Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g025300.3.1
CDS Infomation

sgs3 innate immune response protein
Sequence

ATGAGTTTCAGCAAATGGGGTGGGAAGCCTTCAAATTCATCAGAAAAGCAGAAAGCTTCC
TCTACACCAACAGTTGAGGAGATAAATCGAGGTGTTGGAGATATTGGTTTGAACTCTGAA
CAGAATGAAGGATGGGAAGTGTATGCTAGGAAGCCCAAGAACAAGGGTGGAAGCAGTGCT
GGGAAGCAATGGGCTCCTCAGAATCCTAGTCCAAAAGCTTGGGGAAACCAGAATACTAAA
GCTTGGGGTCATCCAGATGTTGGTAAGAAATCGGGAACGCGTAACAATGCTGGATCAGGG
CGGGGTTCTGGAAATAACTGGTCTACACCTAGTGATCCTCAAAAACTTGCAAGGCCGCAT
CTATATGATGGAGGTTTCCCATCATCTGCTCCAGTTCCTCCTGCTCTGAAGAATGGTTGG
GATTGGTCTTCTAGAGTAGCCTCAGCTCATCCCAAGGATAATTCCCAGGTTGCTGCTGCT
GCTGATGATGATAAGGCCAGTGAACATGATGCTGAGGATAATGAATTGGATTTTCTTGAT
GAAAGTGATGATGACCTTCACAGTGATGACTTTGATTCAGATGTGGGTGAAATGAGTTAT
GAGACACGCAAGAAAAATCCTTGGTTCAATCAACTTTTTCACTCTCTTGACAGTTTGACT
GTCACTGAGATCAATGAGCCTGAACGACAGTGGCACTGCCCTGCATGCAAAGGTGGTCCA
GGCGCAATTGAATGGTTTACAGGGTTGCAATCATTGATGACCCATGCAAAAACGAAAGGA
TTAAGGGTTAAAATACACAGAGAACTTGCTGAACTTTTGGAGGAAGAGCTTCGTCAGAGA
GGTACTTCTGTTGTACCTCCAGGTGAAGTGTATGGAAGATGGGGTGGCATGGAATTTAAA
GATAAAGAAATTGTGTGGCCACCAATGGTGATTATCATGAACACAAGGCTTGATAAAGAT
GAAAACGATAAGTGGATTGGAATGGGGAATCAGGAGCTGCTTGAGTATTTTAGCTCTTAT
GCTGCTGTCAAGGCTCGACATTCATACGGTCCACAAGGCCATCGTGGCATGAGTTTGTTG
ATTTTTGAGGCCTCTGCAGTGGGATACATTGAGGCTGATCGTCTCAGTGAGCATTTTTCT
GAAAATGGAAGAAATAGAGATGCATGGGAACGTCGTTCAGCCCGCTTTTATCCTGGGGGG
AAACGTCTGCTCTATGGTTACATGGCAGATAAAAAAGACATAGATAACTTCAATCAGCAT
TCAGCTGGGAAATCAAAGTTGAAGTTTGAGATGCGGTCATACAAAGAAGCTGTTTGGAAT
CCAGCCAAACAGATGAGGGAAGATAATCAACAACTAATATGGTTCAAGAACAAAGCTGCT
AAACACCAAATGCAGGCTAAAGCTCTTGAAGAGTCTCTCAGTTTGGTGAGTGAAAAACAC
CGTCAGACATTGGAAGAGAACAAGATAGTCAGATTGAAAACAAAGATGCACCATGAACAG
ATCAAGGAAGAGATGGAGTTTCAAGAACAGTTCTTCAAGGATCAGATCAAAATAATTCAT
GATGCCAGGACTGCCAGGGAGGACAATTTTGAAAAGACACAGCAGGAGCAGCGTGAGATG
GTTAAACAATCTAATGCCAATACTGCCTCGGTTGAGGATCATCGGGTCAGGGCAGAGAAA
GTTGCCAAATTTATCAAACTCCAGGACAAGGAAATGGAGGAGTTTGTGGAAGAGAGGGAG
AATCTGATGCGAACTCATGACGATAGGATAGCTGCATTGAGACGCAAATACTGGGAAGAG
GAGGTTGAACTTGAAAGGAAATTTGACCTTGAACTGTCTAAACTGATGGAGAAGTACTCT
CCGAAGCAATCAGATGAGGTCAATAGCAGTGGCACCATGTGA

Peptide Sequence

PEP ID

Solyc04g025300.3.1
PEP Infomation

sgs3 innate immune response protein
Sequence

MSFSKWGGKPSNSSEKQKASSTPTVEEINRGVGDIGLNSEQNEGWEVYARKPKNKGGSSA
GKQWAPQNPSPKAWGNQNTKAWGHPDVGKKSGTRNNAGSGRGSGNNWSTPSDPQKLARPH
LYDGGFPSSAPVPPALKNGWDWSSRVASAHPKDNSQVAAAADDDKASEHDAEDNELDFLD
ESDDDLHSDDFDSDVGEMSYETRKKNPWFNQLFHSLDSLTVTEINEPERQWHCPACKGGP
GAIEWFTGLQSLMTHAKTKGLRVKIHRELAELLEEELRQRGTSVVPPGEVYGRWGGMEFK
DKEIVWPPMVIIMNTRLDKDENDKWIGMGNQELLEYFSSYAAVKARHSYGPQGHRGMSLL
IFEASAVGYIEADRLSEHFSENGRNRDAWERRSARFYPGGKRLLYGYMADKKDIDNFNQH
SAGKSKLKFEMRSYKEAVWNPAKQMREDNQQLIWFKNKAAKHQMQAKALEESLSLVSEKH
RQTLEENKIVRLKTKMHHEQIKEEMEFQEQFFKDQIKIIHDARTAREDNFEKTQQEQREM
VKQSNANTASVEDHRVRAEKVAKFIKLQDKEMEEFVEERENLMRTHDDRIAALRRKYWEE
EVELERKFDLELSKLMEKYSPKQSDEVNSSGTM*

Transcript Sequence

Transcript ID

Solyc04g025300.3.1
Transcript Infomation

sgs3 innate immune response protein
Sequence

CTTTTTTTTATTTTTTATATAAAGGTGTCACAGTGTGAATGGCAGATTCTTGAATTCATC
AACTAGTTCTCCATTTACTCTCACTCAAAGACAAACTCTACACTCGCTCTTCTTTCTCCG
GCGAACTTCGGTTCTACTCTTTCTACCACCGCCGTTCATTTATCCCGGTGAAGCCCAGCT
CTAACAGCTTCATCCAAAGATGAGTTTCAGCAAATGGGGTGGGAAGCCTTCAAATTCATC
AGAAAAGCAGAAAGCTTCCTCTACACCAACAGTTGAGGAGATAAATCGAGGTGTTGGAGA
TATTGGTTTGAACTCTGAACAGAATGAAGGATGGGAAGTGTATGCTAGGAAGCCCAAGAA
CAAGGGTGGAAGCAGTGCTGGGAAGCAATGGGCTCCTCAGAATCCTAGTCCAAAAGCTTG
GGGAAACCAGAATACTAAAGCTTGGGGTCATCCAGATGTTGGTAAGAAATCGGGAACGCG
TAACAATGCTGGATCAGGGCGGGGTTCTGGAAATAACTGGTCTACACCTAGTGATCCTCA
AAAACTTGCAAGGCCGCATCTATATGATGGAGGTTTCCCATCATCTGCTCCAGTTCCTCC
TGCTCTGAAGAATGGTTGGGATTGGTCTTCTAGAGTAGCCTCAGCTCATCCCAAGGATAA
TTCCCAGGTTGCTGCTGCTGCTGATGATGATAAGGCCAGTGAACATGATGCTGAGGATAA
TGAATTGGATTTTCTTGATGAAAGTGATGATGACCTTCACAGTGATGACTTTGATTCAGA
TGTGGGTGAAATGAGTTATGAGACACGCAAGAAAAATCCTTGGTTCAATCAACTTTTTCA
CTCTCTTGACAGTTTGACTGTCACTGAGATCAATGAGCCTGAACGACAGTGGCACTGCCC
TGCATGCAAAGGTGGTCCAGGCGCAATTGAATGGTTTACAGGGTTGCAATCATTGATGAC
CCATGCAAAAACGAAAGGATTAAGGGTTAAAATACACAGAGAACTTGCTGAACTTTTGGA
GGAAGAGCTTCGTCAGAGAGGTACTTCTGTTGTACCTCCAGGTGAAGTGTATGGAAGATG
GGGTGGCATGGAATTTAAAGATAAAGAAATTGTGTGGCCACCAATGGTGATTATCATGAA
CACAAGGCTTGATAAAGATGAAAACGATAAGTGGATTGGAATGGGGAATCAGGAGCTGCT
TGAGTATTTTAGCTCTTATGCTGCTGTCAAGGCTCGACATTCATACGGTCCACAAGGCCA
TCGTGGCATGAGTTTGTTGATTTTTGAGGCCTCTGCAGTGGGATACATTGAGGCTGATCG
TCTCAGTGAGCATTTTTCTGAAAATGGAAGAAATAGAGATGCATGGGAACGTCGTTCAGC
CCGCTTTTATCCTGGGGGGAAACGTCTGCTCTATGGTTACATGGCAGATAAAAAAGACAT
AGATAACTTCAATCAGCATTCAGCTGGGAAATCAAAGTTGAAGTTTGAGATGCGGTCATA
CAAAGAAGCTGTTTGGAATCCAGCCAAACAGATGAGGGAAGATAATCAACAACTAATATG
GTTCAAGAACAAAGCTGCTAAACACCAAATGCAGGCTAAAGCTCTTGAAGAGTCTCTCAG
TTTGGTGAGTGAAAAACACCGTCAGACATTGGAAGAGAACAAGATAGTCAGATTGAAAAC
AAAGATGCACCATGAACAGATCAAGGAAGAGATGGAGTTTCAAGAACAGTTCTTCAAGGA
TCAGATCAAAATAATTCATGATGCCAGGACTGCCAGGGAGGACAATTTTGAAAAGACACA
GCAGGAGCAGCGTGAGATGGTTAAACAATCTAATGCCAATACTGCCTCGGTTGAGGATCA
TCGGGTCAGGGCAGAGAAAGTTGCCAAATTTATCAAACTCCAGGACAAGGAAATGGAGGA
GTTTGTGGAAGAGAGGGAGAATCTGATGCGAACTCATGACGATAGGATAGCTGCATTGAG
ACGCAAATACTGGGAAGAGGAGGTTGAACTTGAAAGGAAATTTGACCTTGAACTGTCTAA
ACTGATGGAGAAGTACTCTCCGAAGCAATCAGATGAGGTCAATAGCAGTGGCACCATGTG
ACCTATATTCTTATAGTATTCAAATATCATAGGCGCACTTTAAATTGCTGATGAACTTAG
GATGTATGACTTCAAACATGACATGTGAGGAAGGCCCTTATCTTAATAGTCAAGCTGGGT
AGTTGCAAGAAAATGAGGTTTCGTGCTGCACAAACTTTTTTTCATATCCTGGTCTGACCA
TGAGTCGTGATGACTATTGATGCTATTCAGATATTGTAAAACCTGTCTAGCACCCTCTAT
TTGATCACTTAAATTGTGACTGATCTGATCACAACTTGTGTTAGGATACGAGAGTGCTTG
TACAAGCTACTTTTGTGCATTTGCTCTTATGTCTCTACCAGAAATGCTTGCTTCATCTCC
AGTCATTCTTTTTTTTCCTTGTGATTGAATTTCATTTTGGTAGATACGTCTTCCTCCAAC
ACGTCTCCTCTCTCTCTCCCACACGCACAAAAAGATATTTCAATTACTTTCGAGTATAAA
ATTTGACAGCTTTTGTTGGTTGTGAGCATACATACCGCTTTTGAGATTTGTTATTTTGAA
CTATTTTGTTGAATATTGTCTTTTTTCCCTTTCATACTTCAATATGTCATTTTCCTATTA
ACTAAACACAACAATTATAGAAAGATGGGAACAAATCTCAAATACAAGGTAATAACAACA
TTAAAGATGTTGTATCTAGTGATTCATTTGCATTATCAAGTGAGTCCACTAGGATTTGCT
GCCAAACTGTACTTGTGCTTAAGGTAGGCTTTGATAAAAGGATCTAACTCACCATCCATC
ACAGAGGTGATATCACAAGTTTCATAAGCAGTCCTTACATCTTTTACTAGCTTGTAAGGA
TGGAAGACATAGTTTCTTATTTGCTGGCCCCATTCCGCCTTCACCGTGTCTCCTCTTATT
TGCTTTATTTCTGATGCCCTTTGTTCCTCTGCAATCACCAATAATTTTGCCTTCAATCTG
CTTAGAGCTTTTATCTTATTTGCCAGCTGTGACCTCTCCTCTGCAATTGTTAAGCTATAT
TATTAGTATCACACATCAATTCCAAATAAACCACACCTTAGGGAAAAGAGATGATCATTT
TTGGTCTATTCCGTACATTTGTTTATATTGTTCTTCCACTAATATTCCATTTTACTTTAG
TTGCAGCTAGAATACTATAATAGATTTGCGATTAATACTTTAGACAAGAAAATTAATGCT
TTAACCATAGCTCAAAATCTAACAAGAGAAAGAAGACCAAAGGATGGGAAGAGAACAAAA
ACACAACGAGCTAAGAACAAAAGTATGCTAGTTTATAACAACTTTACAGCTCTAATCTCA
CTGAGTCCATATGTCAATCTATGTCAGAATTCAGAAAGATCAAACACTTATCCACTAGAA
CCAAAAGGTCGCTCCATCTCAAACTTCTTCGCTACAGATGTCACATAATATAATAAAGAG
AAAAAGGTTTCAAAGAAACCTGTACAGCGAACAGCTACACCAGTGGGAATATGAGTGATG
CGAACTGCAGTCTCAACCTTGTTAACATTTTGACCTCCCTTTCCACCTGCTCTTGTAAAG
CTGATATCCAAGTCTTCTTCGGGAATTTCAACATTTGTTGAGTCTTCAGGAAGAAGAGGC
ATAACTTCAATGCCAGTGAAGCTTGTCTGCACAGTGGCCACTTCAAAAATTTATGTGTTG
TCCATGTATGTAAACGACAAGATTCTTTTGCTATGAAGATAGAAAAACAGATATATCATA
CTAAGATGCACGATATCATAATAAAGTGGTTAATGAAACAATGATACATTGCTCATTTTT
TACTAGTGTTGTTCTTAAAGGCTCGTTTAAGCACGCTTAAGCCCTGGAACTTGATGAAAA
CCAGCTTCATCTGGCTTAATTGGCCCTTTAGTGTAGGTGTCAAAGTGCTAAGGTGTCTGC
ACTCCAAAAACAGGTTTAGTTTTTTTAGGTTAGAATGAACTTTTTAAAGTTAACTTGTTT
CTAAAAATAAATTAAGTAACCCTCCTTATTTTAAACATCAACATCAGGATCTGAGATCAT
GTGGTCCCCTTATATGATCATGAA