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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g049660.2.1
CDS Infomation

DVA-1 polyprotein (AHRD V3.3 *** A0A0B0N1N3_GOSAR)
Sequence

ATGCAGTCAAACAGCAAAGATCTGCTTCACTTGGAGACTGAAGGCTTGTCCTTGGAATCA
AAACTTCTCTTTTGCACTAGTGATGGCGGATCTCAATCTCTAAATTTGAAACCTGACGAC
CTTCCTGATAACAAGCCTAACAAGCCTGAAATCTCTTCTGTACCGAGAAGCCAAGTTCTA
ACAAAGGTCAAGGATTTTTTGGGAGTATTTTTGGAAAACAATAGAAAAGTGGAGCTTGAA
GCAAAGAAGAATCCTGAGAAATATGATATCGAAGCTCTTACCGGTGAAGAATCTGAATAC
ATAGAGATGGACTTAATGTTGGGTGTTGCTGAACTTCACACACAGGAGGCTGTATCAGCT
GCTGAATCTGCAATAGCAAGTTACCAACCAGTAATCGATCTGGATACCAATGATACGACA
GAATCTGAAGACACTAGCGATGAGGATGACATTGAGGATACCAACAAAAGTGATGATGAT
GATGATGATGATGATGATGGAGGTTCTTCTCTAGGAAAAGAATCTAACGATTTTGGTGAG
AAATTCAGAACATAG

Peptide Sequence

PEP ID

Solyc04g049660.2.1
PEP Infomation

DVA-1 polyprotein (AHRD V3.3 *** A0A0B0N1N3_GOSAR)
Sequence

MQSNSKDLLHLETEGLSLESKLLFCTSDGGSQSLNLKPDDLPDNKPNKPEISSVPRSQVL
TKVKDFLGVFLENNRKVELEAKKNPEKYDIEALTGEESEYIEMDLMLGVAELHTQEAVSA
AESAIASYQPVIDLDTNDTTESEDTSDEDDIEDTNKSDDDDDDDDDGGSSLGKESNDFGE
KFRT*

Transcript Sequence

Transcript ID

Solyc04g049660.2.1
Transcript Infomation

DVA-1 polyprotein (AHRD V3.3 *** A0A0B0N1N3_GOSAR)
Sequence

TATAAGAAAGGCCTAATAATTTTTTCCATTAAATGGAATAAAATTTCCTCAACGGAACAA
ATAACCAAACGATCCGTTAGACTTTAGACTAGGGTTCCAAAAATAACACTCATTTTTCAA
ATATCTTGCTGAGTCTTTCCCGGCTGCCGCTCTGCCGCCGCCAGCTGCCGCTTGTTCATT
ATAGCATATAGGAGATCATCAGTTGCTTGCCCTTGGTTCTGATATGCAGTCAAACAGCAA
AGATCTGCTTCACTTGGAGACTGAAGGCTTGTCCTTGGAATCAAAACTTCTCTTTTGCAC
TAGTGATGGCGGATCTCAATCTCTAAATTTGAAACCTGACGACCTTCCTGATAACAAGCC
TAACAAGCCTGAAATCTCTTCTGTACCGAGAAGCCAAGTTCTAACAAAGGTCAAGGATTT
TTTGGGAGTATTTTTGGAAAACAATAGAAAAGTGGAGCTTGAAGCAAAGAAGAATCCTGA
GAAATATGATATCGAAGCTCTTACCGGTGAAGAATCTGAATACATAGAGATGGACTTAAT
GTTGGGTGTTGCTGAACTTCACACACAGGAGGCTGTATCAGCTGCTGAATCTGCAATAGC
AAGTTACCAACCAGTAATCGATCTGGATACCAATGATACGACAGAATCTGAAGACACTAG
CGATGAGGATGACATTGAGGATACCAACAAAAGTGATGATGATGATGATGATGATGATGA
TGGAGGTTCTTCTCTAGGAAAAGAATCTAACGATTTTGGTGAGAAATTCAGAACATAGTT
ATAAGCGTGCTTCTCTTCCATGTTCCTATAAAACTTGT