Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g049160.3.1
CDS Infomation

Calcium dependent protein kinase (AHRD V3.3 *** Q93XI9_SOLTU)
Sequence

ATGGCTTCAGAGACTGATAGAAAAGCAGCAACAGAGTCTACTAAGACAAGCACAGTTCCA
CCATTGAAGCCCACATGGGTTCTCCCATACAGAACTGAAAGACTTCAGCAGCTTTACAGT
ATAGGAAAAAAATTAGGGCAAGGCCAATTTGGTACCACCCATTTATGTACAGAAAAATCA
ACTACTACTCTTTATGCTTGCAAGACTATACCAAAGAAGAAGTTGATTTGTAAGGAGGAT
TATGAGGATGTTTGGAGGGAGATTCAGATAATGCACCATTTATCTGAGCACCCAAATGTT
GTCAGGATAAAGGGTACTTATGAGGATACCCTATATGTGCACATAGTTATGGAGCTTTGT
GCTGGTGGAGAGCTTTTTGATAGGATCGTTGAGAAGGGGCATTACAGTGAAAGGGAAGCT
GCGAAGCTTATTAAAACTATTGTTGGAGTGGTTGAAGGTTGTCATTCGCTAGGGGTCATG
CATAGAGACCTCAAACCTGAGAATTTCTTGTTTCTCAGTTCAGATGAAGATGCTGCTCTC
AAGGCCACTGATTTTGGTCTCTCTGTTTTTTACAAGCCAGGTGAAATGTTTTCCGATGTG
GTTGGAAGTCCTTACTATGTTGCACCTGAGGTTTTACGCAAGCATTATGGACCTGAATCT
GATGTATGGAGCGCAGGAGTTATTTTGTACATATTACTTAGTGGTGTTCCACCTTTTTGG
GCAGAAACTGAGATGGGAATATTCCGCCAGATATTGCAAGCAAAATTAGACTTTGAATCT
GAACCATGGCCTGGAATTTCAGATAGTGCCAAGGATTTGATACGTAAAATGCTTGACAGG
AATCCAAAGAGGAGGTTAACTGCCCATGAAGTTTTGTGCCATCCATGGATTGTGGATGAC
ACAATAGCCCCTGATAAACCTCTCGACTCTGCAGTTCTTTCACGCCTCAAGCAATTTTCT
GCAATGAACAAACTTAAGAAGATGGCTCTGCGAGTGATTGCGGAGAGGCTATCAGAAGAA
GAAATTGGTGGTCTCAAGGAGCTATTCAAAATGATAGATACAGACAATAGTGGAACAATC
AGCTTTGATGAACTAAAAGAGGGTTTAAGACGAGTAGGTTCTGAACTAATGGAGTCTGAG
ATCAAGGATCTTATGGATGCAGCAGACATTGACAACAGTGGAACAATAGACTATGGGGAG
TTTCTTGCTGCTACTGTGCACTTAAACAAGTTTGAAAGAGAAGAGAATCTTGTATCAGCG
TTCTCTTTCTTCGACAAAGATGGCAGTGGATACATAACTATTGATGAGCTTCAGCATGCT
TGCAAAGAATTTGGTCTAAGTGAGCTTAATCTCGATGAAATGATCAAAGATATTGATCAA
GATAATGATGGACAAATAGATTATGGGGAATTTGCGGCAATGATGAGGAAGGGCAATAGT
GGAGGTGTTGGAAGGAGGACCATGAGAAACACTTTGAATTTGGGAGAAGCCCTTGGACTT
GTAGAGAGTAAAGAAGAAGATGTATGA

Peptide Sequence

PEP ID

Solyc04g049160.3.1
PEP Infomation

Calcium dependent protein kinase (AHRD V3.3 *** Q93XI9_SOLTU)
Sequence

MASETDRKAATESTKTSTVPPLKPTWVLPYRTERLQQLYSIGKKLGQGQFGTTHLCTEKS
TTTLYACKTIPKKKLICKEDYEDVWREIQIMHHLSEHPNVVRIKGTYEDTLYVHIVMELC
AGGELFDRIVEKGHYSEREAAKLIKTIVGVVEGCHSLGVMHRDLKPENFLFLSSDEDAAL
KATDFGLSVFYKPGEMFSDVVGSPYYVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFW
AETEMGIFRQILQAKLDFESEPWPGISDSAKDLIRKMLDRNPKRRLTAHEVLCHPWIVDD
TIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTI
SFDELKEGLRRVGSELMESEIKDLMDAADIDNSGTIDYGEFLAATVHLNKFEREENLVSA
FSFFDKDGSGYITIDELQHACKEFGLSELNLDEMIKDIDQDNDGQIDYGEFAAMMRKGNS
GGVGRRTMRNTLNLGEALGLVESKEEDV*

Transcript Sequence

Transcript ID

Solyc04g049160.3.1
Transcript Infomation

Calcium dependent protein kinase (AHRD V3.3 *** Q93XI9_SOLTU)
Sequence

GAGTTGAAAGAAAAGTTTTAGGATATATTTGACTGCTTTTCCCATAAAAGAAAGTGCAAT
GAATCTAGAGTGAGAAAGTATAGTGCAAAGATTTAGGAATATCCTCGATCAACAGAGAGA
GAGAGAAAAGGATTGAAGAAATTTGGAGGAGAATTGACCTTCGATTGTGAAGAATCAATG
GCTTCAGAGACTGATAGAAAAGCAGCAACAGAGTCTACTAAGACAAGCACAGTTCCACCA
TTGAAGCCCACATGGGTTCTCCCATACAGAACTGAAAGACTTCAGCAGCTTTACAGTATA
GGAAAAAAATTAGGGCAAGGCCAATTTGGTACCACCCATTTATGTACAGAAAAATCAACT
ACTACTCTTTATGCTTGCAAGACTATACCAAAGAAGAAGTTGATTTGTAAGGAGGATTAT
GAGGATGTTTGGAGGGAGATTCAGATAATGCACCATTTATCTGAGCACCCAAATGTTGTC
AGGATAAAGGGTACTTATGAGGATACCCTATATGTGCACATAGTTATGGAGCTTTGTGCT
GGTGGAGAGCTTTTTGATAGGATCGTTGAGAAGGGGCATTACAGTGAAAGGGAAGCTGCG
AAGCTTATTAAAACTATTGTTGGAGTGGTTGAAGGTTGTCATTCGCTAGGGGTCATGCAT
AGAGACCTCAAACCTGAGAATTTCTTGTTTCTCAGTTCAGATGAAGATGCTGCTCTCAAG
GCCACTGATTTTGGTCTCTCTGTTTTTTACAAGCCAGGTGAAATGTTTTCCGATGTGGTT
GGAAGTCCTTACTATGTTGCACCTGAGGTTTTACGCAAGCATTATGGACCTGAATCTGAT
GTATGGAGCGCAGGAGTTATTTTGTACATATTACTTAGTGGTGTTCCACCTTTTTGGGCA
GAAACTGAGATGGGAATATTCCGCCAGATATTGCAAGCAAAATTAGACTTTGAATCTGAA
CCATGGCCTGGAATTTCAGATAGTGCCAAGGATTTGATACGTAAAATGCTTGACAGGAAT
CCAAAGAGGAGGTTAACTGCCCATGAAGTTTTGTGCCATCCATGGATTGTGGATGACACA
ATAGCCCCTGATAAACCTCTCGACTCTGCAGTTCTTTCACGCCTCAAGCAATTTTCTGCA
ATGAACAAACTTAAGAAGATGGCTCTGCGAGTGATTGCGGAGAGGCTATCAGAAGAAGAA
ATTGGTGGTCTCAAGGAGCTATTCAAAATGATAGATACAGACAATAGTGGAACAATCAGC
TTTGATGAACTAAAAGAGGGTTTAAGACGAGTAGGTTCTGAACTAATGGAGTCTGAGATC
AAGGATCTTATGGATGCAGCAGACATTGACAACAGTGGAACAATAGACTATGGGGAGTTT
CTTGCTGCTACTGTGCACTTAAACAAGTTTGAAAGAGAAGAGAATCTTGTATCAGCGTTC
TCTTTCTTCGACAAAGATGGCAGTGGATACATAACTATTGATGAGCTTCAGCATGCTTGC
AAAGAATTTGGTCTAAGTGAGCTTAATCTCGATGAAATGATCAAAGATATTGATCAAGAT
AATGATGGACAAATAGATTATGGGGAATTTGCGGCAATGATGAGGAAGGGCAATAGTGGA
GGTGTTGGAAGGAGGACCATGAGAAACACTTTGAATTTGGGAGAAGCCCTTGGACTTGTA
GAGAGTAAAGAAGAAGATGTATGACCCATCACTAATCAAAATGTACTCTGCATCAAACTT
TCTATACTAGTTGCTTTATGACATGTAGCTCCCTCCAGCATATAATATCACCATTACGAG
ATTTAGATTGCTTTGTCTCACCTTCATCTCTTCCCATGTTCTATTGATGTCTGCCTTTTT
GCCATATCACATTTGATTGGGGGTAGGGGTGTTTCTGCTTAACCCACCTTCGAATTTGTC
CTTGTAGGTATACCTATACCTTCTGAATACTTCCAAATTAAATGGAAACTTCTTCTCCCC
CACCCCGCCCCTCCTTTCTTTTTTTTGGGGGTGGGGGTGGGGGGATGTACACCTATTACT
CATATAGGAATCTATAAATACTTTTTCTTATTTACCGAATACAACAAAGGTTTGCAAAAC
ATAGAAGACTTGAGAAAAAGGTGCATGGGTTCTCATTTCTTCCCATTACAAATTCTCCAT
TCGACGCTCCGTGCATTTCGCAGAGATGGATTTATGCCCATTAGATTTAAGACAATTAGT
GGTTGTTTGGTTGGGAGTATTAGGACAAATATGT