Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g048900.3.1
CDS Infomation

Calreticulin (AHRD V3.3 *** G7KRL3_MEDTR)
Sequence

ATGGATTGTCTAGTAGTAGTTTTGCTACTTTTTACACTTGTGACTTGTTCAGTATGTGAG
ACCTTCTTTGAAGAACGATTTGATGATGGTTGGCGGAACAAATGGGTGAAGTCTGAGTGG
AAAAGCAGTGAAGGAAAAGCAGGGAAATTTAAGCACACAGCGGGCAACTGGCCTGGTGAT
CCTGATGACAGAGGTCTTCAGACAACAAGTGATGCCAAACATTTTGCCCTCTCTGCAAAG
ATACCGGAATTTAGCAATAAAAACACAACACTGGTTGTACAGTATTCTATTAAGTTTGAG
CAAGATATTGAATGTGGAGGAGGCTACATAAAGCTTCTCTCTGGATATGTCAATCAGAAG
AAATTCGGAGGAGACACCCCATACAGTTTTATGTTTGGACCAGATATATGTGGTACACAG
ACAAAGAAACTTCATGTTATACTTTCCTACCAAGGACAGAATTACCCCATCAAGAAGGAA
TTAGAATGTGAAACGGACAAATTAACACATTTCTACACCTTCATTCTTAGACCTGATGCA
TCATACAGCATCTGGATTGATGGTAGAGAAAGAGATTCTGGAAGTATGTACACAGATTGG
GACATACTTCCTCCCCGCAAAATTAAGGCTGTAAATGCGAAAAAGCCTACTGACTGGGAT
GATAGGGAATATATAGAGAATCCAAATGATGTCAAACCTGAGGGATATGATTCTATTCCA
AGAGAGATTCCGGACCCAAAAGCTAAAAAGCCTATTTACTGGGATGACGAAGATGATGGT
ATGTGGAAGGCACCCAAAGTACCTAATCCAGCATACCGGCCGGGTGCATGGAAAAGGAAG
AAAATTAAGAACCCCAATTATAAAGGGAAATGGAAGATCCCCTGGATTGATAATCCAGAA
TTTGAAGATGATCCTGATCTCTACGTGCTGAAGCCAATCAAATATGTCGGTATTGAAGTT
TGGCAGGTAAAGGCAGGTTCTATTTTTGATAACATTCTGATTGGCGATGATCCAGATTAT
GCAAAACAAGTGATTCAGGAAGTGTTTTCCCATAGGGAGGCTGAAAAGGAGGCTTTCGAA
GAGGCAGAGAAAGTGAGAAAAGCAAAAGAGGAAGAGGAAGCTCAAAGATCAAGAGAGGAA
GGTGAACGGAGGAGACGAGAAAGGGGTAGGGACAGACACCGGGACAGATACAAGAGGCGC
TATCACCATGATTATATGTATGACGATCATGATGAACTTTAA

Peptide Sequence

PEP ID

Solyc04g048900.3.1
PEP Infomation

Calreticulin (AHRD V3.3 *** G7KRL3_MEDTR)
Sequence

MDCLVVVLLLFTLVTCSVCETFFEERFDDGWRNKWVKSEWKSSEGKAGKFKHTAGNWPGD
PDDRGLQTTSDAKHFALSAKIPEFSNKNTTLVVQYSIKFEQDIECGGGYIKLLSGYVNQK
KFGGDTPYSFMFGPDICGTQTKKLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDA
SYSIWIDGRERDSGSMYTDWDILPPRKIKAVNAKKPTDWDDREYIENPNDVKPEGYDSIP
REIPDPKAKKPIYWDDEDDGMWKAPKVPNPAYRPGAWKRKKIKNPNYKGKWKIPWIDNPE
FEDDPDLYVLKPIKYVGIEVWQVKAGSIFDNILIGDDPDYAKQVIQEVFSHREAEKEAFE
EAEKVRKAKEEEEAQRSREEGERRRRERGRDRHRDRYKRRYHHDYMYDDHDEL*

Transcript Sequence

Transcript ID

Solyc04g048900.3.1
Transcript Infomation

Calreticulin (AHRD V3.3 *** G7KRL3_MEDTR)
Sequence

CAACAAGCTTAGAGGTGATTATTTGAGTAAAATACAATTTAAAATATATATATATATATA
TATATGGGGCCACCATTATTTGAGTATTGGAATTTCCACAAAAAGATTGGAAGTTGTCAA
GAAATAAGTTCCCACTAGTAGAAGCAATTCGATTGGAGATAGGCAGGCATTTTTTATTGG
AGGAGATGTTAAGTTATTAGCGTAATTTATATAAAAATGAAGGTCTTAATTGTAAACAAA
GTTTGTATATAAGGTAGCTCAAAGTTTTTGAGGGAAGCAAATAATGGATTGTCTAGTAGT
AGTTTTGCTACTTTTTACACTTGTGACTTGTTCAGTATGTGAGACCTTCTTTGAAGAACG
ATTTGATGATGGTTGGCGGAACAAATGGGTGAAGTCTGAGTGGAAAAGCAGTGAAGGAAA
AGCAGGGAAATTTAAGCACACAGCGGGCAACTGGCCTGGTGATCCTGATGACAGAGGTCT
TCAGACAACAAGTGATGCCAAACATTTTGCCCTCTCTGCAAAGATACCGGAATTTAGCAA
TAAAAACACAACACTGGTTGTACAGTATTCTATTAAGTTTGAGCAAGATATTGAATGTGG
AGGAGGCTACATAAAGCTTCTCTCTGGATATGTCAATCAGAAGAAATTCGGAGGAGACAC
CCCATACAGTTTTATGTTTGGACCAGATATATGTGGTACACAGACAAAGAAACTTCATGT
TATACTTTCCTACCAAGGACAGAATTACCCCATCAAGAAGGAATTAGAATGTGAAACGGA
CAAATTAACACATTTCTACACCTTCATTCTTAGACCTGATGCATCATACAGCATCTGGAT
TGATGGTAGAGAAAGAGATTCTGGAAGTATGTACACAGATTGGGACATACTTCCTCCCCG
CAAAATTAAGGCTGTAAATGCGAAAAAGCCTACTGACTGGGATGATAGGGAATATATAGA
GAATCCAAATGATGTCAAACCTGAGGGATATGATTCTATTCCAAGAGAGATTCCGGACCC
AAAAGCTAAAAAGCCTATTTACTGGGATGACGAAGATGATGGTATGTGGAAGGCACCCAA
AGTACCTAATCCAGCATACCGGCCGGGTGCATGGAAAAGGAAGAAAATTAAGAACCCCAA
TTATAAAGGGAAATGGAAGATCCCCTGGATTGATAATCCAGAATTTGAAGATGATCCTGA
TCTCTACGTGCTGAAGCCAATCAAATATGTCGGTATTGAAGTTTGGCAGGTAAAGGCAGG
TTCTATTTTTGATAACATTCTGATTGGCGATGATCCAGATTATGCAAAACAAGTGATTCA
GGAAGTGTTTTCCCATAGGGAGGCTGAAAAGGAGGCTTTCGAAGAGGCAGAGAAAGTGAG
AAAAGCAAAAGAGGAAGAGGAAGCTCAAAGATCAAGAGAGGAAGGTGAACGGAGGAGACG
AGAAAGGGGTAGGGACAGACACCGGGACAGATACAAGAGGCGCTATCACCATGATTATAT
GTATGACGATCATGATGAACTTTAATTTGGTGTTAAGACCATATACTACATTTCCAGCAT
GGACGCACATACATTTGGGGTTTATTGTGTTCCTCTTGTTGTATTTTGATCTTATTGTAG
CTGTAATTTTGCAAAATGCTCAGGCGTCCGATAAGAAGTGCATATGCCTCTAAAACTATT
AACTATATTTGAAAATTGAGTGTCAGCTTTGGCTACCCAGAGTGATTTTGAAATATGTTT
CAGGACAATGATATTCAGTGATATATATTTGTTCGTGCTCTCGGGATGTTCATATTGAAA
AATTGAACCTTCCAATTATCTAACCATATTTTGAATGCATCATCAGTACTATATTGGCCT
TGAAATTTAAATTTGATGGGGAGACATCTAAGGCTATGACATGGATCTCCTTTCCAAATC
TTTTGCCCTATTGTGTAAGGAATCCTGATTTTAACTTGCCTCTGCAGCAGGCAAATCATT
ACATATAGACATGACCACGGTTTATAAAAGCAGACCTAGGGTAAAGGTGTTGGTGGACTT
TCTATTAGAATTTCTAAGTTTGTAATTATCGAATGACG