Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g024520.3.1
CDS Infomation

Protein TSSC4 (AHRD V3.3 *** A0A0B0PXY2_GOSAR)
Sequence

ATGGACGATGAGAGCTTCAGAGCACGCTTACACAAAGTATTCGGCTGTCTATCGCCGTCG
GCATCTGTGTGGTCTCTCAGCGACGAAGATGTGGAGAAGAAAGAATGGAATCGAAGCGCA
CTGAAGCAAGGGAAAGACGATGATGACCATAACCTTTGTTCTTCATCGTATGATGAATTA
TTCAAAAAAAAATGCAGGAACATCCAAAATGTAATCAATGATGATGAAAATGGTGTTGAT
GATGTTTGGGAAATCAGATCCTCTATTGGCTTAGATTCCACGCTTGATAATGAGGAGGAG
GAAGATGAATATGATAGAGTCGCCGAGGGCAGAGAGGATGCTGGTGATCGCTTGTACATG
AAAAATATTATTGATCAGGAAATATCTTGTGATCCTCCGGAATATAACATCCGTCGAGAC
CCATGTGCAAATCATATGGCTGCACAAGTTAGGCTGAAGGAAGATGCAGATGCAGCGGAG
AAATGTGAAACTGATTTTGATGGTATCACTCTAACTGGTGGGCAACATTCAGCTAAATCA
CTTCAGGATCACTGTGACGTGAAGCCAATTTTGAAAAAAGCAAGGAAATCAGTGAATGGT
GAGCTCAAGTCTACTAAACGGGTCAGGTTTGATCCTGGTTGTAAAGATGGATCTGACGGG
GCATCAGAAGTAAAAGTTTCTTGGGCAGCTCCTGCATCAGCTAACTCTACTTCTGAAGGC
AATGAATCCATTAGCAGTAGGCTGAAGATTCCTGATTATGTTCTCAACCCTTCATATTAT
ACATGTTATAGTTTGGATTCACCTAGTGAGCTTATTGATGAGCCTAGTCAAGCTTTCGGA
TATGTTCTCGAGGAGGTTGAGAAGTCAAAGGATGATGTATTGGAACAACAAACTATAGAC
ACGTCAGATACTAACCCTAAATCAGTAGTTTTTGTACCAAGGCATAAGAACATGGATGCT
ATAACGGGTGCATCTCTCTCAAAGGGAATAATTGAAGATGCTTGTAATGAGTCCTTGCAC
CCAAAGGGCTTCCCTGTTTGCATTGCTGCTGGAGAAGCTCAACAAACTGAAGATCCAATG
GAAGAAGATATGGAAGCACGTGTGGCTGAGAATAACATTGTGACCCTAAAACCAGAACGC
CGATATCGAATCAAGGTAGGGATGGAGGACTCTTGA

Peptide Sequence

PEP ID

Solyc04g024520.3.1
PEP Infomation

Protein TSSC4 (AHRD V3.3 *** A0A0B0PXY2_GOSAR)
Sequence

MDDESFRARLHKVFGCLSPSASVWSLSDEDVEKKEWNRSALKQGKDDDDHNLCSSSYDEL
FKKKCRNIQNVINDDENGVDDVWEIRSSIGLDSTLDNEEEEDEYDRVAEGREDAGDRLYM
KNIIDQEISCDPPEYNIRRDPCANHMAAQVRLKEDADAAEKCETDFDGITLTGGQHSAKS
LQDHCDVKPILKKARKSVNGELKSTKRVRFDPGCKDGSDGASEVKVSWAAPASANSTSEG
NESISSRLKIPDYVLNPSYYTCYSLDSPSELIDEPSQAFGYVLEEVEKSKDDVLEQQTID
TSDTNPKSVVFVPRHKNMDAITGASLSKGIIEDACNESLHPKGFPVCIAAGEAQQTEDPM
EEDMEARVAENNIVTLKPERRYRIKVGMEDS*

Transcript Sequence

Transcript ID

Solyc04g024520.3.1
Transcript Infomation

Protein TSSC4 (AHRD V3.3 *** A0A0B0PXY2_GOSAR)
Sequence

CACAGTGGGGTACAACTTTTTTTTTTCCAAAAAAGAAAAATCATCGGACTCATAAATTGG
GTAGGCATCTAATCGAAGGCGGTGGTAGGCAAATGATGTATAAAAGGTAACCTAAAGCAA
GCGCAGGAAGTAGAAAGTGGTAAGGCATGGACGATGAGAGCTTCAGAGCACGCTTACACA
AAGTATTCGGCTGTCTATCGCCGTCGGCATCTGTGTGGTCTCTCAGCGACGAAGATGTGG
AGAAGAAAGAATGGAATCGAAGCGCACTGAAGCAAGGGAAAGACGATGATGACCATAACC
TTTGTTCTTCATCGTATGATGAATTATTCAAAAAAAAATGCAGGAACATCCAAAATGTAA
TCAATGATGATGAAAATGGTGTTGATGATGTTTGGGAAATCAGATCCTCTATTGGCTTAG
ATTCCACGCTTGATAATGAGGAGGAGGAAGATGAATATGATAGAGTCGCCGAGGGCAGAG
AGGATGCTGGTGATCGCTTGTACATGAAAAATATTATTGATCAGGAAATATCTTGTGATC
CTCCGGAATATAACATCCGTCGAGACCCATGTGCAAATCATATGGCTGCACAAGTTAGGC
TGAAGGAAGATGCAGATGCAGCGGAGAAATGTGAAACTGATTTTGATGGTATCACTCTAA
CTGGTGGGCAACATTCAGCTAAATCACTTCAGGATCACTGTGACGTGAAGCCAATTTTGA
AAAAAGCAAGGAAATCAGTGAATGGTGAGCTCAAGTCTACTAAACGGGTCAGGTTTGATC
CTGGTTGTAAAGATGGATCTGACGGGGCATCAGAAGTAAAAGTTTCTTGGGCAGCTCCTG
CATCAGCTAACTCTACTTCTGAAGGCAATGAATCCATTAGCAGTAGGCTGAAGATTCCTG
ATTATGTTCTCAACCCTTCATATTATACATGTTATAGTTTGGATTCACCTAGTGAGCTTA
TTGATGAGCCTAGTCAAGCTTTCGGATATGTTCTCGAGGAGGTTGAGAAGTCAAAGGATG
ATGTATTGGAACAACAAACTATAGACACGTCAGATACTAACCCTAAATCAGTAGTTTTTG
TACCAAGGCATAAGAACATGGATGCTATAACGGGTGCATCTCTCTCAAAGGGAATAATTG
AAGATGCTTGTAATGAGTCCTTGCACCCAAAGGGCTTCCCTGTTTGCATTGCTGCTGGAG
AAGCTCAACAAACTGAAGATCCAATGGAAGAAGATATGGAAGCACGTGTGGCTGAGAATA
ACATTGTGACCCTAAAACCAGAACGCCGATATCGAATCAAGGTAGGGATGGAGGACTCTT
GATATTATGTGCACTTGAAGCTAGTATCTGTGTTAATTGTTGAATCAAGGCAGGGATCGA
GGACACTTGATCTTATGTTTACTTGAAGCTAGTTTTGTGTTAATTGTTGAATCAAGGCAG
GGATGTAGGAAACTTGATCTTATGTATACTTGAAGCTAGTATCTGTGCTAATTGTCGAAT
CTGGAGGACACTTGATCTTATGTTCACTGAGAGCTACTATGTGTTAATGATCAGCAAAAA
TATTGTTTGCAAGTTCT