Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g049350.3.1
CDS Infomation	chorismate synthase 1 precursor
Sequence	ATGGTAGAACCTCTTTCCCAGTTGATTGACCTTTACTTGGTGGATTCAACTGAATTGTGC CAGAAACAAGAAATGAAAAGAAAAGAGATACAGGCTGCTGGTAGTACATTTGGAAATTAC TTCCGCGTTACAACTTTTGGAGAATCTCATGGTGGTGGAGTTGGTTGTATTATTGATGGA TGTCCTCCCCGTCTCCCACTTTCTGAATCTGATATGCAGGTGGAACTTGACAGGAGGAGG CCAGGTCAAAGCCGCATTACCACACCTAGGAAAGAGACTGACACTTGCAAAATTTCATCA GGCACTGCAGATGGGCTGACTACTGGATCTCCAATCAAGGTTGAAGTACCTAACACTGAT CAGAGAGGAAATGACTACAGTGAAATGTCGCTTGCTTACAGGCCATCTCATGCAGATGCC ACTTATGACTTCAAGTATGGAGTGAGATCTGTACAGGGGGGTGGTAGATCATCAGCAAGA GAGACTATTGGGAGAGTTGCTGCTGGAGCAGTTGCTAAGAAAATTCTCAAACTCTATTCT GGAGCTGAGGTTCTTGCTTATGTTTCTCAAGTTCACCAAGTTGTACTTCCTGAGGATTTG ATTGATCATCAGAACGTGACTTTAGAGCAGATAGAAAGCAATATTGTCCGATGCCCGGAT CCGGAATATGCAGAGAAGATGATTGCTGCTATTGATGCTGTACGAGTGAGAGGAGACTCT GTTGGTGGTGTTGTAACTTGCATTGTTAGAAATCTCCCACGGGGTCTTGGTACACCAGTC TTCGATAAACTTGAAGCTGAGCTAGCCAAAGCTTGCATGTCATTACCTGCGACAAAGGGT TTTGAGTTTGGCAGTGGCTTTGCAGGCACGTTCATGACTGGTAGCGAGCATAATGATGAA TTCTATATGGATGAGCATGGCCGAATCAGGACAAGAACCAACAGATCTGGTGGAATCCAG GGCGGTATATCAAATGGAGAAGTTATCAATATGAGAATAGGTTTCAAGCCAACTTCAACT ATTTCTAGGAAGCAGCAAACTGTGACAAGAGACAAACACGAAACAGAACTCATCGCTAGG GGTCGCCATGATCCTTGTGTGGTTCCCCGAGCTGTTCCAATGGTTGAAGCAATGGTCGCC TTGGTGCTTGTTGATCAGTTAATGGCTCAGTATTCACAGTGTATGATGTTCCCAATCAAT CCTGAACTACAGGAACCTTTGCAGTCATCACCTGAATCAGCTGAGGTTACCCTCTGA

Peptide Sequence

PEP ID	Solyc04g049350.3.1
PEP Infomation	chorismate synthase 1 precursor
Sequence	MVEPLSQLIDLYLVDSTELCQKQEMKRKEIQAAGSTFGNYFRVTTFGESHGGGVGCIIDG CPPRLPLSESDMQVELDRRRPGQSRITTPRKETDTCKISSGTADGLTTGSPIKVEVPNTD QRGNDYSEMSLAYRPSHADATYDFKYGVRSVQGGGRSSARETIGRVAAGAVAKKILKLYS GAEVLAYVSQVHQVVLPEDLIDHQNVTLEQIESNIVRCPDPEYAEKMIAAIDAVRVRGDS VGGVVTCIVRNLPRGLGTPVFDKLEAELAKACMSLPATKGFEFGSGFAGTFMTGSEHNDE FYMDEHGRIRTRTNRSGGIQGGISNGEVINMRIGFKPTSTISRKQQTVTRDKHETELIAR GRHDPCVVPRAVPMVEAMVALVLVDQLMAQYSQCMMFPINPELQEPLQSSPESAEVTL*

Transcript Sequence

Transcript ID	Solyc04g049350.3.1
Transcript Infomation	chorismate synthase 1 precursor
Sequence	ATGGTAGAACCTCTTTCCCAGTTGATTGACCTTTACTTGGTGGATTCAACTGAATTGTGC CAGAAACAAGAAATGAAAAGAAAAGAGATACAGGCTGCTGGTAGTACATTTGGAAATTAC TTCCGCGTTACAACTTTTGGAGAATCTCATGGTGGTGGAGTTGGTTGTATTATTGATGGA TGTCCTCCCCGTCTCCCACTTTCTGAATCTGATATGCAGGTGGAACTTGACAGGAGGAGG CCAGGTCAAAGCCGCATTACCACACCTAGGAAAGAGACTGACACTTGCAAAATTTCATCA GGCACTGCAGATGGGCTGACTACTGGATCTCCAATCAAGGTTGAAGTACCTAACACTGAT CAGAGAGGAAATGACTACAGTGAAATGTCGCTTGCTTACAGGCCATCTCATGCAGATGCC ACTTATGACTTCAAGTATGGAGTGAGATCTGTACAGGGGGGTGGTAGATCATCAGCAAGA GAGACTATTGGGAGAGTTGCTGCTGGAGCAGTTGCTAAGAAAATTCTCAAACTCTATTCT GGAGCTGAGGTTCTTGCTTATGTTTCTCAAGTTCACCAAGTTGTACTTCCTGAGGATTTG ATTGATCATCAGAACGTGACTTTAGAGCAGATAGAAAGCAATATTGTCCGATGCCCGGAT CCGGAATATGCAGAGAAGATGATTGCTGCTATTGATGCTGTACGAGTGAGAGGAGACTCT GTTGGTGGTGTTGTAACTTGCATTGTTAGAAATCTCCCACGGGGTCTTGGTACACCAGTC TTCGATAAACTTGAAGCTGAGCTAGCCAAAGCTTGCATGTCATTACCTGCGACAAAGGGT TTTGAGTTTGGCAGTGGCTTTGCAGGCACGTTCATGACTGGTAGCGAGCATAATGATGAA TTCTATATGGATGAGCATGGCCGAATCAGGACAAGAACCAACAGATCTGGTGGAATCCAG GGCGGTATATCAAATGGAGAAGTTATCAATATGAGAATAGGTTTCAAGCCAACTTCAACT ATTTCTAGGAAGCAGCAAACTGTGACAAGAGACAAACACGAAACAGAACTCATCGCTAGG GGTCGCCATGATCCTTGTGTGGTTCCCCGAGCTGTTCCAATGGTTGAAGCAATGGTCGCC TTGGTGCTTGTTGATCAGTTAATGGCTCAGTATTCACAGTGTATGATGTTCCCAATCAAT CCTGAACTACAGGAACCTTTGCAGTCATCACCTGAATCAGCTGAGGTTACCCTCTGAACG GAGCAAACAGACATAAACCGTCAAATAACTTCTGGATAAATTGAGAAATTTTTAGTTCTT CCTGAATAGTGTACTACTTGTGGTTTTTCTTTTTTATAGATATCTCCTGTTTGCCTCTTT ATAGAGTTACAGCAATGTATAAGTTTTGTGTGATGGACTAGGCAATCTTAAGTTCTTGTT CCACATAAAACCTCATGTTGTACCTTTGTTCCTTCCCAGCCTGCTTATCTTCCGCTCGGA GTTAAGAATTTGTCATTACTTGAGTCCAGGTAAAATTGTTATGGTGATATGTATGAATAT GCTAATTCATTTTGTTTAAAATTTAATGAAATAAATTTATTATGTTGCCAATTGTTTATT TGAACTTCAGGCCATATGTAAACCTCAACCGAGTATTAATGATATTCAATATAAAATAAA AGAAATAATTTTTGATACTCAACAAAAATCCAGTGTGATATTTGAA