAGCCCGTATTGCAATTATACCGATG
CAGGATGTTCTTGGGCTTGGGAGTGATTCCAGAATGAACATTCCAGCAACTCAGTTTGGA
AACTGGAGTTGGAGGATACCTAGTTCAACTAGCTTTGACAGCCTGGATGCAGAAGCAAAA
AAGCTAAGAGATATACTTGCAACTTATGGGCGGTTGTGA

Peptide Sequence

PEP ID

Solyc04g053120.3.1
PEP Infomation

4-alpha-glucanotransferase (AHRD V3.3 *** K4BSG9_SOLLC)
Sequence

MAIHTCFTLIPSSLSSPKLPFPKNTIFPKLSKPTFMFDRKSSFQNGTAAVPAVGEDFPID
YANWLPKRDPNDRRRAGILLHPTSFPGPYGIGDLGPEAFKFLDWLHLAGCSLWQVLPLVP
PGKRGNEDGSPYSGQDANCGNTLLISLEELVDDGLLKKEELPEPLPTDRVNYSTISEIKD
PLITKAAKRLLSSEGELKDQLEKFRRDPNISSWLEDAAYFAAIDNSVNTISWYDWPEPLK
NRHLGALEEVYQREKDFIDIFIAQQFLFQRQWKKVRDYARSKGISIMGDMPIYVGYHSAD
VWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWVRRIQRAM
DLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKVGPGKPLFDAILQAVGKINIIAEDLGV
ITEDVVQLRKSIEAPGMAVLQFAFGSDAENPHLPHNHEQNQVVYTGTHDNDTIRGWWDNL
PQEEKSNVLKYLSNIEEEDISWGLIEGAVSSVARIAIIPMQDVLGLGSDSRMNIPATQFG
NWSWRIPSSTSFDSLDAEAKKLRDILATYGRL*

Transcript Sequence

Transcript ID

Solyc04g053120.3.1
Transcript Infomation

4-alpha-glucanotransferase (AHRD V3.3 *** K4BSG9_SOLLC)
Sequence

TCGACATTATGAGGTGTATCACATGCTTCTTGTCTCCCCACCGCAACACCTTACTCAACT
TCCTACTCCACTCCACTTTGCTCCTTCCCATTTGCAAGCCAAAAACGGCAATCCCATTTT
CTTCAATCCAAATCAATAATATGAAGAAATAACATTCAACAATCCTCACTTATTCTCATT
ATTATCAATGGCAATTCACACTTGTTTCACACTAATACCTTCTTCTTTATCTTCTCCCAA
ATTGCCATTTCCCAAAAACACTATCTTCCCAAAATTATCAAAACCCACTTTCATGTTTGA
TCGGAAAAGTTCCTTTCAAAATGGCACCGCTGCTGTTCCTGCTGTAGGCGAGGATTTTCC
GATTGATTATGCTAATTGGCTGCCAAAACGAGACCCAAACGATCGTAGAAGAGCGGGAAT
TTTGCTTCATCCTACCTCGTTTCCTGGACCTTATGGTATTGGTGACCTAGGCCCCGAAGC
TTTTAAGTTCCTTGATTGGCTTCATCTTGCTGGTTGCTCCCTTTGGCAGGTTCTTCCACT
TGTACCGCCTGGAAAGAGAGGCAATGAAGATGGATCACCCTATTCAGGACAGGATGCAAA
TTGTGGTAACACACTTCTGATTTCTCTTGAAGAGCTTGTTGATGATGGTTTACTGAAGAA
GGAGGAGCTTCCGGAGCCACTACCTACAGATCGTGTCAATTACTCGACTATATCTGAGAT
AAAAGATCCTTTAATAACCAAGGCAGCAAAGAGGCTTCTCTCCAGTGAAGGGGAACTGAA
AGACCAGCTTGAGAAATTTCGTCGGGATCCAAATATTTCGAGTTGGCTGGAGGATGCTGC
TTATTTTGCTGCCATAGACAACTCTGTAAACACTATTAGCTGGTATGATTGGCCTGAACC
ATTGAAAAATCGCCATCTTGGAGCTCTAGAAGAAGTTTATCAACGTGAAAAGGATTTTAT
TGACATATTCATTGCACAACAGTTCTTGTTCCAACGACAATGGAAAAAAGTTCGTGACTA
TGCACGATCCAAAGGGATCAGTATAATGGGAGACATGCCAATATATGTTGGATATCACAG
TGCTGATGTTTGGGCCAACAAGAAACAATTTTTGCTGAATAGGAAAGGTTTCCCTCTTAT
AGTTAGTGGTGTTCCTCCAGACGCCTTTAGTGAAACTGGTCAACTATGGGGCAGCCCTCT
CTATGATTGGAAAGCCATGGAGAAGGATGGATTTTCATGGTGGGTACGCCGAATTCAACG
TGCAATGGATCTTTTTGATGAATTTAGGATAGATCACTTTAGAGGATTTGCTGGATTTTG
GGCTGTTCCCTCTGAGGAAAAAATTGCAATTCTGGGACGGTGGAAGGTGGGACCTGGAAA
ACCTTTGTTTGATGCTATCTTACAAGCTGTTGGGAAGATCAATATTATAGCAGAAGACTT
GGGAGTAATTACCGAGGACGTTGTTCAGCTAAGAAAGTCCATTGAGGCACCTGGAATGGC
TGTACTCCAGTTTGCATTTGGCAGTGATGCTGAAAACCCTCATTTGCCTCACAATCATGA
GCAGAACCAAGTAGTGTATACTGGAACGCATGACAATGATACAATCCGAGGTTGGTGGGA
TAATTTGCCACAGGAAGAGAAATCCAATGTACTAAAGTATTTATCAAATATTGAGGAAGA
GGATATATCATGGGGCTTGATCGAAGGTGCAGTTTCTTCTGTAGCCCGTATTGCAATTAT
ACCGATGCAGGATGTTCTTGGGCTTGGGAGTGATTCCAGAATGAACATTCCAGCAACTCA
GTTTGGAAACTGGAGTTGGAGGATACCTAGTTCAACTAGCTTTGACAGCCTGGATGCAGA
AGCAAAAAAGCTAAGAGATATACTTGCAACTTATGGGCGGTTGTGATGATGAATGATGAT
TAACATGTTATGGCACCTGGGAATCAGTGGAGGGGAGGACCTAGGGCGTAAGGACGTTGT
AAGGCTTGGGACACAAATTGCTGAGAGCATAAACGATCGAAACAAGGTTTTCCTGCCACA
GTTCACCTAATTGCTGCAAAGGAACGCCTGCGGGTTTCAATTTTCTGAACTTAACGCTTA
CTGGGGAAGCAGACAAGGAAAGCTAAAACGCGTGCTTTGGATTCTATTATTCTACATTAG
CCGGTATAAACTACAAATGCTAGAGCCTTTCCATATTTATGCAGAAACACTTCATAGTTT
GAATGTCAACTGACCTAAAAATAAATAATGCATGTTTCTGTATCTAATATTTGGTCGAAA
TAACATGAAAAATTCCTTCTTGTTCCGTCTTTCTTGGAGAAATATATGAAGGCTACTCAT
TTAGATTTTAAGT