Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g050920.3.1
CDS Infomation	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (AHRD V3.3 *** A0A1D1Z955_9ARAE)
Sequence	ATGTCTTACATTCCACCACACAAGAGGCACACAAAGGGTTCACCGTCGCCGGAACCAACT CCGGCACCGGAATCAGTGCTACCTGCCTTGAGAAAAAGCCTGAATTTCAAGAGAAAGGAA AACATTCGGCTCGAGATCCGTTATGCTCATGGTGCAGTTAGGAAATGGTTCCCTGTTGGT TTGACTCATTTTTCATCTCTTGTCAACCTTCAACCTCTTTCTATCCATCAAAAATCTAAC GAAAATCCTCTTCGTTTGGTGCTAATGCAAGGTTGCAATGGAGGAACGAATGATGAGCCA TGGCGTTTGGTGGCTAAAAATGTGATGGAAGACTTACTTTTGTCATTTCAACATGTCAAA TCTGTAATGGAGGAATCTAATATGGAAGAAGAATCAAAGCCGAGTCTAGTTGCTCGTTTT GGAAGAATTCTCTTTCATGGGATTTCTGCAAAAAGTCAAGAATCCCTCAATAGTAACCTA TTAAAGGAAACTACCTTGAGGCAAATGAGAAAATCTTTCTATACCAGTGTTCCTCTTTCA TACATGGAATATATACGAAACCTTGCAGTTGAAAAACTTGACTTACAATATGTGGAGGAG AAGGAATTATACTACGTCAAGCTTTCAGACAACATGCGCGCTGATTCAACTGTCACCTGC AAATGTACGGTGGTCAAGGATCAGGAGAAAATTCAGCTCCATAAGATTGAGCTGAACCAA GTACGCAACATGGTTGCAGACATGAGCTGTCCTGGCAAAAGCTTAGACCTGAGGTTGATG TTAAACACCAAGAAAATCATGACGGGTTTATCTGATGAGGAGATCAATGAAATTAAAAGT CTTATCGGTTCAGCTGTGTTGGACTCTGAAGTTAAGGGTGGGCTGAGATGGCCCTTTGGC GAGGATTCTTCAGGGAGTCGATATGCTGTTACCGGTGTCTGGCACACAACTGCAAAATCG TATGGGAATTCGTCAATTAGGCTTAAGCTTAGACATGCAGATCGATATGATTTCAGATCT TCAACTGGTGAGGTTGCACAGGAAGTTAACCTGAAAATGTCTGGGATTTTATCCCAATTG CAGGAGGAAACGATTGACGAAAACCTGGTGCTTAAAATGCTGGAAGACAACTTGAAGTTA ATCTGGGATCACTGTTTGGATGATGGTTCTTCAAGCTGA

Peptide Sequence

PEP ID	Solyc04g050920.3.1
PEP Infomation	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (AHRD V3.3 *** A0A1D1Z955_9ARAE)
Sequence	MSYIPPHKRHTKGSPSPEPTPAPESVLPALRKSLNFKRKENIRLEIRYAHGAVRKWFPVG LTHFSSLVNLQPLSIHQKSNENPLRLVLMQGCNGGTNDEPWRLVAKNVMEDLLLSFQHVK SVMEESNMEEESKPSLVARFGRILFHGISAKSQESLNSNLLKETTLRQMRKSFYTSVPLS YMEYIRNLAVEKLDLQYVEEKELYYVKLSDNMRADSTVTCKCTVVKDQEKIQLHKIELNQ VRNMVADMSCPGKSLDLRLMLNTKKIMTGLSDEEINEIKSLIGSAVLDSEVKGGLRWPFG EDSSGSRYAVTGVWHTTAKSYGNSSIRLKLRHADRYDFRSSTGEVAQEVNLKMSGILSQL QEETIDENLVLKMLEDNLKLIWDHCLDDGSSS*

Transcript Sequence

Transcript ID	Solyc04g050920.3.1
Transcript Infomation	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (AHRD V3.3 *** A0A1D1Z955_9ARAE)
Sequence	GTCAAACTACCTTTGTTGCTGTCTAATAACATTATTAGTAACTTTATTATAAGCCAATCC AAACACTCTTTGAAGAGTAAAGTGTAGTCTACAACTGAACAGTCTCTCTGAGTGTAGTCT ACAACTGAACAGTGTCTCCGAGCCATGTCTTACATTCCACCACACAAGAGGCACACAAAG GGTTCACCGTCGCCGGAACCAACTCCGGCACCGGAATCAGTGCTACCTGCCTTGAGAAAA AGCCTGAATTTCAAGAGAAAGGAAAACATTCGGCTCGAGATCCGTTATGCTCATGGTGCA GTTAGGAAATGGTTCCCTGTTGGTTTGACTCATTTTTCATCTCTTGTCAACCTTCAACCT CTTTCTATCCATCAAAAATCTAACGAAAATCCTCTTCGTTTGGTGCTAATGCAAGGTTGC AATGGAGGAACGAATGATGAGCCATGGCGTTTGGTGGCTAAAAATGTGATGGAAGACTTA CTTTTGTCATTTCAACATGTCAAATCTGTAATGGAGGAATCTAATATGGAAGAAGAATCA AAGCCGAGTCTAGTTGCTCGTTTTGGAAGAATTCTCTTTCATGGGATTTCTGCAAAAAGT CAAGAATCCCTCAATAGTAACCTATTAAAGGAAACTACCTTGAGGCAAATGAGAAAATCT TTCTATACCAGTGTTCCTCTTTCATACATGGAATATATACGAAACCTTGCAGTTGAAAAA CTTGACTTACAATATGTGGAGGAGAAGGAATTATACTACGTCAAGCTTTCAGACAACATG CGCGCTGATTCAACTGTCACCTGCAAATGTACGGTGGTCAAGGATCAGGAGAAAATTCAG CTCCATAAGATTGAGCTGAACCAAGTACGCAACATGGTTGCAGACATGAGCTGTCCTGGC AAAAGCTTAGACCTGAGGTTGATGTTAAACACCAAGAAAATCATGACGGGTTTATCTGAT GAGGAGATCAATGAAATTAAAAGTCTTATCGGTTCAGCTGTGTTGGACTCTGAAGTTAAG GGTGGGCTGAGATGGCCCTTTGGCGAGGATTCTTCAGGGAGTCGATATGCTGTTACCGGT GTCTGGCACACAACTGCAAAATCGTATGGGAATTCGTCAATTAGGCTTAAGCTTAGACAT GCAGATCGATATGATTTCAGATCTTCAACTGGTGAGGTTGCACAGGAAGTTAACCTGAAA ATGTCTGGGATTTTATCCCAATTGCAGGAGGAAACGATTGACGAAAACCTGGTGCTTAAA ATGCTGGAAGACAACTTGAAGTTAATCTGGGATCACTGTTTGGATGATGGTTCTTCAAGC TGATGACCATATTTCGCGGTCCTTCACTCTCTTTGCAAAATATCTGCAGAAACTCACAAG CTATGGTCGTTTGGTGAAGAAAGTTACCTTTTGTAGTTTGCAGTGGTGGAATGTATAGAT GGATAACTGAATTGTTAAACTCAAAATGTTGAATGCTGTTTGCAGTATATTGTTTTGCGT ATGGAATGAAATGAACCAAGGCCTCTGATGGTAGCGGCATCAGTAAAGGAATAGTTTTGT TTTTGTAATGGATCGAACTTCTTAGTTAAACGTAGTGTTGAGTTCACATATTTGATTTTA CTGAATGTGGGGATCGAAATATAAATAGCTTATTGATGCATAGAGGAAAATCCTACAATG TCTGCAGTTAAAACACCAGAAAAGGATTTTAAAGGAGAAGATATATTATTTGGAGCATTA CATGATATATAAGCAATCTATTCCAGACAAAAAGATAAAAAGTAAATTAAATACAATCTA TACATTCTGTATGTGGATGGTTTCTAATATAACTCTCATAACAATATTTACCTTAATTTC CTTATTGGTAATGCATTTCCAAAGAGTTTTTCTACTTCAGTTGCTTCCATTTTAAGTCCA TCCAAAATATCCATTTCTTCTTTGCTGAGCTCTCTTATAAAGTTTTCTTCATCTTGTTGC AGCTCTTTGAAACCTTCGAACAGTCTACTGAATAAGCTGACTTCTTTTTCCTTCACCTTC TCG