Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g026020.3.1
CDS Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

ATGACAAGTGTTAATCCATTGAATGAAAAGGTATCCATGACTACAAACTCAACAAATAAT
ACGTCAAGTGGATCTTCTGATGTTGCTGCCAATAGGATGCACCCAATGAGTAATCATATC
AACCCTTTGAATGTCCAAATCAATCCTCATTCTGTTGTCAAACCAGCGAGTCATGACACG
ATACCAGCTACCGCAGTACCTGCTGCTCATCATACAACTCCAATCAATCCACAAACATCA
AATCTCGCAGCTAGGCTTCCACACAGGAGAGGTGATCATCGTATGTTCTTGGCATCTGAT
GACAATACAATGATGAAGCACATTGAAGAAACTCATATTCCAGATGGTCGTGACTTTGAT
GTCAAGCCTCTTGTTCATATTATTGAGGACATTGTGCATCGCGCTACTCCCATTGCTGGA
CATGTTCATGAAGCTAAAGTTCAGGCACATCTGCAAGCATTGGACGAGAAGGCGCCCCAC
AGTGGACTTACTGAAATACTCTACTATTTGGCATATCCTATACAAAGGATTAAAGTGGAG
TTGATCAGCAAATGTGCTAAAAAAGAAGACGCTCATTCAACAACAATGTCACTGCTTCAC
TCACTCACAACCTATGCCTGGGACACGAAAGTAGCAATAACCTTCGCAGCTTTTGCCCAG
CTATATGGTGAATTCGGTCTGCTTGTTCATCAGTACACCACAAATCCACTGGCTAAGTCT
GTTGCAATCATCATGGAACTTCCAGAAATTATGACGCATCAGGATGTTCTCAAGCAGAAA
TTCGATGCAATCCATGATCTGATTGACAAAATGTTGGATGTCACAAAGTGCATTATCGAG
TTTAGAGACGTTCAATCGTCTCACAGTCAACATGTTATCACACAAGAATTGGAAATGTTG
ATCAATACTGCCCATATTTCCACTGCTGCTTATTGGACTATGAGGGCTGCTGTTATGTGT
GCAGCTATGATTTTGAATCTCATTGCCATCGGCCACGAGCAAATTTCTTCAACATCGGAG
GCTTGGGAGATATCTAATTTGGCTCACAAGCTTGCAAACATATTGGATCACCTGAGAAAG
GTTCTTAACCTTTGTCACCAAAAGATTGAGGAGAAGAGGCAATATGATGCATTTGAAGCA
ATTCTACGACTTCTAAGGACACCTCAACTTGATAACATGAAGATACTCTCAATGTTGATT
CACTCCAGGGATGATCAGCTCCCACTTTTTGACGGAACTCATAAGAGAAGGGTTAGTCTT
GATGTGCTAAGAAGGAAGCATGTTTTACTTTTGATCTCCGACTTAGACATTGCATCTGAA
GAGCTGTTTGTTCTCCACCACATGTACGATGAATCTAAGACACAACCAAACAGGCCAGAG
AGCAACTATGATGTTGTCTGGATGCCTGTGGTGGACAAGAGACTAACACCATGGACTGAA
GCAAAACAAATGAAATTTGAAGAAGTACAAGCTTCAATGCCATGGTACTCAGTGGCACAT
CCTTCAATGATGGATCCAGCAGTGCTAAGGTGCATTAAAGAAGTGTGGGGATTCAAGAAA
AAGCCTCAGCTTGTTGTTCTTGATCCTCAAGGCAAAGAATCAAACAATAATGCTTACCAT
ATCTTGTGGATTTGGGGAAGTTTGGCCTTTCCTTTTACCAAAGCTAGGGAAACAGCTCTG
TGGAAGGAACAAACTTGGAATATTGAACTCTTAGCTGATTCCATTGATCAAAACGTTTTC
ACTTGGATTAGTGAAGGGAAATGCATATGCTTGTACGGAGGAGAAGATATTGAGTGGATC
AGATCATTCACCTCAGCAACGCGGGCTGTTGCAAATGCAGCCCGCGTTCCACTAGAGATG
CTCTACGTGGGGAAAAAAAACCCAAAAGAAAGAATCCGGAAGAACAACTCAATAATCCAA
ATTGAAAACTTGAGCCACGTGGTGCAAGACCAAACTCTAATTTGGTTCTTTTGGGAAAGG
CTAGAAAGCATGTGGCATTCCAGGACTCAACAAGACATCCCAGGTGAAACTGACCCGATC
CTTCAGGAAATTGTGACGATTCTGAGCTATGATGGAAGTGATCTTGGATGGGCTGTTTTC
AGCCGTGGATTGGTTGAAATGACTAGAGGTAAAGGTGATTTGATAGTGCAAGTTATGAAG
GGATTTGATCGTTGGAGAAATGAAGTGAGTGACATTACTACATTTGTTCCTGCATTGGAC
CGTCAACTTCGTGATCTTCATAGTCCTCATCATTGTACTCGACTAATTCTACCGAGTACC
ACTGGACATGTTCCTGAGAGAGTAATTTGTGCTGAATGTAGCCGTCCAATGGAGAAGTTT
ATCATGTACCGATGCTGCACTGATTGA

Peptide Sequence

PEP ID

Solyc04g026020.3.1
PEP Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

MTSVNPLNEKVSMTTNSTNNTSSGSSDVAANRMHPMSNHINPLNVQINPHSVVKPASHDT
IPATAVPAAHHTTPINPQTSNLAARLPHRRGDHRMFLASDDNTMMKHIEETHIPDGRDFD
VKPLVHIIEDIVHRATPIAGHVHEAKVQAHLQALDEKAPHSGLTEILYYLAYPIQRIKVE
LISKCAKKEDAHSTTMSLLHSLTTYAWDTKVAITFAAFAQLYGEFGLLVHQYTTNPLAKS
VAIIMELPEIMTHQDVLKQKFDAIHDLIDKMLDVTKCIIEFRDVQSSHSQHVITQELEML
INTAHISTAAYWTMRAAVMCAAMILNLIAIGHEQISSTSEAWEISNLAHKLANILDHLRK
VLNLCHQKIEEKRQYDAFEAILRLLRTPQLDNMKILSMLIHSRDDQLPLFDGTHKRRVSL
DVLRRKHVLLLISDLDIASEELFVLHHMYDESKTQPNRPESNYDVVWMPVVDKRLTPWTE
AKQMKFEEVQASMPWYSVAHPSMMDPAVLRCIKEVWGFKKKPQLVVLDPQGKESNNNAYH
ILWIWGSLAFPFTKARETALWKEQTWNIELLADSIDQNVFTWISEGKCICLYGGEDIEWI
RSFTSATRAVANAARVPLEMLYVGKKNPKERIRKNNSIIQIENLSHVVQDQTLIWFFWER
LESMWHSRTQQDIPGETDPILQEIVTILSYDGSDLGWAVFSRGLVEMTRGKGDLIVQVMK
GFDRWRNEVSDITTFVPALDRQLRDLHSPHHCTRLILPSTTGHVPERVICAECSRPMEKF
IMYRCCTD*

Transcript Sequence

Transcript ID

Solyc04g026020.3.1
Transcript Infomation

Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)
Sequence

CTCAATAGCTTTACAACACACAACAATATTTAACTACACTTGCCTCTCCAAAATCTCTTT
ATTTTTTTTCCTCCCTCGAAATGACAAGTGTTAATCCATTGAATGAAAAGGTATCCATGA
CTACAAACTCAACAAATAATACGTCAAGTGGATCTTCTGATGTTGCTGCCAATAGGATGC
ACCCAATGAGTAATCATATCAACCCTTTGAATGTCCAAATCAATCCTCATTCTGTTGTCA
AACCAGCGAGTCATGACACGATACCAGCTACCGCAGTACCTGCTGCTCATCATACAACTC
CAATCAATCCACAAACATCAAATCTCGCAGCTAGGCTTCCACACAGGAGAGGTGATCATC
GTATGTTCTTGGCATCTGATGACAATACAATGATGAAGCACATTGAAGAAACTCATATTC
CAGATGGTCGTGACTTTGATGTCAAGCCTCTTGTTCATATTATTGAGGACATTGTGCATC
GCGCTACTCCCATTGCTGGACATGTTCATGAAGCTAAAGTTCAGGCACATCTGCAAGCAT
TGGACGAGAAGGCGCCCCACAGTGGACTTACTGAAATACTCTACTATTTGGCATATCCTA
TACAAAGGATTAAAGTGGAGTTGATCAGCAAATGTGCTAAAAAAGAAGACGCTCATTCAA
CAACAATGTCACTGCTTCACTCACTCACAACCTATGCCTGGGACACGAAAGTAGCAATAA
CCTTCGCAGCTTTTGCCCAGCTATATGGTGAATTCGGTCTGCTTGTTCATCAGTACACCA
CAAATCCACTGGCTAAGTCTGTTGCAATCATCATGGAACTTCCAGAAATTATGACGCATC
AGGATGTTCTCAAGCAGAAATTCGATGCAATCCATGATCTGATTGACAAAATGTTGGATG
TCACAAAGTGCATTATCGAGTTTAGAGACGTTCAATCGTCTCACAGTCAACATGTTATCA
CACAAGAATTGGAAATGTTGATCAATACTGCCCATATTTCCACTGCTGCTTATTGGACTA
TGAGGGCTGCTGTTATGTGTGCAGCTATGATTTTGAATCTCATTGCCATCGGCCACGAGC
AAATTTCTTCAACATCGGAGGCTTGGGAGATATCTAATTTGGCTCACAAGCTTGCAAACA
TATTGGATCACCTGAGAAAGGTTCTTAACCTTTGTCACCAAAAGATTGAGGAGAAGAGGC
AATATGATGCATTTGAAGCAATTCTACGACTTCTAAGGACACCTCAACTTGATAACATGA
AGATACTCTCAATGTTGATTCACTCCAGGGATGATCAGCTCCCACTTTTTGACGGAACTC
ATAAGAGAAGGGTTAGTCTTGATGTGCTAAGAAGGAAGCATGTTTTACTTTTGATCTCCG
ACTTAGACATTGCATCTGAAGAGCTGTTTGTTCTCCACCACATGTACGATGAATCTAAGA
CACAACCAAACAGGCCAGAGAGCAACTATGATGTTGTCTGGATGCCTGTGGTGGACAAGA
GACTAACACCATGGACTGAAGCAAAACAAATGAAATTTGAAGAAGTACAAGCTTCAATGC
CATGGTACTCAGTGGCACATCCTTCAATGATGGATCCAGCAGTGCTAAGGTGCATTAAAG
AAGTGTGGGGATTCAAGAAAAAGCCTCAGCTTGTTGTTCTTGATCCTCAAGGCAAAGAAT
CAAACAATAATGCTTACCATATCTTGTGGATTTGGGGAAGTTTGGCCTTTCCTTTTACCA
AAGCTAGGGAAACAGCTCTGTGGAAGGAACAAACTTGGAATATTGAACTCTTAGCTGATT
CCATTGATCAAAACGTTTTCACTTGGATTAGTGAAGGGAAATGCATATGCTTGTACGGAG
GAGAAGATATTGAGTGGATCAGATCATTCACCTCAGCAACGCGGGCTGTTGCAAATGCAG
CCCGCGTTCCACTAGAGATGCTCTACGTGGGGAAAAAAAACCCAAAAGAAAGAATCCGGA
AGAACAACTCAATAATCCAAATTGAAAACTTGAGCCACGTGGTGCAAGACCAAACTCTAA
TTTGGTTCTTTTGGGAAAGGCTAGAAAGCATGTGGCATTCCAGGACTCAACAAGACATCC
CAGGTGAAACTGACCCGATCCTTCAGGAAATTGTGACGATTCTGAGCTATGATGGAAGTG
ATCTTGGATGGGCTGTTTTCAGCCGTGGATTGGTTGAAATGACTAGAGGTAAAGGTGATT
TGATAGTGCAAGTTATGAAGGGATTTGATCGTTGGAGAAATGAAGTGAGTGACATTACTA
CATTTGTTCCTGCATTGGACCGTCAACTTCGTGATCTTCATAGTCCTCATCATTGTACTC
GACTAATTCTACCGAGTACCACTGGACATGTTCCTGAGAGAGTAATTTGTGCTGAATGTA
GCCGTCCAATGGAGAAGTTTATCATGTACCGATGCTGCACTGATTGAGGATTTATTATGG
TACGTCTGGCATGAAGTTGTGTTTTTCTAGAGGACTATATACTTAATTTGAATAAATTGA
CCACTACTAGTCCTCTGTTTGTGCTTACTTTAATTTATCTTTATGTTTGTAATAAAAATA
CCATGTACTAGCTTTTTGATATTCATGATCTTGTTTTTGAAATTTGAGTATGTGATGTAT
TAATGCTAATGAAAATTAATAAACAACATTTCCAATTATGCAAAGT