Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g045480.3.1
CDS Infomation

Ubiquitin thioesterase (AHRD V3.3 *** K4BRH8_SOLLC)
Sequence

ATGCAGGATCAGGATGTGGATGTGGATGTGGCTGATGCAGCAAAAGAAACGTTTACATCT
TCTGAAACTGATGACTGGAAAAAATACAAGGATGATGATATTATGCAACAGCACTCTGCC
ATACAAGCTGAACAAGCTGTAAAAGTTCCATTTCTTGGTGATAAGGAACCTTTGTCCTCA
TTAGAAGCTGAATACCATCTGGGAAATTCAATTGTGCTTGAGAAAATAAAGGTGCTGAGT
GAACAGTATGCTGCCATTAGAAGAACACGTGGAGATGGGAACTGCTTTTTCCGCAGTTTC
ATGTTTGGTTACCTTGAGCACATTCTGGAATCACAAGATCACAATGAAGTTCAACACATT
AAATCTAATATTGAGGAATGCAAGAAGACACTTCAAAGTTTGGGCTATGCAGAATTCACC
TTTGAAGACTTTTTTGCATTATTCCTCGAGCAACTCGATAGTGTTCTTCAAGGTAGCGAA
GATTCCATAAGTCATGATGAACTCCTGTGCAGAAGTCGTGATCCATCAATTTCTGACTAT
GTTGTTATGTTCTTCAGATTTGTGACATCAGGTGAAATAAGAAAGCGGTCCGAGTTTTTC
GAACCATTTATTCTAGGACTAACAAATACCTCAGTGGAGCAGTTTTGCAAGTCAGCAGTG
GAACCCATGGGTGAAGAGAGTGATCATGTGCAAATTACAGCCCTATCAGATGCATTGGGT
GTACCGATCCGTGTTGTATATCTTGACCGAAGCTCATGTGAGAACAACAGCATCAATGTA
AATCACCATGACTTTATTCCTACTAGCAGGGAGGTCGGGAATAGTGATGTTTCCAAGACC
ACAAATCGTCCATCTATCACCCTGCTGTATCGCCCAGGGCATTATGACATTCTGTACCCC
AAGTGA

Peptide Sequence

PEP ID

Solyc04g045480.3.1
PEP Infomation

Ubiquitin thioesterase (AHRD V3.3 *** K4BRH8_SOLLC)
Sequence

MQDQDVDVDVADAAKETFTSSETDDWKKYKDDDIMQQHSAIQAEQAVKVPFLGDKEPLSS
LEAEYHLGNSIVLEKIKVLSEQYAAIRRTRGDGNCFFRSFMFGYLEHILESQDHNEVQHI
KSNIEECKKTLQSLGYAEFTFEDFFALFLEQLDSVLQGSEDSISHDELLCRSRDPSISDY
VVMFFRFVTSGEIRKRSEFFEPFILGLTNTSVEQFCKSAVEPMGEESDHVQITALSDALG
VPIRVVYLDRSSCENNSINVNHHDFIPTSREVGNSDVSKTTNRPSITLLYRPGHYDILYP
K*

Transcript Sequence

Transcript ID

Solyc04g045480.3.1
Transcript Infomation

Ubiquitin thioesterase (AHRD V3.3 *** K4BRH8_SOLLC)
Sequence

CCTAGTTATGTGCACGGATGATATTTTGAGATCAATCTGTCTCACTTTTGCATTTTAGTA
ATATTTGAATTTTAGATTGAATTGAATAAAACGAGTGTCTATTTTTGGACAAGTGTGTGG
CTAATGAGTTGGGTGTCATAACAAAAACTTCATTTTGAGGCCCAATTGAAGTGGAGCCCA
AAACCCTAAAAGAGTTTGGTTTCGCACCACGTGCTGTGTCACGCCATACCGACCTCTGAC
CCTTGGTACATCTGCGGGTTGTTTGCTTGCTTGCATGAACTAACCTTTCTTCTCCGGTGG
AGGTGGATGTTCTTGCCTGCGATTCCACCCAGATCTGAAGGATCTTACCATCAAACGAAG
AAAGATATAAATAGATATGCAGGATCAGGATGTGGATGTGGATGTGGCTGATGCAGCAAA
AGAAACGTTTACATCTTCTGAAACTGATGACTGGAAAAAATACAAGGATGATGATATTAT
GCAACAGCACTCTGCCATACAAGCTGAACAAGCTGTAAAAGTTCCATTTCTTGGTGATAA
GGAACCTTTGTCCTCATTAGAAGCTGAATACCATCTGGGAAATTCAATTGTGCTTGAGAA
AATAAAGGTGCTGAGTGAACAGTATGCTGCCATTAGAAGAACACGTGGAGATGGGAACTG
CTTTTTCCGCAGTTTCATGTTTGGTTACCTTGAGCACATTCTGGAATCACAAGATCACAA
TGAAGTTCAACACATTAAATCTAATATTGAGGAATGCAAGAAGACACTTCAAAGTTTGGG
CTATGCAGAATTCACCTTTGAAGACTTTTTTGCATTATTCCTCGAGCAACTCGATAGTGT
TCTTCAAGGTAGCGAAGATTCCATAAGTCATGATGAACTCCTGTGCAGAAGTCGTGATCC
ATCAATTTCTGACTATGTTGTTATGTTCTTCAGATTTGTGACATCAGGTGAAATAAGAAA
GCGGTCCGAGTTTTTCGAACCATTTATTCTAGGACTAACAAATACCTCAGTGGAGCAGTT
TTGCAAGTCAGCAGTGGAACCCATGGGTGAAGAGAGTGATCATGTGCAAATTACAGCCCT
ATCAGATGCATTGGGTGTACCGATCCGTGTTGTATATCTTGACCGAAGCTCATGTGAGAA
CAACAGCATCAATGTAAATCACCATGACTTTATTCCTACTAGCAGGGAGGTCGGGAATAG
TGATGTTTCCAAGACCACAAATCGTCCATCTATCACCCTGCTGTATCGCCCAGGGCATTA
TGACATTCTGTACCCCAAGTGATATTCTTCAGCCTGCACTTGTTAGCTTTTTTTCATTTA
GTTTGTGGAAACTTTGCTTATAGATATATTGATATGTATGATCAATGGGTATAGAAACTT
TATTTTACCATCAATAATCTGACTTTGTCGATGAGGGCCGAACTGTAGATAAGTGGAGCT
TTCTTAATCCTCTCATTACAGTGGTTTCTTAGGTGTGGATTAACTTTGAAATTTTCTTTT
GTAAAACTATATAGTAGAAATATATTTTTATTTTGGTAAAGGAAA