Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g051200.2.1
CDS Infomation	Alpha-1,4-glucan-protein synthase [UDP-forming], putative (AHRD V3.3 *** B9RFU2_RICCO)
Sequence	ATGTTTCAAGTTAGCGTCAGAGATGATGAGGTAGATATTGTGATAGCTGCAATTGAACCA GATCTTACTTCATTTCTGGAAGAATGGAGAGCAGTATTCTCCCGATTTCACCTGATAATT ATCAAAGATCCTGACATCAAAGGAGAACTTAAAATTCCAGGTGGATTTAATTATGATACC TATACAAAAGCTGATATTCAACAAATTATTGGACCTTCAAATGCTGCAACTTTTTCTGGT TATTCGTGCCGATATTTTGGCTATCTCTTGTCAAAGAAGAAATATATCATCTCAATTGAT GATGACTGCATTCCAGCTAAGGATACTAAGGGTATCCAAGTCGATGCCATAGCACAACAT ATCAATAACCTCTCGACTCCTGCCACCCCATTTTTCTTTAATACCCTCTATGATCCTTTC TGTAAAGGAGCTGATTTTGTTCGTGGCTACCCATTTAGCCTGCGAAATGGTGTCTCGTGT GCTCTATCATGTGGACTGTGGCTTAATTTAGCAGATCTTGATGCACCTACACAAGCCCTC AAGCCGGAGCTGAGAAACACTCGATATGTTGACGCTGTCCTCACTGTACCAGCTAGGGCC ATGATGCCTATGAGCGGAATCAATATAGCGTTTGATCGTGAATTGGTGGGACCTGCTTTG CTGCCATCTTTCAAGTTGGCAAAGGAAGGAAAGTTCAGGTGGGAAACTGTGGAGGATGTA TGGACTGGAATGTGTGTTAAGGTAGTATGTGATCACTTAGGATATGGTGTGAAAACTGGG CTTCCATATGTGTGGAGGAAAGAAAGAGGTAATGCCATAGGGAGTTTGAAGAAAGAGTGG GAGGGGGTGAAGCTGATGGAAGAAGTTGTTCCATTCTTCCAATCAATGAAATTGACTCCG GCAGCAAAAACAGCAGAAGATTGTGTGATTGAGATTGCAGCAGCCGTGAAGGAGCAACTG GGACGAATAGATCCTGTGTTCACCCGTGCAGCTGATTCCATGGTGGAGTGGGTGCAGCTG TGGAAGGCTGTGAAAACCCGAACATAG

Peptide Sequence

PEP ID	Solyc04g051200.2.1
PEP Infomation	Alpha-1,4-glucan-protein synthase [UDP-forming], putative (AHRD V3.3 *** B9RFU2_RICCO)
Sequence	MFQVSVRDDEVDIVIAAIEPDLTSFLEEWRAVFSRFHLIIIKDPDIKGELKIPGGFNYDT YTKADIQQIIGPSNAATFSGYSCRYFGYLLSKKKYIISIDDDCIPAKDTKGIQVDAIAQH INNLSTPATPFFFNTLYDPFCKGADFVRGYPFSLRNGVSCALSCGLWLNLADLDAPTQAL KPELRNTRYVDAVLTVPARAMMPMSGINIAFDRELVGPALLPSFKLAKEGKFRWETVEDV WTGMCVKVVCDHLGYGVKTGLPYVWRKERGNAIGSLKKEWEGVKLMEEVVPFFQSMKLTP AAKTAEDCVIEIAAAVKEQLGRIDPVFTRAADSMVEWVQLWKAVKTRT*

Transcript Sequence

Transcript ID	Solyc04g051200.2.1
Transcript Infomation	Alpha-1,4-glucan-protein synthase [UDP-forming], putative (AHRD V3.3 *** B9RFU2_RICCO)
Sequence	ATGTTTCAAGTTAGCGTCAGAGATGATGAGGTAGATATTGTGATAGCTGCAATTGAACCA GATCTTACTTCATTTCTGGAAGAATGGAGAGCAGTATTCTCCCGATTTCACCTGATAATT ATCAAAGATCCTGACATCAAAGGAGAACTTAAAATTCCAGGTGGATTTAATTATGATACC TATACAAAAGCTGATATTCAACAAATTATTGGACCTTCAAATGCTGCAACTTTTTCTGGT TATTCGTGCCGATATTTTGGCTATCTCTTGTCAAAGAAGAAATATATCATCTCAATTGAT GATGACTGCATTCCAGCTAAGGATACTAAGGGTATCCAAGTCGATGCCATAGCACAACAT ATCAATAACCTCTCGACTCCTGCCACCCCATTTTTCTTTAATACCCTCTATGATCCTTTC TGTAAAGGAGCTGATTTTGTTCGTGGCTACCCATTTAGCCTGCGAAATGGTGTCTCGTGT GCTCTATCATGTGGACTGTGGCTTAATTTAGCAGATCTTGATGCACCTACACAAGCCCTC AAGCCGGAGCTGAGAAACACTCGATATGTTGACGCTGTCCTCACTGTACCAGCTAGGGCC ATGATGCCTATGAGCGGAATCAATATAGCGTTTGATCGTGAATTGGTGGGACCTGCTTTG CTGCCATCTTTCAAGTTGGCAAAGGAAGGAAAGTTCAGGTGGGAAACTGTGGAGGATGTA TGGACTGGAATGTGTGTTAAGGTAGTATGTGATCACTTAGGATATGGTGTGAAAACTGGG CTTCCATATGTGTGGAGGAAAGAAAGAGGTAATGCCATAGGGAGTTTGAAGAAAGAGTGG GAGGGGGTGAAGCTGATGGAAGAAGTTGTTCCATTCTTCCAATCAATGAAATTGACTCCG GCAGCAAAAACAGCAGAAGATTGTGTGATTGAGATTGCAGCAGCCGTGAAGGAGCAACTG GGACGAATAGATCCTGTGTTCACCCGTGCAGCTGATTCCATGGTGGAGTGGGTGCAGCTG TGGAAGGCTGTGAAAACCCGAACATAGTCCAGTCTTGCTTGGAGGGTGAAGTCTCATATT ATTTATTTTCTTCTAGATCCTTACAAAGGCATGTACATTTAATCCATAGACGGTTCTCTT TAAACTGATGCATAATATAGACAAGTTCTTATTTTCAACTGTTACCTAGGGTGACCAAGA CTTGGTAATAATGTCAGTGTGTTTTCTTGATTTGCCTTCTGGCTTTCGAAATGCTTGGTT CGATTTATGATGTAAGACAGACTCAACAGGAAAGGGGAAATAAATGGTGTAATGCTTGCT GCTTTTGTTTCCTTAGTAGAATTGTTGTTATTTCTATTTCACAAATATAAGTTCAAATTG GTTTTGATGGAATGCAGAGAACAGACCACAGATGATATGTGTTTGTCTAATTAGTTGGGG AAAAGAAAAATATAATTCTC