Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g016410.3.1
CDS Infomation	DnaJ (AHRD V3.3 - S6G1R4_ORYSJ)
Sequence	ATGTCGTCGACGGCCGCCGTCACAGATTTCCGATCTTCAATCAGTTCATCTGTTCAATCA TCGAAAACTACCGCTGATTCCAACTCCTCCACTAGTTGTAAGCTTGATGCAGGATTTGAT TGCTCGTTTTCTACTTCATCGTCGGTTCCTCAACCGAGTTCCGGTTTTCTGGGTCGATCA AGGCGGAAGCCAAGGCTGATGAAACAGAGGAAACAATCGGGTCCTCAAATTATCGACCCG AATGAATCGAGTTTTAATCGGGTCGACCCGACCCCCAAGGTTAGTGGTACTGGTACTGTA AATGGGTTTCGCTTTGGGAGAAGTGACAATGTGAGCTTTGGTTTTTGTGCTGGTAAGAGT GATTCTACTTTCAATACGAATTTGGACAGTTTAGGTTCTAACAAGAGTGATGTGGCTGGG AATTCAGGGGCAATGTTGAACAATAAAAATGGAGAATCGTTTGAGAGTGTGGAGGGAATG GGAGGCTGTAGAATTGGAAAAAATGGTAAAGATGGTTTTGTTTTTGGTGCTAGGAAGATT GATTCTGATTTGGATTCATGTTTGGGGAATTTAGGTTTTGCTTTCGGAGCTAGTAATACT AGTAGCTTCAAGTTTAGCTCGAAGAGCAAGCACGGTGATTGGACAAATAAGAGCAGCTCA GCATCCTATCTGAATGTGTCTAATAAGGAGCCTGAATGTAGCGAGAGCAATGGTAATTCG AAGTCAAAAATGGAATTTGGACAGAGGAAGTGTAGTGGCAATGTTGGACAACCACAAGGG GTCAAGAATTGCTTGAGTGAGTCTTATAAAAATGGGCAGTCTAGTACATTGCAATCAGAT AAATTGAATGCTAACTTTGTATTTGGTGCTAGTAAACCTAACTTTGATTCAGAAAAGGGA GCGTGTAATAAAGATGCAGCATACAGGGAACCAGAGTATCAGGGTCCAAAACTGAATGAC ACATTTGTTTTTGGTTGTGGCTTCAAAGGGAAGAATAAAGTGAATGAAGATGGTAAAGTT GCTGAAGACATGGAGAATTTTAGCAGAGAAAAGATTCAAAACCACAATGGTTGTTGGAAT GCCCCAAAAAGTGACACGGGTTGTGATGGGAAGCTCAAGTTTGATTCAAGTAGTAGAAAT ATTGTAGACACTGACTTCCCAAAAACCCCCATTTATAAACTCTCCGATGAGATGAATTCA TTAAACATTGGCCAGCCAGCACCGGTTAATGGTGCTGAGAAGATCAATGGTTTGAATTCA CGTGTCAACATTCAGAATGTATTTTTGTTTGAATTTAACCAAAGTACTTCAAATGTTTCA ACTGAAAACGGTGCTTCTAATTCTTGTGATCTGCCCAAGGATGTCAATTTAAAAGATCCT GTTAGTAGCTCTGGTTTTGATAAAGCTGATACAATTGATGGAGAATCAAATGCCAAGAGA GCTTGTGCATCTGAAATTGGTGAAAATTTTGCTAGTTCATTTAAGGGGGGCAAGGACAAA AGGATCTCTGGAGATACAGTGCATACAAATTCTATGTTTGGTCTTTCGGGTGAGCAAATT AATTCATTTAGCTTTTCAGCAGGAATCTCTGGGAAAGAAAATAAGCCAATAAATTTTAAC AGTGAGTTTGTAGTCTCGAGTGAATTGCCGCAGGATCGTCCAAGTAGTGACACGGAGAGG GATAATATACCCTTCCCATTATTTACCACAGAGATTTTTGGTTCACGGCACAAAGTTGAC ATCCCGGAAGCACCTTCTGGCCATCAAGAAGAAAAGAAAGAAGAATTCAGCTTTCCGAGA ACACCATTTATGCCTGGGAAGTCCTTTTCTGATTTTAGTGCATCCAATTCAAGTAAATCA TTTTCTTTTACTGCTGATTTATTTTCCGGAGTGAATGAAAAATTGGGTTGTGGAACAAGT AGCAGATTGAGGGACAAAAAAGTGAAAAAGAAGAAGTCATTGAGGCAAGAAACCTTGGTA CAGAGGGTAGCTGGGCAGACTGATCTTTCTAATGGAAACAGTTCCACGCACAATGATCAG TCTCCTGGATGTTGTTCACCTATGGATTTTTCACCATATCAGGATACAAATTCTTCTACT TCTGCTGATAATTTTACCAGGGCAACTGAAAGCAAGGGCGATGTGGCTGCTAACAAAGAC ACTCCTGTTTTCAATGACTCTCACAAGAAATGTGGAGAAGGAAATGAGAAATTTTCTGGA ACTGATTCTGGAAAGGACTCTGATACTCGGAGAGATTTTAGTTCCTATACTTCACCTTCT GCTCAAGATGGGTTATCATCCATTAGACGTCAATATAGGAAAAAATACAAATTGAAAGTT GATAGTGGTTCAAACAACATAAATCGCAGAAAAGTTGAGTTTTCCACTGATGCAGTTCAA CATTCTTCCTTTGGTTGCAAAACTTCAGGAGACATCCCAAGCGGAGTTACATCTCATATG AGAAATAAATTTATACATGTGTCTAAAGTAGACGAAGACCATGGGATGCTGGGGCTCACT GACCGTGAAGTCTGTGAAAAGTGGCGGATCAGGGGAAATCAAGCCTATAAGGCTGGAAAT CTTTTGCAAGCTGAGGATTTATACACTAAGGGTATCAAATCAGTCTCTGCTACAGAAATT TCAGGCTCTTGCCTGGATCCTCTTTTGTTATGCTACAGCAACCGAGCTGCCACTCGAATG TCACTTAGAAGGATGAGGGAAGCAATCAGTGATTGTGCATCTGCAGCTGCCTTCGACCCT CACTTTCTAAAAGTAAAACTCAGAGCAGCAAATTGTTATCTGGTTCTTGGTGAGGTTGAA GAAGCAGTTAAGCATTACAACATTTGCTTGGAATCAAGAATTAATTTGTGCTTGGATAGG AGAATTACAATTGAAGCAGCTGAAGGCTTGCAAAAAGCACAGAAAGTATCTGAACATCTG CATCGGTGTGCCGATCTTTTGCAACAAAGAACTCCAGATGCAGCAAAAGATGCACTTGCA ATTACCAATGAAACCTTGTCTATCAGCTGCTATTCAGAAAAGTTACTTGAAATGAAAGGA GAGGCTCTTTGCAAGCTACAGATGTATAATGAAGTGATTGAGCTGTGCGAAAGTTCTCTT GATATTGCTGAAAAGAACTTTACTTCTGACTTCATAAACTTAAATGATGTTGATAGCAAA AGCTCCTCTTTGATGCTTTGGAGATGTCTCCTTAAGTCCAGGGCGCACTTTCATCTTGGA AAGCTTGAGATGGCCCTTGACTTAATTGAGAAACAAGAGCATTTGGTTTCTGTTCAGAAA AGATCTGGAAACATGACCCAGGAATCATCATCTTCTCTAGCAGCCACTATCCATGAACTT TTGCATCAAAAGAAAGCCGGAAATGAGGCATTTAAATCTGGCAAATATACGGAAGCTATT GAACATTATACTGCTGCTATATCCAGCAGTGTTGAGTCGCGCCCTTTTGCAGCTATCTGT TTCTGCAATCGAGCTGCTGCTCACCAAGCTCTTGGTCAAATTGTTGATGCCATAGCAGAT TGCAGTCTTGCCATTGCTCTTGACAAGAACTACACGAAGGCTGTTTCAAGGAGGGCTACC TTACATGAGATGATTAGAGACTATGGGCATGCTGTAAATGATCTTGAGAGGCTCATATCC CTTCAGGAAGCTCAATCTCAAGAAAGGATTCGACAATCTGAGGCGCTGGATAAGTCAAAT GGAAGTAGTGCTAAAGAAGCAAAGCGAACTCGTCGGCAGCTTTCGACAATTCAGGAGAAG GCTAAAAGAGCAACGCCATTGGATCTTTATCTTATTTTGGGAATCAAGTCATCTGATACA GAATCTGACATCAAGAAGGCATATAGGAAAGCAGCCCTCAGACATCATCCTGATAAGGCG GGTCAAATTTTGGCAAGGAGTGATGCCATGGATGATGGAGGGTTGTGGAAAGAGATCTCT GATACTGTCCGCAATGATGCTGATAGGCTGTTCAAGTTGATTGGAGAAGCGTATGCAGTT CTCTCAAATTCCGACAAGCGTGCAAAACATGATTTAGAAGAAGAAATAAGGGATGTTCAA AGGGAAAGAGGGAGAAACAGCGGTTCTTGCAGACCTTCTGATTCTTATTCTTCTCCATTT GAGAGGACGAACTGGTCACGAAGACAATCTAACTTTTACAGTTCTCCATTTGGTAAAAGT AGTAGTAAGCACTATGGACAAGAGTATTGGAGAACCTATGGAGAATCACATCCCAGATGG TAA

Peptide Sequence

PEP ID	Solyc04g016410.3.1
PEP Infomation	DnaJ (AHRD V3.3 - S6G1R4_ORYSJ)
Sequence	MSSTAAVTDFRSSISSSVQSSKTTADSNSSTSCKLDAGFDCSFSTSSSVPQPSSGFLGRS RRKPRLMKQRKQSGPQIIDPNESSFNRVDPTPKVSGTGTVNGFRFGRSDNVSFGFCAGKS DSTFNTNLDSLGSNKSDVAGNSGAMLNNKNGESFESVEGMGGCRIGKNGKDGFVFGARKI DSDLDSCLGNLGFAFGASNTSSFKFSSKSKHGDWTNKSSSASYLNVSNKEPECSESNGNS KSKMEFGQRKCSGNVGQPQGVKNCLSESYKNGQSSTLQSDKLNANFVFGASKPNFDSEKG ACNKDAAYREPEYQGPKLNDTFVFGCGFKGKNKVNEDGKVAEDMENFSREKIQNHNGCWN APKSDTGCDGKLKFDSSSRNIVDTDFPKTPIYKLSDEMNSLNIGQPAPVNGAEKINGLNS RVNIQNVFLFEFNQSTSNVSTENGASNSCDLPKDVNLKDPVSSSGFDKADTIDGESNAKR ACASEIGENFASSFKGGKDKRISGDTVHTNSMFGLSGEQINSFSFSAGISGKENKPINFN SEFVVSSELPQDRPSSDTERDNIPFPLFTTEIFGSRHKVDIPEAPSGHQEEKKEEFSFPR TPFMPGKSFSDFSASNSSKSFSFTADLFSGVNEKLGCGTSSRLRDKKVKKKKSLRQETLV QRVAGQTDLSNGNSSTHNDQSPGCCSPMDFSPYQDTNSSTSADNFTRATESKGDVAANKD TPVFNDSHKKCGEGNEKFSGTDSGKDSDTRRDFSSYTSPSAQDGLSSIRRQYRKKYKLKV DSGSNNINRRKVEFSTDAVQHSSFGCKTSGDIPSGVTSHMRNKFIHVSKVDEDHGMLGLT DREVCEKWRIRGNQAYKAGNLLQAEDLYTKGIKSVSATEISGSCLDPLLLCYSNRAATRM SLRRMREAISDCASAAAFDPHFLKVKLRAANCYLVLGEVEEAVKHYNICLESRINLCLDR RITIEAAEGLQKAQKVSEHLHRCADLLQQRTPDAAKDALAITNETLSISCYSEKLLEMKG EALCKLQMYNEVIELCESSLDIAEKNFTSDFINLNDVDSKSSSLMLWRCLLKSRAHFHLG KLEMALDLIEKQEHLVSVQKRSGNMTQESSSSLAATIHELLHQKKAGNEAFKSGKYTEAI EHYTAAISSSVESRPFAAICFCNRAAAHQALGQIVDAIADCSLAIALDKNYTKAVSRRAT LHEMIRDYGHAVNDLERLISLQEAQSQERIRQSEALDKSNGSSAKEAKRTRRQLSTIQEK AKRATPLDLYLILGIKSSDTESDIKKAYRKAALRHHPDKAGQILARSDAMDDGGLWKEIS DTVRNDADRLFKLIGEAYAVLSNSDKRAKHDLEEEIRDVQRERGRNSGSCRPSDSYSSPF ERTNWSRRQSNFYSSPFGKSSSKHYGQEYWRTYGESHPRW*

Transcript Sequence

Transcript ID	Solyc04g016410.3.1
Transcript Infomation	DnaJ (AHRD V3.3 - S6G1R4_ORYSJ)
Sequence	AAATTTTCTATCTGCGTATATAATAATAATATAAAGAAAAGATCATACCTGACTGACTAA AATTTCAAACGTCAAAACCACAACAAAATTTCAAACGTCAACCTAAACCCCCCTAATTAC CCCGCTCTCCTCTTAACAAAAACCCAAACAACTCAAAAAGATTCCTCTTTTCTTCATCAA AAACCCTAAATCCCTAAATTTGGGTTTTTTTTTTTTGGTGATTATCCGTTTATCTCATCG GATTATGTCGTCGACGGCCGCCGTCACAGATTTCCGATCTTCAATCAGTTCATCTGTTCA ATCATCGAAAACTACCGCTGATTCCAACTCCTCCACTAGTTGTAAGCTTGATGCAGGATT TGATTGCTCGTTTTCTACTTCATCGTCGGTTCCTCAACCGAGTTCCGGTTTTCTGGGTCG ATCAAGGCGGAAGCCAAGGCTGATGAAACAGAGGAAACAATCGGGTCCTCAAATTATCGA CCCGAATGAATCGAGTTTTAATCGGGTCGACCCGACCCCCAAGGTTAGTGGTACTGGTAC TGTAAATGGGTTTCGCTTTGGGAGAAGTGACAATGTGAGCTTTGGTTTTTGTGCTGGTAA GAGTGATTCTACTTTCAATACGAATTTGGACAGTTTAGGTTCTAACAAGAGTGATGTGGC TGGGAATTCAGGGGCAATGTTGAACAATAAAAATGGAGAATCGTTTGAGAGTGTGGAGGG AATGGGAGGCTGTAGAATTGGAAAAAATGGTAAAGATGGTTTTGTTTTTGGTGCTAGGAA GATTGATTCTGATTTGGATTCATGTTTGGGGAATTTAGGTTTTGCTTTCGGAGCTAGTAA TACTAGTAGCTTCAAGTTTAGCTCGAAGAGCAAGCACGGTGATTGGACAAATAAGAGCAG CTCAGCATCCTATCTGAATGTGTCTAATAAGGAGCCTGAATGTAGCGAGAGCAATGGTAA TTCGAAGTCAAAAATGGAATTTGGACAGAGGAAGTGTAGTGGCAATGTTGGACAACCACA AGGGGTCAAGAATTGCTTGAGTGAGTCTTATAAAAATGGGCAGTCTAGTACATTGCAATC AGATAAATTGAATGCTAACTTTGTATTTGGTGCTAGTAAACCTAACTTTGATTCAGAAAA GGGAGCGTGTAATAAAGATGCAGCATACAGGGAACCAGAGTATCAGGGTCCAAAACTGAA TGACACATTTGTTTTTGGTTGTGGCTTCAAAGGGAAGAATAAAGTGAATGAAGATGGTAA AGTTGCTGAAGACATGGAGAATTTTAGCAGAGAAAAGATTCAAAACCACAATGGTTGTTG GAATGCCCCAAAAAGTGACACGGGTTGTGATGGGAAGCTCAAGTTTGATTCAAGTAGTAG AAATATTGTAGACACTGACTTCCCAAAAACCCCCATTTATAAACTCTCCGATGAGATGAA TTCATTAAACATTGGCCAGCCAGCACCGGTTAATGGTGCTGAGAAGATCAATGGTTTGAA TTCACGTGTCAACATTCAGAATGTATTTTTGTTTGAATTTAACCAAAGTACTTCAAATGT TTCAACTGAAAACGGTGCTTCTAATTCTTGTGATCTGCCCAAGGATGTCAATTTAAAAGA TCCTGTTAGTAGCTCTGGTTTTGATAAAGCTGATACAATTGATGGAGAATCAAATGCCAA GAGAGCTTGTGCATCTGAAATTGGTGAAAATTTTGCTAGTTCATTTAAGGGGGGCAAGGA CAAAAGGATCTCTGGAGATACAGTGCATACAAATTCTATGTTTGGTCTTTCGGGTGAGCA AATTAATTCATTTAGCTTTTCAGCAGGAATCTCTGGGAAAGAAAATAAGCCAATAAATTT TAACAGTGAGTTTGTAGTCTCGAGTGAATTGCCGCAGGATCGTCCAAGTAGTGACACGGA GAGGGATAATATACCCTTCCCATTATTTACCACAGAGATTTTTGGTTCACGGCACAAAGT TGACATCCCGGAAGCACCTTCTGGCCATCAAGAAGAAAAGAAAGAAGAATTCAGCTTTCC GAGAACACCATTTATGCCTGGGAAGTCCTTTTCTGATTTTAGTGCATCCAATTCAAGTAA ATCATTTTCTTTTACTGCTGATTTATTTTCCGGAGTGAATGAAAAATTGGGTTGTGGAAC AAGTAGCAGATTGAGGGACAAAAAAGTGAAAAAGAAGAAGTCATTGAGGCAAGAAACCTT GGTACAGAGGGTAGCTGGGCAGACTGATCTTTCTAATGGAAACAGTTCCACGCACAATGA TCAGTCTCCTGGATGTTGTTCACCTATGGATTTTTCACCATATCAGGATACAAATTCTTC TACTTCTGCTGATAATTTTACCAGGGCAACTGAAAGCAAGGGCGATGTGGCTGCTAACAA AGACACTCCTGTTTTCAATGACTCTCACAAGAAATGTGGAGAAGGAAATGAGAAATTTTC TGGAACTGATTCTGGAAAGGACTCTGATACTCGGAGAGATTTTAGTTCCTATACTTCACC TTCTGCTCAAGATGGGTTATCATCCATTAGACGTCAATATAGGAAAAAATACAAATTGAA AGTTGATAGTGGTTCAAACAACATAAATCGCAGAAAAGTTGAGTTTTCCACTGATGCAGT TCAACATTCTTCCTTTGGTTGCAAAACTTCAGGAGACATCCCAAGCGGAGTTACATCTCA TATGAGAAATAAATTTATACATGTGTCTAAAGTAGACGAAGACCATGGGATGCTGGGGCT CACTGACCGTGAAGTCTGTGAAAAGTGGCGGATCAGGGGAAATCAAGCCTATAAGGCTGG AAATCTTTTGCAAGCTGAGGATTTATACACTAAGGGTATCAAATCAGTCTCTGCTACAGA AATTTCAGGCTCTTGCCTGGATCCTCTTTTGTTATGCTACAGCAACCGAGCTGCCACTCG AATGTCACTTAGAAGGATGAGGGAAGCAATCAGTGATTGTGCATCTGCAGCTGCCTTCGA CCCTCACTTTCTAAAAGTAAAACTCAGAGCAGCAAATTGTTATCTGGTTCTTGGTGAGGT TGAAGAAGCAGTTAAGCATTACAACATTTGCTTGGAATCAAGAATTAATTTGTGCTTGGA TAGGAGAATTACAATTGAAGCAGCTGAAGGCTTGCAAAAAGCACAGAAAGTATCTGAACA TCTGCATCGGTGTGCCGATCTTTTGCAACAAAGAACTCCAGATGCAGCAAAAGATGCACT TGCAATTACCAATGAAACCTTGTCTATCAGCTGCTATTCAGAAAAGTTACTTGAAATGAA AGGAGAGGCTCTTTGCAAGCTACAGATGTATAATGAAGTGATTGAGCTGTGCGAAAGTTC TCTTGATATTGCTGAAAAGAACTTTACTTCTGACTTCATAAACTTAAATGATGTTGATAG CAAAAGCTCCTCTTTGATGCTTTGGAGATGTCTCCTTAAGTCCAGGGCGCACTTTCATCT TGGAAAGCTTGAGATGGCCCTTGACTTAATTGAGAAACAAGAGCATTTGGTTTCTGTTCA GAAAAGATCTGGAAACATGACCCAGGAATCATCATCTTCTCTAGCAGCCACTATCCATGA ACTTTTGCATCAAAAGAAAGCCGGAAATGAGGCATTTAAATCTGGCAAATATACGGAAGC TATTGAACATTATACTGCTGCTATATCCAGCAGTGTTGAGTCGCGCCCTTTTGCAGCTAT CTGTTTCTGCAATCGAGCTGCTGCTCACCAAGCTCTTGGTCAAATTGTTGATGCCATAGC AGATTGCAGTCTTGCCATTGCTCTTGACAAGAACTACACGAAGGCTGTTTCAAGGAGGGC TACCTTACATGAGATGATTAGAGACTATGGGCATGCTGTAAATGATCTTGAGAGGCTCAT ATCCCTTCAGGAAGCTCAATCTCAAGAAAGGATTCGACAATCTGAGGCGCTGGATAAGTC AAATGGAAGTAGTGCTAAAGAAGCAAAGCGAACTCGTCGGCAGCTTTCGACAATTCAGGA GAAGGCTAAAAGAGCAACGCCATTGGATCTTTATCTTATTTTGGGAATCAAGTCATCTGA TACAGAATCTGACATCAAGAAGGCATATAGGAAAGCAGCCCTCAGACATCATCCTGATAA GGCGGGTCAAATTTTGGCAAGGAGTGATGCCATGGATGATGGAGGGTTGTGGAAAGAGAT CTCTGATACTGTCCGCAATGATGCTGATAGGCTGTTCAAGTTGATTGGAGAAGCGTATGC AGTTCTCTCAAATTCCGACAAGCGTGCAAAACATGATTTAGAAGAAGAAATAAGGGATGT TCAAAGGGAAAGAGGGAGAAACAGCGGTTCTTGCAGACCTTCTGATTCTTATTCTTCTCC ATTTGAGAGGACGAACTGGTCACGAAGACAATCTAACTTTTACAGTTCTCCATTTGGTAA AAGTAGTAGTAAGCACTATGGACAAGAGTATTGGAGAACCTATGGAGAATCACATCCCAG ATGGTAAAAGGTATGCATGCATCTTCTATATATCTGTAGAATTAGTAGTGCCTACAGCCC TGATGATCAGATGGTTCTCGATTTCTCAATCCTTCTGAGTTCTGACTTGCGCCCCTATTA AACCAAGGTCGAAAAATTTGAAGATGAAGGATTCCTTGAAAAGTAAAGGATTAGTAATCC TTTTTAGAGATCAAATGGATTCGGTCTTTGAGCTATGTCACAGATTGGTGACCTGATCAT GCTAAGCAAGACACAAAATTCTATCTCAATGACCAGTTTGCCCCTGGACATTCTGCCAAG TTACATTTTTTTCCCCAAAGATGAAGCTTTTATTAGTTTGGCACCTGCTTGCCCAGTGGA GGTGTTGGAAAATTTAGCAAAAAAAGGGGGTTTTATTTTCTTCCATTTTTGCCTTTAGAG TGGACCTTCACCTTGGAGTTTTGATGGGCAAATTGTAAATTAGCCGAGTTTATCAGCATA TAAAAGGAATAAGATCAAGTTTTGCTTATGCATATATGCAAGTGGTTAATTTGTTATCAA CTACACGTATAATTTATTTCTTCCTTTATTAATATATGTTTTCTTG