Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g049140.3.1
CDS Infomation	Transcription factor jumonji (JmjC) domain protein (AHRD V3.3 *** A0A072VKD6_MEDTR)
Sequence	ATGGAGGAAACTATTGAGAACAAGGTAAAGTTTGATTCTTTGGAGGAAACGGAGGATGAT ATTCAGGTAAAGTTTGAAACTTTGGAAGAAACTGTAGAATCTATGGAGGAAACTGTTGAG TTAAAGCTTGAATCTTTGGAGGATCTTAAAGTAGTAGAAGAAGAAGGGATGGTTTTCACT GAGGTTGTTAAACCAAAAAAGAAAAGGGGGAGACCACCCAACAAAAATAAGGGAAAACTA AAATTGGAGGAAGACACAGGAAAAGAGACTTGTATTAAGAAAAACACGAATCTTGGTAGG AAAAAGAATCATGTTCAAAAAAAGAATCATGTCAATGAAAAAGAAGACGAAATTGATAGT ATGAGAGAAGAGGAAAAAATTGATTTTGATAGAGTCAGTGCTACTCATAGGCCAGTGAGG TCGTCACGTAAAAAAGCTATTGAGAAGATAACTGAATTTTCTCTGCAAATGAATGAATGG GATGAAGAAGATCTTAGTGCTCATAAGAAAAGAAGGGGTCAAGGCAGGAAGAGTGGCGTC AAAACAGAAGAAGGGAATGCAGATAGTGGTCAGAAAATTGCAAGTAAAAAACGTGGAATA ATGAGTTTGAAAGTGAATGGTGGAGATTCTAATAGTAAAGAGGAGGAGGGTAATGGGAGT AAAAAACATAGGGCTGAGGAACAAGACAAAGTGGAAAGATCAGAGTCTGCAAGGCAAAGC AAAGATAATGCATCAAATCCCCGTGCTAGAAAGAGGAAGGATGAGAATGGTAATGAGATT CTATCAAATATGTGTCATCAGTGCCAGAGGAATGACAAAGGAAGGGTTGTTCGCTGCACC AGCTGTAAAACAAAGCGATACTGCATTCCTTGCATAACCACATGGTACCCTGGAATGCCC GAGGAGGCTTTTGCAGAGTCTTGTCCTGTTTGTCGTCAAAACTGTAATTGCAAAGCATGC TTGCGTTTGGATGGGCCAATAAGGGCTTTGAAGGATTCACAATGTCAGATTAGCGAAGAA GAAAAGTTTGAACATTCAAAATTCATTTTGCAAATACTTTTGCCTTTCTTGAGAAGATTT AATGCAGAGCAAGTGATGGAGAAGGAGATTGAAGCTAAGACTCGAGGGCCATCAGTGTCA GAGTTAGTGCTGAAGAAGGCGAAGTGTCAGAAGAATGAGCGGATGTACTGTAACAACTGC AAAACATCCATTTTTGATTTTCACAGGAACTGTTCTAGCTGTTCCTATGATCTATGCCTT ACTTGTTGCCGGGAGCTTAGAGATGGTCACCTTAAGGGAGGCGATGAAGAAGTCATTGTG GAATTCGTTGACAAGGGGGTTGATTATATGCATGGTGATGTGAGGCCTGGTTCTTCATCA GATACCCGAACTTCAAGAAGGTCTAAATCTTCCAAGAAGATGGTTGAAAATGATTCGGTG GATGATGCCAGGCTTGCATTTGAAATGGAGCCTGGGGATAATGGAGGGCATCTGCAAGAT AATTCTGGTGGTCCTGCTGGTGAATGGAAATCCAATGAAGATGGTAGCATCCCTTGTCCA CCACAGAAGTTTGGTGGTTGTGGTAAGGGAAATTTAGATCTGAAGTGCCTGCTCAACAAG ACAGAAGGTCTCTCTGAGTTGTTGGCAAGAGCTGAAGATATTGCCAAAAGATTTGAATTG GAATACATGCCTGAAATTTCTCAGGGACCATGCTGCTGTAGGAATTCAGTAAATGAAGAT GATATTCAGAAAAGTAAAATGTGTAAAACAGTATCTCGTGACGGGTGTGATGACAACTAT TTATACTGTCCAGCAGCTAAAGATCTTCAGCAGGAGGATTTGAAGCATTTCCAATGTCAC TGGCTGAAAGGTGAGCCTGTGATTGTCCGCAATGTGCTTGAGACTGCGTCAGGGTTAAGC TGGGAGCCCATGGTTATGTGGCGAGCCTGTCGTCAGATAAAGAACTTAAACCACCCTCTT CTTTTGGATGTCGTTGCTATCAATTGCTTAGATTGGTGTGAGGTAGAAGTTAATATCCAT CAGTTTTTTAAGGGATATTTGGAAGGTCGAACTGATAGTGCTGGTTGGCCCCAGATTCTG AAGTTGAAAGATTGGCCTCCATCTGATTTATTCGATGAGCGATTACCTCGTCATGGCGCT GAGTTTGTTAGATGCTTGCCTTTTCAGGAGTACACAAATCCACAAAATGGATTCCTAAAT CTTGCTGTCAAACTGCCACCCAATTCGTTGAAGCCTGACATGGGACCAAAGACATATATT GCTTATGGAGTTCGACAGGAGCTAGGGCGTGGAGACTCTGTGACTAAGCTGCATTGTGAT ATGTCTGATGCGGTGAATGTGTTGACACATACTCAAGCAATAAACCTGACGCCTGAGCAG CTTTCAGTAATGGAAAAAATGAAAAAAAAACATGCTGAACAAGATAAAACTGAACTTCAG ATGGCTGAGGACGAGAAAAAATGCAAAAATGAAGCATCATCTGAGTTGATTGATGACTAC TGTGTGCACAGTGACAGAAGTAGCAGAAGAGATGAAGAAAAAACTGAACATTCTGAAGTT CAAAGCTTGAGTTGTGAACCAGATTGTGGCAATCCTTCAATAATTCCATCTGCTTCTTGT GTCGAACCAGAGGGAGATACTGATGTTGATTTGGTAATAAATGGTGCAATCAATTCTACT AGCTATAGTGAAGCAAGTGGAGGAATTAGAATTGATAATGATAAAAATGACGAGTGCAAA GATGACCCCGTGTTTGGAAAAAATGAAGTATTTGAGGATATGGAAGGCGGTGCACTGTGG GACATCTTTAGAAGGCAAGATGTTGCTAAGTTGGAGGAATATCTTTTGAAGCACTTCAAG GAATTCAGACATATCTACTGTTGCCCGGTCCCACAGGTTATTCACCCTATACATGATCAA ACATTTTACTTGACTGAGGATCACAAAAGGAAGCTTAAGGAAGAGTATGGAGTTGAGCCA TGGACCTTTGTTCAAAAATTGGGAGATGCAATTTTTATACCTGCGGGCTGTCCTCATCAA GTTAGAAACTTGAAGTCCTGTATTAAGGTTGCTCTTGACTTTGTGTCTCCCGAAAATCTT CATGAGTGCATCCGTCTGACTGAAGAGTTCCGCACTCTTCCCCAAAATCACAGAGCCAAG GAAGACAAGTTGGAGGTTAAGAAAATGAGCATTTGTGCAGTGAGAGATGCGGTAATTGAA TTGGAAAAACTTTCAAAGGAATCAACTGGCAATAATGAGAAAAAAAGGCATACAATTATG GATGACGATAGAGAACATTCAGGAGATGATTAG

Peptide Sequence

PEP ID	Solyc04g049140.3.1
PEP Infomation	Transcription factor jumonji (JmjC) domain protein (AHRD V3.3 *** A0A072VKD6_MEDTR)
Sequence	MEETIENKVKFDSLEETEDDIQVKFETLEETVESMEETVELKLESLEDLKVVEEEGMVFT EVVKPKKKRGRPPNKNKGKLKLEEDTGKETCIKKNTNLGRKKNHVQKKNHVNEKEDEIDS MREEEKIDFDRVSATHRPVRSSRKKAIEKITEFSLQMNEWDEEDLSAHKKRRGQGRKSGV KTEEGNADSGQKIASKKRGIMSLKVNGGDSNSKEEEGNGSKKHRAEEQDKVERSESARQS KDNASNPRARKRKDENGNEILSNMCHQCQRNDKGRVVRCTSCKTKRYCIPCITTWYPGMP EEAFAESCPVCRQNCNCKACLRLDGPIRALKDSQCQISEEEKFEHSKFILQILLPFLRRF NAEQVMEKEIEAKTRGPSVSELVLKKAKCQKNERMYCNNCKTSIFDFHRNCSSCSYDLCL TCCRELRDGHLKGGDEEVIVEFVDKGVDYMHGDVRPGSSSDTRTSRRSKSSKKMVENDSV DDARLAFEMEPGDNGGHLQDNSGGPAGEWKSNEDGSIPCPPQKFGGCGKGNLDLKCLLNK TEGLSELLARAEDIAKRFELEYMPEISQGPCCCRNSVNEDDIQKSKMCKTVSRDGCDDNY LYCPAAKDLQQEDLKHFQCHWLKGEPVIVRNVLETASGLSWEPMVMWRACRQIKNLNHPL LLDVVAINCLDWCEVEVNIHQFFKGYLEGRTDSAGWPQILKLKDWPPSDLFDERLPRHGA EFVRCLPFQEYTNPQNGFLNLAVKLPPNSLKPDMGPKTYIAYGVRQELGRGDSVTKLHCD MSDAVNVLTHTQAINLTPEQLSVMEKMKKKHAEQDKTELQMAEDEKKCKNEASSELIDDY CVHSDRSSRRDEEKTEHSEVQSLSCEPDCGNPSIIPSASCVEPEGDTDVDLVINGAINST SYSEASGGIRIDNDKNDECKDDPVFGKNEVFEDMEGGALWDIFRRQDVAKLEEYLLKHFK EFRHIYCCPVPQVIHPIHDQTFYLTEDHKRKLKEEYGVEPWTFVQKLGDAIFIPAGCPHQ VRNLKSCIKVALDFVSPENLHECIRLTEEFRTLPQNHRAKEDKLEVKKMSICAVRDAVIE LEKLSKESTGNNEKKRHTIMDDDREHSGDD*

Transcript Sequence

Transcript ID	Solyc04g049140.3.1
Transcript Infomation	Transcription factor jumonji (JmjC) domain protein (AHRD V3.3 *** A0A072VKD6_MEDTR)
Sequence	AATTGAATAGAAGTATAATTTGAAAAACCGTAAAAAATAAGATGTGATTAGTGGGTGCAG TCAGCAGAGACATGTAATAGAAATCAGAATATAGAGTGCAAAAGGAAGCCGAATATGGCA CAGGTATCTAGGATATGAAGAGCACGCACTTGTCAGACGAAATCGTGTGTAAGGCGGGAC TTTTCGAAACTTTCCCCCCTAAATATATCCATCCACCCACAAGGTTTTTTTGTCACTCTT ACCAAAACCCTAACCCCCAATCCACTGCTTTAACCCCAAACACATAACACTCTACTTACT TCTTTTTTATTCTTTCTGTGGGGAGCCAAAACGTCTATTTCGGGTATTATGGAGGAAACT ATTGAGAACAAGGTAAAGTTTGATTCTTTGGAGGAAACGGAGGATGATATTCAGGTAAAG TTTGAAACTTTGGAAGAAACTGTAGAATCTATGGAGGAAACTGTTGAGTTAAAGCTTGAA TCTTTGGAGGATCTTAAAGTAGTAGAAGAAGAAGGGATGGTTTTCACTGAGGTTGTTAAA CCAAAAAAGAAAAGGGGGAGACCACCCAACAAAAATAAGGGAAAACTAAAATTGGAGGAA GACACAGGAAAAGAGACTTGTATTAAGAAAAACACGAATCTTGGTAGGAAAAAGAATCAT GTTCAAAAAAAGAATCATGTCAATGAAAAAGAAGACGAAATTGATAGTATGAGAGAAGAG GAAAAAATTGATTTTGATAGAGTCAGTGCTACTCATAGGCCAGTGAGGTCGTCACGTAAA AAAGCTATTGAGAAGATAACTGAATTTTCTCTGCAAATGAATGAATGGGATGAAGAAGAT CTTAGTGCTCATAAGAAAAGAAGGGGTCAAGGCAGGAAGAGTGGCGTCAAAACAGAAGAA GGGAATGCAGATAGTGGTCAGAAAATTGCAAGTAAAAAACGTGGAATAATGAGTTTGAAA GTGAATGGTGGAGATTCTAATAGTAAAGAGGAGGAGGGTAATGGGAGTAAAAAACATAGG GCTGAGGAACAAGACAAAGTGGAAAGATCAGAGTCTGCAAGGCAAAGCAAAGATAATGCA TCAAATCCCCGTGCTAGAAAGAGGAAGGATGAGAATGGTAATGAGATTCTATCAAATATG TGTCATCAGTGCCAGAGGAATGACAAAGGAAGGGTTGTTCGCTGCACCAGCTGTAAAACA AAGCGATACTGCATTCCTTGCATAACCACATGGTACCCTGGAATGCCCGAGGAGGCTTTT GCAGAGTCTTGTCCTGTTTGTCGTCAAAACTGTAATTGCAAAGCATGCTTGCGTTTGGAT GGGCCAATAAGGGCTTTGAAGGATTCACAATGTCAGATTAGCGAAGAAGAAAAGTTTGAA CATTCAAAATTCATTTTGCAAATACTTTTGCCTTTCTTGAGAAGATTTAATGCAGAGCAA GTGATGGAGAAGGAGATTGAAGCTAAGACTCGAGGGCCATCAGTGTCAGAGTTAGTGCTG AAGAAGGCGAAGTGTCAGAAGAATGAGCGGATGTACTGTAACAACTGCAAAACATCCATT TTTGATTTTCACAGGAACTGTTCTAGCTGTTCCTATGATCTATGCCTTACTTGTTGCCGG GAGCTTAGAGATGGTCACCTTAAGGGAGGCGATGAAGAAGTCATTGTGGAATTCGTTGAC AAGGGGGTTGATTATATGCATGGTGATGTGAGGCCTGGTTCTTCATCAGATACCCGAACT TCAAGAAGGTCTAAATCTTCCAAGAAGATGGTTGAAAATGATTCGGTGGATGATGCCAGG CTTGCATTTGAAATGGAGCCTGGGGATAATGGAGGGCATCTGCAAGATAATTCTGGTGGT CCTGCTGGTGAATGGAAATCCAATGAAGATGGTAGCATCCCTTGTCCACCACAGAAGTTT GGTGGTTGTGGTAAGGGAAATTTAGATCTGAAGTGCCTGCTCAACAAGACAGAAGGTCTC TCTGAGTTGTTGGCAAGAGCTGAAGATATTGCCAAAAGATTTGAATTGGAATACATGCCT GAAATTTCTCAGGGACCATGCTGCTGTAGGAATTCAGTAAATGAAGATGATATTCAGAAA AGTAAAATGTGTAAAACAGTATCTCGTGACGGGTGTGATGACAACTATTTATACTGTCCA GCAGCTAAAGATCTTCAGCAGGAGGATTTGAAGCATTTCCAATGTCACTGGCTGAAAGGT GAGCCTGTGATTGTCCGCAATGTGCTTGAGACTGCGTCAGGGTTAAGCTGGGAGCCCATG GTTATGTGGCGAGCCTGTCGTCAGATAAAGAACTTAAACCACCCTCTTCTTTTGGATGTC GTTGCTATCAATTGCTTAGATTGGTGTGAGGTAGAAGTTAATATCCATCAGTTTTTTAAG GGATATTTGGAAGGTCGAACTGATAGTGCTGGTTGGCCCCAGATTCTGAAGTTGAAAGAT TGGCCTCCATCTGATTTATTCGATGAGCGATTACCTCGTCATGGCGCTGAGTTTGTTAGA TGCTTGCCTTTTCAGGAGTACACAAATCCACAAAATGGATTCCTAAATCTTGCTGTCAAA CTGCCACCCAATTCGTTGAAGCCTGACATGGGACCAAAGACATATATTGCTTATGGAGTT CGACAGGAGCTAGGGCGTGGAGACTCTGTGACTAAGCTGCATTGTGATATGTCTGATGCG GTGAATGTGTTGACACATACTCAAGCAATAAACCTGACGCCTGAGCAGCTTTCAGTAATG GAAAAAATGAAAAAAAAACATGCTGAACAAGATAAAACTGAACTTCAGATGGCTGAGGAC GAGAAAAAATGCAAAAATGAAGCATCATCTGAGTTGATTGATGACTACTGTGTGCACAGT GACAGAAGTAGCAGAAGAGATGAAGAAAAAACTGAACATTCTGAAGTTCAAAGCTTGAGT TGTGAACCAGATTGTGGCAATCCTTCAATAATTCCATCTGCTTCTTGTGTCGAACCAGAG GGAGATACTGATGTTGATTTGGTAATAAATGGTGCAATCAATTCTACTAGCTATAGTGAA GCAAGTGGAGGAATTAGAATTGATAATGATAAAAATGACGAGTGCAAAGATGACCCCGTG TTTGGAAAAAATGAAGTATTTGAGGATATGGAAGGCGGTGCACTGTGGGACATCTTTAGA AGGCAAGATGTTGCTAAGTTGGAGGAATATCTTTTGAAGCACTTCAAGGAATTCAGACAT ATCTACTGTTGCCCGGTCCCACAGGTTATTCACCCTATACATGATCAAACATTTTACTTG ACTGAGGATCACAAAAGGAAGCTTAAGGAAGAGTATGGAGTTGAGCCATGGACCTTTGTT CAAAAATTGGGAGATGCAATTTTTATACCTGCGGGCTGTCCTCATCAAGTTAGAAACTTG AAGTCCTGTATTAAGGTTGCTCTTGACTTTGTGTCTCCCGAAAATCTTCATGAGTGCATC CGTCTGACTGAAGAGTTCCGCACTCTTCCCCAAAATCACAGAGCCAAGGAAGACAAGTTG GAGGTTAAGAAAATGAGCATTTGTGCAGTGAGAGATGCGGTAATTGAATTGGAAAAACTT TCAAAGGAATCAACTGGCAATAATGAGAAAAAAAGGCATACAATTATGGATGACGATAGA GAACATTCAGGAGATGATTAGAATGGGATTCGCCAGGATTTTGAAGAGACAGATTCAGCA GAACATTTCAGTAGCTCAAAGGAGGATTTTGAAATGAATTGACAAAGGCTCTAATTGTGA AGTCACATTTTGGATTTTGAATGAATATATAGGATTATCCAAGTTTTTGGCTGTATTCTA TATCATTTTTTGTTCAGTTTCTGGGGCCATTTCTGTGCATCTTTTTGTCTAGCTGGTACA TGGATGGTAACACAAATAGTGTAAGCTTGTTGTTCACTGACTTAATACCTCCTTCAATGT AATATATAATGTCATTCATTACTCTTTTAGTAGCGTGCTCTTTGAAACGGGTTGAGTAGA CGTCTATCCCCTTTGACTATTGCTGCGTTCGTTTCAGGTAGAGCGGAACACTTGGGTATT AGGCTTCGTTTCCGGCTTCAAATTAGTGGTATACATATATGATTGGAAATATCTGGGATA CTGGGGGTGTGAACTTGAATTGTTTTGCTATTGATTTAATGGTCTTATGAAGGCTTATGT GATTGTGGTAAATTTTTTTTTACATGTAATGGTAAGCATGGTTTGATTTATGAAAATGTC ATATCACTTGCTGGTGGGCTATATGTATGTGACCAGCACATGTTTAGGCCAAGGTTGTCG TTTTGTGGATAGCGCGATTAAGAAAATATTTATTATTTAAAGTAATATAATTTTTTTAAA CCATAACAAGGTTTTTTGTTGGGTACAATTCAGGGATTTATACAATTAAAAATTCTGATT TATACGACTCAGGGAGTTGCACAAATTTTGAGCGAATTTACAAATTAAACAAATAACAAG ATTTGAAGATATTATGGTTGGGAGTCACAATTTTCCAAAGTTCTATAGCATTTTAATATT TTGTTCCCTGCCCAAAGAATTTTATGATCAAAAGGTTGTTGCATACTTGCATTCTTCATT TATGGTTCTTGTTCAATTTAGATGAATTTTGATTCAAGATCAGATGCATTTTCGGTAAAA CTCACCGATGCAGAAAGTGAAACTTCAATTTTTTTGGAATTTGATTGAAATTTCTCGTCG AGGTTTAAAGATTTGAAAACTATATTAAAGTTATGAATTCAACAATTGTTATCTAGAACA TACATAATATTCCGAAGACATAAACTTATTTAAATAGTACTTTAGTGTCTAAATTCAAGA ATAATATTTTATTTGAATATAGACCCACTTATAATACGTATTGTAGATAAGGAGTAGACA TAA