Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g050960.3.1
CDS Infomation	Homeodomain-like (AHRD V3.3 - Q2HV80_MEDTR)
Sequence	ATGATTCGGAAAAAAGTGTTCTTGACTTACAAGCGAAAGAGGCTACCAGGTTCTGATCTT TTTTTGGAAAATGGGACTCATAATACACCTACTGAGTGTATGAAATCAAAAGCTGTGGCC CCTTTGCTGGAGGAAGAGGAGAAGTATGACAACCCTAGCTTCAAGGATGGAAAGAAAGAC TTTGAGGATAATTCTGAAGAAAATCAGTCCTCAAAGGGTTCCAAAGGGCCTCTCTCTGAA GGAGAACCAAGGAATTCACAGAAGAGATTATGTTCTTGCATTATTTCAGGCAGTATATGT GATAGTAAATGCACCCAGAAGTTTTCTCTTTCCCTGTTGACAGGATTGAATTCTTCGAGA GAACAGGATTTGGTCTCCCCAAGTTCTGGTGGTGATGAGAGGGGATGCGATCTTAAGGAT TCTGATTCCTCTGATTTGGTTAAACTGAGTCTGGAAGAAGTTGCCACACCAAAAGACATC TCTCTGATCCCCTCTGTAAATGCAGTTAGTACAAGTAAATTGTCTTCCAGTCTGATTACT TTTCAGCGAAGAGCTAAGCGGGACAAGGATGCAGGCCGGGCATATGCCAAGGGCAATCTT GAAGCTGAAGATGTTGCTTGCTTATCAGTTGAAAATACTGCATGTCTTGTCGCTCCTCAT GACTCTGATAAATCAGTTGCTAAGAGTTGCTCAGTGGATCTTTCAGCAGATTTTAAGCAT CCAGAGACAACCAACGGAGGTGAGAATTATCAATGTGCTTGTGCTGGATCACCTGCACAG ATGAAGATATTGTTAGATGTTAATGAACAGCCTATCTTAGTGAAGGAAGCTCAGCCAATC GATGAAGTAGCTGATCCAAATTCTGGAGTAGGCTTCTCTGGTTTGGACGACGGTGTTGCT TCAGATACTTTCAAGAAGTCATCATTTCATAGCCCTAAGGACCCTTCTTTTGATGGTTTG TCCAGAACTGAAGTGCCAATATCGTCTCCCTTAGAGGTTGCAAGTAACACTGGTTCCCAA GCTTTAGATATATCTATACCTTGTGATAGTGATGACACAATGGACTGCAATAGGTCGGAA CAAGCATCTGATGAACGCCTCATCCCAACAGCACTGGAAGTTCAGCAGAACCCTCCTTGC TTCTTGAATGGAAATAATTCGACGGTTTTACATAGGGTGCCTTCGGACAAAAGTTTGGAA TTACTTGACATCAAGCCCGAGAAGATAACTCCAATTCATGCAGAGTTGCCTGAAGCTGGT TGCTTATCTGAAAAAGCAATGGCTGATAGTGGTGAAAGCAGTTCTTCGAAAAATGATTTA CTGCAGCTTTTGTCGGAAGATAGAACCTACAACTTTTTCCCATTAGCAAGCCTGCAGGAA AATGAGAGTGCTCATGTTAATTCTAAAGAAGGAAAAGCTTCCTCATTAGAAGAGAAGAGA CATTGTGCATTTACTGTAGCAGAATCCTCAGATTTTCTTGGTTTGTCACTGCCAAGTCAA GCTTTAGCTTCGAGATCCTTACAGTTGGCTGACATATGGAATCAACCAAGCGAATCCATT CAAGGAGCAGCTTCTCAGGTTTCTGTTGATGCATCAATACTTCATCGACATCAAATGATC CTGGACAACATTCTTAACAGAGGAAGATCTCAAAACGGAAACAAGAGGAGATTTGCAGAA AAATTAGGGACTCCAAACATGTGGTCAGAAGAGGAGCTAGATTCTCTTTGGATTGGTGTG AGGCGGCATGGAAGAGGTAACTGGGATGTGATGTTGAGGGATCCAAGGCTGCGCTTTTTT TCGTGGAGGACGCCAACAGACTTGGCAGAACAGTGGATGGAGGAACAGTCGAAACTTTTA CATGGAAAATCCATTTCCCCTGTGAGACAGTTACATAAAGCTGATGTTTCATCCCATGGT ATGGATGATGTTAAACTTTCACTTGGGCATGCACATTCCCAGTCAGGAGACAACATCCGG AGCCAAATACCATTTCATTTTCCAGATGTTCAAAATACTTCGCAAAAATTACTTCACCTG GCTACAACAAATGTAGGGACCTTAGATTCTCTCTGTCTCAGGGGAAACCGCAAAAGAGCT AAGTTCAACCAATCCGAGAACTCTGCAGGTTCAGGTGTTGAATGTTCATTCAGTTCTCGA ATTATGAGCAGAGTGTCTGAAGTAGGTAATTTGCCTCACTGGCTCAAGGAAGTGGTTGCA ATCCCACCCAGGCCTCCTGGATTTGCCCCAGATTCTTCATGGTTTATCCATCCATGGATT GGTCCACCGTTTTCTGAACCTAAGCGAGCTCACTGTGAATCAAGGAACAGATTGAGCGAC TTGTACACTACACCAAAAACTGAGCTGAATAATGGTAATGCTGATTGTGCTCATCTCCCT ATAAGAGAAGGGAAGCAACATTGTAAGTCAGAAGCAGATAAAAAAGTTGAGCTGATTGTC ATCAATAGCGACGCCTCATCAGAGGAGACAATATCAGATGATTGTAATGTAAGGCATTAG

Peptide Sequence

PEP ID	Solyc04g050960.3.1
PEP Infomation	Homeodomain-like (AHRD V3.3 - Q2HV80_MEDTR)
Sequence	MIRKKVFLTYKRKRLPGSDLFLENGTHNTPTECMKSKAVAPLLEEEEKYDNPSFKDGKKD FEDNSEENQSSKGSKGPLSEGEPRNSQKRLCSCIISGSICDSKCTQKFSLSLLTGLNSSR EQDLVSPSSGGDERGCDLKDSDSSDLVKLSLEEVATPKDISLIPSVNAVSTSKLSSSLIT FQRRAKRDKDAGRAYAKGNLEAEDVACLSVENTACLVAPHDSDKSVAKSCSVDLSADFKH PETTNGGENYQCACAGSPAQMKILLDVNEQPILVKEAQPIDEVADPNSGVGFSGLDDGVA SDTFKKSSFHSPKDPSFDGLSRTEVPISSPLEVASNTGSQALDISIPCDSDDTMDCNRSE QASDERLIPTALEVQQNPPCFLNGNNSTVLHRVPSDKSLELLDIKPEKITPIHAELPEAG CLSEKAMADSGESSSSKNDLLQLLSEDRTYNFFPLASLQENESAHVNSKEGKASSLEEKR HCAFTVAESSDFLGLSLPSQALASRSLQLADIWNQPSESIQGAASQVSVDASILHRHQMI LDNILNRGRSQNGNKRRFAEKLGTPNMWSEEELDSLWIGVRRHGRGNWDVMLRDPRLRFF SWRTPTDLAEQWMEEQSKLLHGKSISPVRQLHKADVSSHGMDDVKLSLGHAHSQSGDNIR SQIPFHFPDVQNTSQKLLHLATTNVGTLDSLCLRGNRKRAKFNQSENSAGSGVECSFSSR IMSRVSEVGNLPHWLKEVVAIPPRPPGFAPDSSWFIHPWIGPPFSEPKRAHCESRNRLSD LYTTPKTELNNGNADCAHLPIREGKQHCKSEADKKVELIVINSDASSEETISDDCNVRH*

Transcript Sequence

Transcript ID	Solyc04g050960.3.1
Transcript Infomation	Homeodomain-like (AHRD V3.3 - Q2HV80_MEDTR)
Sequence	TCAATTATATTAATTTTGAAAATTTATTTAAATATATACCCATATAATCCATTATTTTAT GAATATTTAATGTGTGAATAACTTTTTAAATTCTTTATTTATTGTGATAAATAAAAAGCT GACCAAGTGAAAGAGTCCAAAAAGAGAACGCATACTCTCTCTCTCCTTCCCTTTAATCGC ACAGTACTCTAGAGACCAGACAAGTGAGTACAACTACACTCTCTCTCAAACTGAGCTTTC TTGTCGGAAAATTTTCACGCTTCCCTTATCGCCGGCGTCTTTCTCCGTTTCCGGCCGCAT ATATTTGGTGTGGCTTTAGATTCAATTCGACGACTTTGCAATTCATGTTGATTTAAGTTT GCTGTGGAAGTTTCAGTACCTCTTTGTATGACCATTCGAAAGCTTAATGATTCGGAAAAA AGTGTTCTTGACTTACAAGCGAAAGAGGCTACCAGGTTCTGATCTTTTTTTGGAAAATGG GACTCATAATACACCTACTGAGTGTATGAAATCAAAAGCTGTGGCCCCTTTGCTGGAGGA AGAGGAGAAGTATGACAACCCTAGCTTCAAGGATGGAAAGAAAGACTTTGAGGATAATTC TGAAGAAAATCAGTCCTCAAAGGGTTCCAAAGGGCCTCTCTCTGAAGGAGAACCAAGGAA TTCACAGAAGAGATTATGTTCTTGCATTATTTCAGGCAGTATATGTGATAGTAAATGCAC CCAGAAGTTTTCTCTTTCCCTGTTGACAGGATTGAATTCTTCGAGAGAACAGGATTTGGT CTCCCCAAGTTCTGGTGGTGATGAGAGGGGATGCGATCTTAAGGATTCTGATTCCTCTGA TTTGGTTAAACTGAGTCTGGAAGAAGTTGCCACACCAAAAGACATCTCTCTGATCCCCTC TGTAAATGCAGTTAGTACAAGTAAATTGTCTTCCAGTCTGATTACTTTTCAGCGAAGAGC TAAGCGGGACAAGGATGCAGGCCGGGCATATGCCAAGGGCAATCTTGAAGCTGAAGATGT TGCTTGCTTATCAGTTGAAAATACTGCATGTCTTGTCGCTCCTCATGACTCTGATAAATC AGTTGCTAAGAGTTGCTCAGTGGATCTTTCAGCAGATTTTAAGCATCCAGAGACAACCAA CGGAGGTGAGAATTATCAATGTGCTTGTGCTGGATCACCTGCACAGATGAAGATATTGTT AGATGTTAATGAACAGCCTATCTTAGTGAAGGAAGCTCAGCCAATCGATGAAGTAGCTGA TCCAAATTCTGGAGTAGGCTTCTCTGGTTTGGACGACGGTGTTGCTTCAGATACTTTCAA GAAGTCATCATTTCATAGCCCTAAGGACCCTTCTTTTGATGGTTTGTCCAGAACTGAAGT GCCAATATCGTCTCCCTTAGAGGTTGCAAGTAACACTGGTTCCCAAGCTTTAGATATATC TATACCTTGTGATAGTGATGACACAATGGACTGCAATAGGTCGGAACAAGCATCTGATGA ACGCCTCATCCCAACAGCACTGGAAGTTCAGCAGAACCCTCCTTGCTTCTTGAATGGAAA TAATTCGACGGTTTTACATAGGGTGCCTTCGGACAAAAGTTTGGAATTACTTGACATCAA GCCCGAGAAGATAACTCCAATTCATGCAGAGTTGCCTGAAGCTGGTTGCTTATCTGAAAA AGCAATGGCTGATAGTGGTGAAAGCAGTTCTTCGAAAAATGATTTACTGCAGCTTTTGTC GGAAGATAGAACCTACAACTTTTTCCCATTAGCAAGCCTGCAGGAAAATGAGAGTGCTCA TGTTAATTCTAAAGAAGGAAAAGCTTCCTCATTAGAAGAGAAGAGACATTGTGCATTTAC TGTAGCAGAATCCTCAGATTTTCTTGGTTTGTCACTGCCAAGTCAAGCTTTAGCTTCGAG ATCCTTACAGTTGGCTGACATATGGAATCAACCAAGCGAATCCATTCAAGGAGCAGCTTC TCAGGTTTCTGTTGATGCATCAATACTTCATCGACATCAAATGATCCTGGACAACATTCT TAACAGAGGAAGATCTCAAAACGGAAACAAGAGGAGATTTGCAGAAAAATTAGGGACTCC AAACATGTGGTCAGAAGAGGAGCTAGATTCTCTTTGGATTGGTGTGAGGCGGCATGGAAG AGGTAACTGGGATGTGATGTTGAGGGATCCAAGGCTGCGCTTTTTTTCGTGGAGGACGCC AACAGACTTGGCAGAACAGTGGATGGAGGAACAGTCGAAACTTTTACATGGAAAATCCAT TTCCCCTGTGAGACAGTTACATAAAGCTGATGTTTCATCCCATGGTATGGATGATGTTAA ACTTTCACTTGGGCATGCACATTCCCAGTCAGGAGACAACATCCGGAGCCAAATACCATT TCATTTTCCAGATGTTCAAAATACTTCGCAAAAATTACTTCACCTGGCTACAACAAATGT AGGGACCTTAGATTCTCTCTGTCTCAGGGGAAACCGCAAAAGAGCTAAGTTCAACCAATC CGAGAACTCTGCAGGTTCAGGTGTTGAATGTTCATTCAGTTCTCGAATTATGAGCAGAGT GTCTGAAGTAGGTAATTTGCCTCACTGGCTCAAGGAAGTGGTTGCAATCCCACCCAGGCC TCCTGGATTTGCCCCAGATTCTTCATGGTTTATCCATCCATGGATTGGTCCACCGTTTTC TGAACCTAAGCGAGCTCACTGTGAATCAAGGAACAGATTGAGCGACTTGTACACTACACC AAAAACTGAGCTGAATAATGGTAATGCTGATTGTGCTCATCTCCCTATAAGAGAAGGGAA GCAACATTGTAAGTCAGAAGCAGATAAAAAAGTTGAGCTGATTGTCATCAATAGCGACGC CTCATCAGAGGAGACAATATCAGATGATTGTAATGTAAGGCATTAGCTTAAGTTGGGATT TCATAGTTCAACAATGGTTAAACTTGTATAAAAGTAGTTTAAGTATCTCAGCTATTTCTC GAGGGTGAGATTAGTTGAATCAGGTAGTTTTTATTTTCCCAAATTCTTATTTTAGCTATT TGCTGGTAAGCTATGTTGTAAACTCACTTTAGGTCCTAATTAGGGATTGGATCAAAGCCA AGCAAATCCAAACTCCTTCATAAACTCAAGGCTGGTAAGCTTTCTACCTATGGAAAATGT GATAAAATCCCAGGCCGATAATCATTATAGTGAGAGTTTGGCATGAAAGAAGACATTTTA TGATATTTGGTTAACTAATGACTAATAATTTTTCTACGAGTGTTAAATGTGGCCCAAATA ATAGTGACCTGTCTAACTTGCGCAGGATTGGATACATAATAATGAAAAAAAATTGTGTAA AAAATGATAGTGATATGGTTGAGATTAGAGAGAGCTAACTGAATCTACACTTCAAACTAA AAGGTAAAGTAGGTGTAATATACGCAGTAAAAAAGTGATTTTATGTAACGTGTCTGCTGT CTTTTTTGACTTCTAGGATCCCTTCTTCCTACAAGATCTTCTCTATAGCCTTTAAATGTG GTTTATGACTCGTGGAAAAGGATGACATGATAAATGACGCAAACCATATGCTTGCGGTGA ATAAATTCTAAAATTTGAAGTTGGTTGATAGATCAAAATCAATTATTTGGGTAAGCAAGC GTAAATTTGATTTTGATGGTTTCATTTATTGGAGCATCAGAAGTCAGT