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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g040220.3.1
CDS Infomation

BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G3LSH3_LOTJA)
Sequence

ATGAGTAATAATCCTGAAGATCCCTTAAGAAGTCTCTCTTTAGATTATCTCAATCTCCTC
ATCAATGGTCAAGCTTTCAGTGATGTTACTTTTCATGTTGAAGGTCATTTAGTCCATGCT
CACCGTTGCGTCCTGGCAGCAAGGAGTCAATTCTTCAGAAAATTTTTCTGCGGGCCGAGC
TCTCCTCAGTCCGGCCCGCAACTCGGCTCGGTTAACGGGCCGAGAGATACTGGTTCACCA
GCATCATCAGTAGTGATACCGGTGAATTCAGTAGGATATGAGGTGTTTTTATTGATGATG
CAGTTTTTATATAGTGGACAAGTATCAATTGTACCGCAAAAACATGAGCCAAGGCCAAAT
TGTGGAGAGAGAGGTTGTTGGCATACACATTGCACCTCAGCCGTTGATCTTGCACTTGAT
ACACTCTCAGCCGCTAGATCTTTTGGTGTTGAACAACTTGCTTTGCTCACTCAGAAGCAA
TTGGCAATCATGGTAGAAAAAGCTTCAATTGAGGATGTGATGAGAGTTCTAATAGCATCA
AGGAAGCAAGACATGAATCAACTATGGACTACGTGTTCACATTTGGTTGCAAAATCAGGT
CTTCCACCCGAAATGTTGGCCAAACACCTCCCCATTGATGTTGTAGCCAAAATTGAAGAA
CTACGCCTCAAATCCAACCTAGCACGTCGATCCTTAATGCCACATCATCATCACCACCTC
GACCTCAGCTCTTCAGCTGAGCTCGAGGACCAAAAAATCCGTAGGATGAGACGAGCCCTT
GACTCATCGGACGTTGAACTTGTCAAGCTTATGGTGATGGGAGAAGGTTTAAATCTTGAT
GAATCAATTGCACTACACTATGCAGTTGAAAATTGTAGTAGGGAAGTTGTGAAAGCTTTA
CTAGAGCTAGGTGCAGCGGATGTTAATTTCCCTGCAGGACCTGCAGGGAAAACTCCGCTG
CACATTGCTGCTGAAATGGTGTCACCAGACATGGTAGCTGTTCTATTAGACCATCATGCT
GATCCCAATGTACGAATGTTAGATGGCATCACTCCATTGGACATTTTACGTACCCTAACA
TCCGATTTTCTATTTAAAGGAACTGTACCTGGACATGTCCACGTCGAACCTAATAAGTTG
AGACTCTGTCTTGAACTTGTTCAATCAGCAGCTATGGTGATTTCAAGAGAGGAAGGGAGC
GCAAACATTGATCTCTCTTCGACAAATATTTATCCTCCAAATAACATGAGTGATGATCAT
ACATCTAGCACAAGTACTAGTGGGACTAATAACATTGATTCAAGAATGGTGTATTTAAAT
CTTGGTGGTGGAGTTACTAATACTTCTTCAACTCATGATCACCCTTCATCAATGTATCAC
CATTCATCACATGAGTATTAA

Peptide Sequence

PEP ID

Solyc04g040220.3.1
PEP Infomation

BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G3LSH3_LOTJA)
Sequence

MSNNPEDPLRSLSLDYLNLLINGQAFSDVTFHVEGHLVHAHRCVLAARSQFFRKFFCGPS
SPQSGPQLGSVNGPRDTGSPASSVVIPVNSVGYEVFLLMMQFLYSGQVSIVPQKHEPRPN
CGERGCWHTHCTSAVDLALDTLSAARSFGVEQLALLTQKQLAIMVEKASIEDVMRVLIAS
RKQDMNQLWTTCSHLVAKSGLPPEMLAKHLPIDVVAKIEELRLKSNLARRSLMPHHHHHL
DLSSSAELEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDESIALHYAVENCSREVVKAL
LELGAADVNFPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRMLDGITPLDILRTLT
SDFLFKGTVPGHVHVEPNKLRLCLELVQSAAMVISREEGSANIDLSSTNIYPPNNMSDDH
TSSTSTSGTNNIDSRMVYLNLGGGVTNTSSTHDHPSSMYHHSSHEY*

Transcript Sequence

Transcript ID

Solyc04g040220.3.1
Transcript Infomation

BTB/POZ ankyrin repeat protein (AHRD V3.3 *** G3LSH3_LOTJA)
Sequence

GATATTCCCTTTTTCTTTTGTTTAAATACCTCAGCCGCCCAGAATAACCATCCATATTGC
TCCACCCTCTCTCTCTCTAAATATTTTAACCACACAACACAACATTACACAACACAAGAC
AAAACACCAACCATATAGAAAGAAGAATCTCACTCACTCTCATTATTTTCTTTCTTCATT
CAACACTACTCTCAATACTATACAAACATGAACTAAAACCTTTTACTACTATATAGTTTA
TACATAAGCCAAAATAAATATGAGTAATAATCCTGAAGATCCCTTAAGAAGTCTCTCTTT
AGATTATCTCAATCTCCTCATCAATGGTCAAGCTTTCAGTGATGTTACTTTTCATGTTGA
AGGTCATTTAGTCCATGCTCACCGTTGCGTCCTGGCAGCAAGGAGTCAATTCTTCAGAAA
ATTTTTCTGCGGGCCGAGCTCTCCTCAGTCCGGCCCGCAACTCGGCTCGGTTAACGGGCC
GAGAGATACTGGTTCACCAGCATCATCAGTAGTGATACCGGTGAATTCAGTAGGATATGA
GGTGTTTTTATTGATGATGCAGTTTTTATATAGTGGACAAGTATCAATTGTACCGCAAAA
ACATGAGCCAAGGCCAAATTGTGGAGAGAGAGGTTGTTGGCATACACATTGCACCTCAGC
CGTTGATCTTGCACTTGATACACTCTCAGCCGCTAGATCTTTTGGTGTTGAACAACTTGC
TTTGCTCACTCAGAAGCAATTGGCAATCATGGTAGAAAAAGCTTCAATTGAGGATGTGAT
GAGAGTTCTAATAGCATCAAGGAAGCAAGACATGAATCAACTATGGACTACGTGTTCACA
TTTGGTTGCAAAATCAGGTCTTCCACCCGAAATGTTGGCCAAACACCTCCCCATTGATGT
TGTAGCCAAAATTGAAGAACTACGCCTCAAATCCAACCTAGCACGTCGATCCTTAATGCC
ACATCATCATCACCACCTCGACCTCAGCTCTTCAGCTGAGCTCGAGGACCAAAAAATCCG
TAGGATGAGACGAGCCCTTGACTCATCGGACGTTGAACTTGTCAAGCTTATGGTGATGGG
AGAAGGTTTAAATCTTGATGAATCAATTGCACTACACTATGCAGTTGAAAATTGTAGTAG
GGAAGTTGTGAAAGCTTTACTAGAGCTAGGTGCAGCGGATGTTAATTTCCCTGCAGGACC
TGCAGGGAAAACTCCGCTGCACATTGCTGCTGAAATGGTGTCACCAGACATGGTAGCTGT
TCTATTAGACCATCATGCTGATCCCAATGTACGAATGTTAGATGGCATCACTCCATTGGA
CATTTTACGTACCCTAACATCCGATTTTCTATTTAAAGGAACTGTACCTGGACATGTCCA
CGTCGAACCTAATAAGTTGAGACTCTGTCTTGAACTTGTTCAATCAGCAGCTATGGTGAT
TTCAAGAGAGGAAGGGAGCGCAAACATTGATCTCTCTTCGACAAATATTTATCCTCCAAA
TAACATGAGTGATGATCATACATCTAGCACAAGTACTAGTGGGACTAATAACATTGATTC
AAGAATGGTGTATTTAAATCTTGGTGGTGGAGTTACTAATACTTCTTCAACTCATGATCA
CCCTTCATCAATGTATCACCATTCATCACATGAGTATTAAGATTGTATATATAAATTGAG
ACCAACTAGAAAGGAAAGTCAATCATCTCAATATTATGATCTATATATAGTTACATGTAT
ACCTTTGCTCTTTAGCGTACTATTTTGTGCGGTGTCACGGACTTAGAGTTTTACTAATAT
TTTGTGCGGCACTTGACAACTGGGTTATGACATTGGCCTATGTTAGTTGCTTAGATTCTT
CGAGAATATTATCACTTTCGTGTAAGATATTCTTTAAAGGGCATTGATGAGATGATAATG
CAATGGGGAAATTATTGGACGAGAGTTGAGACAAAGGAGAATCTGAGTTTTTGCTTTGTG
AAGAGGAAAGGACACAGGTCAATCTTGTCACCTCTGTCCTGTCAATTACTTTTTTGTTTT
ATTTTTAAGGAAATTATTTATTTATATAGATGGTAAAATAAATAGCATATTAATCAATA