Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g051350.3.1
CDS Infomation

Ribonucleoside-diphosphate reductase (AHRD V3.3 *** K4BS95_SOLLC)
Sequence

ATGTATGTGGTGAAGAGAGATGGGCGTCAGGAAACTGTTCACTTTGATAAGATTACTGCT
AGGCTTAAGAAATTGAGTTATGGGCTTAGTACGGATCATTGTGATCCAGTTCTTGTTTCT
CAGAAGGTTTGTGCTGGTGTTTACAAGGGTGTAACTACTAGTCAGCTTGATGAATTGGCT
GCGGAAACTGCTGCTGCTATGACTGCTAATCATCCTGATTATGCATGTCTGGCTGCAAGG
ATTGCTGTGTCCAACCTGCACAAGAACACCAAGAAATCATTTTCTGAGACGATTAAGGAC
ATGTACTACCATGTCAGTGAGAGATCTGGATTGAAGGCACCACTTGTTTCTGATGAAGTT
TATGAGATAATCATGAAGAATGCTGCTCGTCTGGACAGTGAGATCATATACGACAGAGAC
TTTGACTATGATTACTTTGGTTTCAAAACCCTTGAAAGGTCTTACCTTTTAAAGATTCAG
GGAAAGATTGTGGAAAGGCCACAACATATGCTGATGAGAGTATCTGTTGGAATCCACAAA
GAGGATATTGAATCTGTCATCAAGACATATCATTTGATGTCTCAACGCTGGTTCACTCAT
GCATCTCCAACACTATTTAATGCTGGCACTCCAAGGCCTCAATTAAGTAGCTGCTTCCTG
ATATGCATGAAAGATGATAGCATTGAGGGCATATATGATACTCTTACGGAATGTGCTGTT
ATTAGCAAATCAGCTGGGGGAATTGGCGTATCTGTGCACAACATACGTGCTACTGGGAGT
TATATTCGTGGAACAAACGGAACATCAAATGGGATTGTTCCTATGCTGCGTGTGTTTAAT
GATACTGCCAGATATGTTGATCAAGGGGGTGGCAAAAGAAAGGGCGCTTTTGCTGTCTAC
CTTGAGCCTTGGCATGCTGATGTATTTGAATTTCTGGATTTAAGAAAAAACCATGGGAAG
GAAGAGAATCGGGCACGAGATCTTTTCTATGCTCTTTGGGTGCCAGATCTATTTATGCAA
AGAGTCCAAAGCAATGGGATATGGTCTTTGTTTTGTCCAAATGAGGCTCCTGGATTGGCA
GATTGCTGGGGTGAAGATTTTGAGAAGCTGTACACAAAATATGAAAAAGAGGGAAAGGCA
AAGAAGGTCGTTCAAGCACAAAATCTCTGGTTTGAGATCTTAAAGTCCCAGATAGAAACT
GGGACCCCTTACATGTTGTACAAGGATTCTTGCAATAGAAAAAGCAACCAGCAGAATCTT
GGCACTATCAAGTCTTCTAACTTGTGTACAGAGATTATTGAGTACACTAGTCCAACTGAA
ACTGCTGTTTGCAATCTTGCTTCAATTGCTCTACCTAGATATGTTAGAGAGAAGGGGGTC
CCAGGTGAATCACAGCCATCTAAGCTTGTGGGGAGTAGGGGTTCAAAAAATCGATACTTT
GATTTTGACAAATTGGCAGAGGTCACTGCATTAGTCACTTCTAACCTGAACAAAATTATT
GACGTCAATTACTACCCTGTTGAAACTGCAAAAAGGTCTAACTTACGACATAGGCCTATT
GGACTTGGAGTCCAGGGACTTGCAGACACATTCATTTTGCTTGGCATGGCATTTGATTCC
CAGGAGGCTCAGCAGCTAAACAAGGACATATTTGAGACAATATACTACCATGCATTAAAA
GCTTCTTCTGAATTAGCTGCCAAGGAAGGCCCATACGAGACATATGCAGGAAGTCCTGTA
AGCAAGGGTATTCTCCAGCCAGACATGTGGGGAATTACACCATCTGATAAATGGGATTGG
CATGCTCTTCGTGAAATGATTGCAAATAATGGTGTAAGAAATTCACTTCTTGTAGCTCCA
ATGCCAACTGCTTCAACCAGCCAAATTCTTGGAAATAATGAATGCTTTGAGCCATATACA
TCTAATATCTACAGCAGAAGGGTTCTGAGTGGTGAATTTGTTGTGGTGAACAAACATCTT
CTGCATGACCTAACCGAGACAGGGCTCTGGTCACCTGCTGTTAAGAATAGGATAATACAT
GATGATGGTTCTGTGCAGAAAATCCCTGAAATTCCAGATGATCTTAAAGTTATTTATAAG
ACTGTCTGGGAGATCAAGCAACGGACCCTGGTTGACATGGCTGTAGACCGTGGTTGCTAC
ATAGATCAGAGTCAAAGCCTCAACATCCATATGGATCAACCCAACTTTGGAAAGCTCACT
TCCCTTCATTTTCATGCTTGGTCCAGGGGTTTGAAAACTGGAATGTACTATCTACGATCA
CGTGCTGCAGCTGATGCAATCAAGTTCACAGTTGACACTTCCATGCTGAAGGAAAAACCA
AAGACTGCTGTTGACGAAGAAACTAAATTGGCTCAGATGGTGTGCTCTTTTACAAACCGC
GAGGACTGTTTATCCTGTGGAAGTTAG

Peptide Sequence

PEP ID

Solyc04g051350.3.1
PEP Infomation

Ribonucleoside-diphosphate reductase (AHRD V3.3 *** K4BS95_SOLLC)
Sequence

MYVVKRDGRQETVHFDKITARLKKLSYGLSTDHCDPVLVSQKVCAGVYKGVTTSQLDELA
AETAAAMTANHPDYACLAARIAVSNLHKNTKKSFSETIKDMYYHVSERSGLKAPLVSDEV
YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKIVERPQHMLMRVSVGIHK
EDIESVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLTECAV
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
LEPWHADVFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQSNGIWSLFCPNEAPGLA
DCWGEDFEKLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDSCNRKSNQQNL
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKGVPGESQPSKLVGSRGSKNRYF
DFDKLAEVTALVTSNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMAFDS
QEAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGILQPDMWGITPSDKWDW
HALREMIANNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
LHDLTETGLWSPAVKNRIIHDDGSVQKIPEIPDDLKVIYKTVWEIKQRTLVDMAVDRGCY
IDQSQSLNIHMDQPNFGKLTSLHFHAWSRGLKTGMYYLRSRAAADAIKFTVDTSMLKEKP
KTAVDEETKLAQMVCSFTNREDCLSCGS*

Transcript Sequence

Transcript ID

Solyc04g051350.3.1
Transcript Infomation

Ribonucleoside-diphosphate reductase (AHRD V3.3 *** K4BS95_SOLLC)
Sequence

CACCCCTCACTCTTCCTAATTGGCGGGAATTTTTCGAAAATCCCAAAAATTGAAACCCTA
ATTTGCGCCAAACATATTGAAATTCTTAATTATTCTATATAATCACTTCACTACGAGGCC
AAAAAAGCATATCAACGAAATTCCTCAAAAGAAATTTCGTTGAAAAGATGTATGTGGTGA
AGAGAGATGGGCGTCAGGAAACTGTTCACTTTGATAAGATTACTGCTAGGCTTAAGAAAT
TGAGTTATGGGCTTAGTACGGATCATTGTGATCCAGTTCTTGTTTCTCAGAAGGTTTGTG
CTGGTGTTTACAAGGGTGTAACTACTAGTCAGCTTGATGAATTGGCTGCGGAAACTGCTG
CTGCTATGACTGCTAATCATCCTGATTATGCATGTCTGGCTGCAAGGATTGCTGTGTCCA
ACCTGCACAAGAACACCAAGAAATCATTTTCTGAGACGATTAAGGACATGTACTACCATG
TCAGTGAGAGATCTGGATTGAAGGCACCACTTGTTTCTGATGAAGTTTATGAGATAATCA
TGAAGAATGCTGCTCGTCTGGACAGTGAGATCATATACGACAGAGACTTTGACTATGATT
ACTTTGGTTTCAAAACCCTTGAAAGGTCTTACCTTTTAAAGATTCAGGGAAAGATTGTGG
AAAGGCCACAACATATGCTGATGAGAGTATCTGTTGGAATCCACAAAGAGGATATTGAAT
CTGTCATCAAGACATATCATTTGATGTCTCAACGCTGGTTCACTCATGCATCTCCAACAC
TATTTAATGCTGGCACTCCAAGGCCTCAATTAAGTAGCTGCTTCCTGATATGCATGAAAG
ATGATAGCATTGAGGGCATATATGATACTCTTACGGAATGTGCTGTTATTAGCAAATCAG
CTGGGGGAATTGGCGTATCTGTGCACAACATACGTGCTACTGGGAGTTATATTCGTGGAA
CAAACGGAACATCAAATGGGATTGTTCCTATGCTGCGTGTGTTTAATGATACTGCCAGAT
ATGTTGATCAAGGGGGTGGCAAAAGAAAGGGCGCTTTTGCTGTCTACCTTGAGCCTTGGC
ATGCTGATGTATTTGAATTTCTGGATTTAAGAAAAAACCATGGGAAGGAAGAGAATCGGG
CACGAGATCTTTTCTATGCTCTTTGGGTGCCAGATCTATTTATGCAAAGAGTCCAAAGCA
ATGGGATATGGTCTTTGTTTTGTCCAAATGAGGCTCCTGGATTGGCAGATTGCTGGGGTG
AAGATTTTGAGAAGCTGTACACAAAATATGAAAAAGAGGGAAAGGCAAAGAAGGTCGTTC
AAGCACAAAATCTCTGGTTTGAGATCTTAAAGTCCCAGATAGAAACTGGGACCCCTTACA
TGTTGTACAAGGATTCTTGCAATAGAAAAAGCAACCAGCAGAATCTTGGCACTATCAAGT
CTTCTAACTTGTGTACAGAGATTATTGAGTACACTAGTCCAACTGAAACTGCTGTTTGCA
ATCTTGCTTCAATTGCTCTACCTAGATATGTTAGAGAGAAGGGGGTCCCAGGTGAATCAC
AGCCATCTAAGCTTGTGGGGAGTAGGGGTTCAAAAAATCGATACTTTGATTTTGACAAAT
TGGCAGAGGTCACTGCATTAGTCACTTCTAACCTGAACAAAATTATTGACGTCAATTACT
ACCCTGTTGAAACTGCAAAAAGGTCTAACTTACGACATAGGCCTATTGGACTTGGAGTCC
AGGGACTTGCAGACACATTCATTTTGCTTGGCATGGCATTTGATTCCCAGGAGGCTCAGC
AGCTAAACAAGGACATATTTGAGACAATATACTACCATGCATTAAAAGCTTCTTCTGAAT
TAGCTGCCAAGGAAGGCCCATACGAGACATATGCAGGAAGTCCTGTAAGCAAGGGTATTC
TCCAGCCAGACATGTGGGGAATTACACCATCTGATAAATGGGATTGGCATGCTCTTCGTG
AAATGATTGCAAATAATGGTGTAAGAAATTCACTTCTTGTAGCTCCAATGCCAACTGCTT
CAACCAGCCAAATTCTTGGAAATAATGAATGCTTTGAGCCATATACATCTAATATCTACA
GCAGAAGGGTTCTGAGTGGTGAATTTGTTGTGGTGAACAAACATCTTCTGCATGACCTAA
CCGAGACAGGGCTCTGGTCACCTGCTGTTAAGAATAGGATAATACATGATGATGGTTCTG
TGCAGAAAATCCCTGAAATTCCAGATGATCTTAAAGTTATTTATAAGACTGTCTGGGAGA
TCAAGCAACGGACCCTGGTTGACATGGCTGTAGACCGTGGTTGCTACATAGATCAGAGTC
AAAGCCTCAACATCCATATGGATCAACCCAACTTTGGAAAGCTCACTTCCCTTCATTTTC
ATGCTTGGTCCAGGGGTTTGAAAACTGGAATGTACTATCTACGATCACGTGCTGCAGCTG
ATGCAATCAAGTTCACAGTTGACACTTCCATGCTGAAGGAAAAACCAAAGACTGCTGTTG
ACGAAGAAACTAAATTGGCTCAGATGGTGTGCTCTTTTACAAACCGCGAGGACTGTTTAT
CCTGTGGAAGTTAGTGCTACTATTGCCTACGGGGTAACCTTGTCATAGATAAGCCAAACA
GACCTTAGCTTTGTGGAAGATACACGTACTGATGTTCATTTGATTAGAATTAATTATGTA
TATAATAAATATATATCTGGTTATAGTATAGTATATGTCTTTTTGTATAAACAAGGAACA
ATATGCAACTCTTTTGTATTGGTTAGTGGTGTCGATGTAATCCATTTTTCCTTGAAGCAA
TGAATTTCTCTAACAGCAACTTGAATGTGTGTAAAAATATGAAGTTAATCTAGTCAATAA
TTTATTAGATTAACTAAACGAGTATTCGTTTATGTAT