Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g049450.3.1
CDS Infomation

Protein disulfide-isomerase (AHRD V3.3 *** K4BRS2_SOLLC)
Sequence

ATGGCGATGAAGAAATATCTAATTCTCTCCATTTTTCTACTCAATCTCATCTTCTTCAGA
ACTGCTTTCTCTTCTGTTGTTGAAGAAGAAGAGGATCTCAGTTTCCTTGAAGAAGAGGAT
TCCGATGCTCATTCAGATTCCAATCCATATGGTGACCACCACGATTTTGAGAACTACGAA
GATCTCGAGGACGATTCTTCCGATCACGGAGAAGACTCGTATGAGCCGCCAGCAGTGGAT
GAGAAGGATGTGGCTGTATTGAAGGAAGGGAATTTTAGTGAATTTATTTCGAAGAATAAG
TATGTTATGGTTGAGTTCTATGCGCCGTGGTGTGGTCATTGTCAGGCACTTGCACCGGAG
TATGCTGCAGCCGCGACTGAGCTGAAAGGAGAGAATGTGATGCTTGCTAAAGTAGATGCT
ACTGAGGAAGCTGAACTTGCTCAAAAGTATGATGTGCAAGGGTATCCCACTGTTTTCTTC
CTCATTGATGGTGTTCACAAGACCTATAATGGTGAAAGGAATAAGGATGCTATTATTTCA
TGGATAAAAAAGAAGACCGGGCCTGTTCTATCCAATATAACGACTGTAGAGGAGGCAGAA
CAAATCTTGAAAGATGAGAAAAAAGTAGTGTTGGGTTATTTGAATGATTTGGTGGGTGAT
AAAAGTGAAGAGCTTGCTGCAGCTGCTGCACTAGAAGATGATGTCAACTTCTATCAGACT
GCCAATCCAGATGTGGCAAAACTCTTCCATATTGATTCTCAAGCCCAACGTCCAGCTCTT
GTCATAATTAAGAAAGAAGCCGAGAATATCAACCACTTTGATGGTGAATTCACCAAGTCA
GCAATAGCTAAGTTTGTTTTTGAGAACAAGCTTCCTCTTGTCACCAATTTTACTCGGGAA
AGTGCCTCAGAGATATTTGAAAATCCCATTACGAAGCAGTTGATACTTTTTGCCACTTCG
AAAGATTCAGAAAAATTCTTACCAATATTTCAAGAAGCTGTGAAAGCTTTTAAAGGAAAG
CTTATCTGTGTGTTTGTTGAAATCGACAACGAAGATGTTGGAAAACCAGTTTCAGAGTAC
TTTGGTGTTAGCGGTGATGCCCCAAGAGTTCTCGCATATACAGGAAATGAGGATGGGAGG
AAGTTTATACTGGAAGGTGAAATAACCTTGGATGGTGTCAAGTCATTTGGGGAGAAGTTT
TTGGAAGACAATTTAAAGCCTTTCTACAAATCTGATCCAATTCCTGAGACTAATGATGGG
GATGTCAAAATTGTGGTTGGCAATAACTTTGACGAAATTGTTTTGGATGAATCAAAAGAT
GTTCTTCTTGAGTTATATGCTCCTTGGTGTGGACATTGTCAATCACTAGAACCCATATAC
AACAAGCTTGGCAAGCATTTAAGAGGCATTGACTCCCTTGTTATTGCCAAGATGGATGGT
ACAACAAACGAGCATCCCAGAGCCAAGTCTGATGGATTCCCAACACTTCTGTTCTTCCCA
GCTGGCAACAAGAGCTTTGAACCTATTACTGTTGACACAGATCGTACAGTTGTTGCCTTT
TACAAATTCCTGAAAAAGCATGCATCTACCCCGTTCAAGATTCAAAAGCCAGTCTCAACA
CAGAGAACTACAGAGTCTGATGCCAGTTTAAGCCACGAGAGCACCACTAATGACGCTAAG
GATGAACTGTGA

Peptide Sequence

PEP ID

Solyc04g049450.3.1
PEP Infomation

Protein disulfide-isomerase (AHRD V3.3 *** K4BRS2_SOLLC)
Sequence

MAMKKYLILSIFLLNLIFFRTAFSSVVEEEEDLSFLEEEDSDAHSDSNPYGDHHDFENYE
DLEDDSSDHGEDSYEPPAVDEKDVAVLKEGNFSEFISKNKYVMVEFYAPWCGHCQALAPE
YAAAATELKGENVMLAKVDATEEAELAQKYDVQGYPTVFFLIDGVHKTYNGERNKDAIIS
WIKKKTGPVLSNITTVEEAEQILKDEKKVVLGYLNDLVGDKSEELAAAAALEDDVNFYQT
ANPDVAKLFHIDSQAQRPALVIIKKEAENINHFDGEFTKSAIAKFVFENKLPLVTNFTRE
SASEIFENPITKQLILFATSKDSEKFLPIFQEAVKAFKGKLICVFVEIDNEDVGKPVSEY
FGVSGDAPRVLAYTGNEDGRKFILEGEITLDGVKSFGEKFLEDNLKPFYKSDPIPETNDG
DVKIVVGNNFDEIVLDESKDVLLELYAPWCGHCQSLEPIYNKLGKHLRGIDSLVIAKMDG
TTNEHPRAKSDGFPTLLFFPAGNKSFEPITVDTDRTVVAFYKFLKKHASTPFKIQKPVST
QRTTESDASLSHESTTNDAKDEL*

Transcript Sequence

Transcript ID

Solyc04g049450.3.1
Transcript Infomation

Protein disulfide-isomerase (AHRD V3.3 *** K4BRS2_SOLLC)
Sequence

AGTGTGAAAACTTTGGTGCTTCAGTTTCAACTTGCTTCAGCAATGGCGATGAAGAAATAT
CTAATTCTCTCCATTTTTCTACTCAATCTCATCTTCTTCAGAACTGCTTTCTCTTCTGTT
GTTGAAGAAGAAGAGGATCTCAGTTTCCTTGAAGAAGAGGATTCCGATGCTCATTCAGAT
TCCAATCCATATGGTGACCACCACGATTTTGAGAACTACGAAGATCTCGAGGACGATTCT
TCCGATCACGGAGAAGACTCGTATGAGCCGCCAGCAGTGGATGAGAAGGATGTGGCTGTA
TTGAAGGAAGGGAATTTTAGTGAATTTATTTCGAAGAATAAGTATGTTATGGTTGAGTTC
TATGCGCCGTGGTGTGGTCATTGTCAGGCACTTGCACCGGAGTATGCTGCAGCCGCGACT
GAGCTGAAAGGAGAGAATGTGATGCTTGCTAAAGTAGATGCTACTGAGGAAGCTGAACTT
GCTCAAAAGTATGATGTGCAAGGGTATCCCACTGTTTTCTTCCTCATTGATGGTGTTCAC
AAGACCTATAATGGTGAAAGGAATAAGGATGCTATTATTTCATGGATAAAAAAGAAGACC
GGGCCTGTTCTATCCAATATAACGACTGTAGAGGAGGCAGAACAAATCTTGAAAGATGAG
AAAAAAGTAGTGTTGGGTTATTTGAATGATTTGGTGGGTGATAAAAGTGAAGAGCTTGCT
GCAGCTGCTGCACTAGAAGATGATGTCAACTTCTATCAGACTGCCAATCCAGATGTGGCA
AAACTCTTCCATATTGATTCTCAAGCCCAACGTCCAGCTCTTGTCATAATTAAGAAAGAA
GCCGAGAATATCAACCACTTTGATGGTGAATTCACCAAGTCAGCAATAGCTAAGTTTGTT
TTTGAGAACAAGCTTCCTCTTGTCACCAATTTTACTCGGGAAAGTGCCTCAGAGATATTT
GAAAATCCCATTACGAAGCAGTTGATACTTTTTGCCACTTCGAAAGATTCAGAAAAATTC
TTACCAATATTTCAAGAAGCTGTGAAAGCTTTTAAAGGAAAGCTTATCTGTGTGTTTGTT
GAAATCGACAACGAAGATGTTGGAAAACCAGTTTCAGAGTACTTTGGTGTTAGCGGTGAT
GCCCCAAGAGTTCTCGCATATACAGGAAATGAGGATGGGAGGAAGTTTATACTGGAAGGT
GAAATAACCTTGGATGGTGTCAAGTCATTTGGGGAGAAGTTTTTGGAAGACAATTTAAAG
CCTTTCTACAAATCTGATCCAATTCCTGAGACTAATGATGGGGATGTCAAAATTGTGGTT
GGCAATAACTTTGACGAAATTGTTTTGGATGAATCAAAAGATGTTCTTCTTGAGTTATAT
GCTCCTTGGTGTGGACATTGTCAATCACTAGAACCCATATACAACAAGCTTGGCAAGCAT
TTAAGAGGCATTGACTCCCTTGTTATTGCCAAGATGGATGGTACAACAAACGAGCATCCC
AGAGCCAAGTCTGATGGATTCCCAACACTTCTGTTCTTCCCAGCTGGCAACAAGAGCTTT
GAACCTATTACTGTTGACACAGATCGTACAGTTGTTGCCTTTTACAAATTCCTGAAAAAG
CATGCATCTACCCCGTTCAAGATTCAAAAGCCAGTCTCAACACAGAGAACTACAGAGTCT
GATGCCAGTTTAAGCCACGAGAGCACCACTAATGACGCTAAGGATGAACTGTGAGATATG
TAGGTTCTAGCATATAAGTCAAGTTTGGCTTTAGAAGAGAATGCAAAGCATATGGTTAAA
TGTGGAAGTGGAATATGATCACAACATCAGCATTGAAAATTTAGGTAGAGAATAGAAAGT
AGAAAGACACACCAAAAGGCTCTCTTTTGATGGTTGAATATTTTTACTTCTTTTTCTTTT
TTGGTTGGCTGAAAATAAAATGTTTCGTTGAATTTGCAAATTGACATGCCTTTTTCTTTA
CTTTGTTTTTGTTGTGGTATTTATGGAAGCAAGTTTTGCACTAGTTTGGATT