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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g016380.3.1
CDS Infomation

Ribosome biogenesis protein brix, putative (AHRD V3.3 *** B9SUS1_RICCO)
Sequence

ATGGGAAAGAAGCGGAAGCACACAGAAACAGAGGCTGCGGCCATAGAAGAAACTGCAATA
GAAAGGCCTAAGAGAACTCTTTTAGGTTTTAAAGATGGTTCTACTGAAGAAAACAAAGAG
ACTTCAGTAGTTACTTTTAGAAATAAAGAGAAAGTTTTGGTGACTTGTTCTCGTCGTATT
AATTACAGGTATCGGCATTTAATGTTGAATTTGGTGTCCCTTTTGCCTCACTGTAAGAAG
GATAACAAGGTGGAGTCTAAAGATTCTAAAGGTGCAACGTTGAATGAGCTAGTTGAGTTG
AAGAGCTGTTCCTCTTGTTTGTTCTTTGAGTGCCGGAAGGGAAAAGACCTCTATCTTTGG
ATGGCGAAATGCCCCAATGGTCCATCCGTGAAGTTTTTAGTCAATGCAGTGCACACAATG
GAAGAATTAAAACTGACTGGAAATCATTTGAAGGGTTCACGCCCTATTTTGACTTTCTCA
AGCAATTTCGATAAACAGCCTCACTGGAAGCTTTTGAAAGAAATGTTCATACAGATTTTT
GGAACCCCAAAGGATCACCGGAAATCTAAACCTTTCTATGATCATGTAATTGTGTTTTCA
ATTCTTGATGACCACGTGTGGTTCCGTAATTACCAGATATCTTGTCCTCATAATGGAGCA
ACACAGAAAATAGACCGTGGGGACCTGGAAAAGATGACACTTGTTGAGGTTGGTCCAAGG
TTTTGCTTGAACCCAATTAAGATCTTTGGTGGTAGCTTTGGTGGCCCTACTCTTTATGAG
AACCCATTTTATGTTGCACCCAATCAGATCCGATCACTAGAGAAAAAACAGAAGGCTGGC
AAATATGCAAAGAAAGTCAAAGCAAAGGCCAGGAGAAAGATACATCAATTGTCTAATCCT
ATGGAGGTGGATGAATTTGCCGATATGTGGAAGGAGTGA

Peptide Sequence

PEP ID

Solyc04g016380.3.1
PEP Infomation

Ribosome biogenesis protein brix, putative (AHRD V3.3 *** B9SUS1_RICCO)
Sequence

MGKKRKHTETEAAAIEETAIERPKRTLLGFKDGSTEENKETSVVTFRNKEKVLVTCSRRI
NYRYRHLMLNLVSLLPHCKKDNKVESKDSKGATLNELVELKSCSSCLFFECRKGKDLYLW
MAKCPNGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKQPHWKLLKEMFIQIF
GTPKDHRKSKPFYDHVIVFSILDDHVWFRNYQISCPHNGATQKIDRGDLEKMTLVEVGPR
FCLNPIKIFGGSFGGPTLYENPFYVAPNQIRSLEKKQKAGKYAKKVKAKARRKIHQLSNP
MEVDEFADMWKE*

Transcript Sequence

Transcript ID

Solyc04g016380.3.1
Transcript Infomation

Ribosome biogenesis protein brix, putative (AHRD V3.3 *** B9SUS1_RICCO)
Sequence

TTAAACCCCTGCCGCTATTCTTTGTAAAGCAAATTCTTGAAGATTTTCCATGGGAAAGAA
GCGGAAGCACACAGAAACAGAGGCTGCGGCCATAGAAGAAACTGCAATAGAAAGGCCTAA
GAGAACTCTTTTAGGTTTTAAAGATGGTTCTACTGAAGAAAACAAAGAGACTTCAGTAGT
TACTTTTAGAAATAAAGAGAAAGTTTTGGTGACTTGTTCTCGTCGTATTAATTACAGGTA
TCGGCATTTAATGTTGAATTTGGTGTCCCTTTTGCCTCACTGTAAGAAGGATAACAAGGT
GGAGTCTAAAGATTCTAAAGGTGCAACGTTGAATGAGCTAGTTGAGTTGAAGAGCTGTTC
CTCTTGTTTGTTCTTTGAGTGCCGGAAGGGAAAAGACCTCTATCTTTGGATGGCGAAATG
CCCCAATGGTCCATCCGTGAAGTTTTTAGTCAATGCAGTGCACACAATGGAAGAATTAAA
ACTGACTGGAAATCATTTGAAGGGTTCACGCCCTATTTTGACTTTCTCAAGCAATTTCGA
TAAACAGCCTCACTGGAAGCTTTTGAAAGAAATGTTCATACAGATTTTTGGAACCCCAAA
GGATCACCGGAAATCTAAACCTTTCTATGATCATGTAATTGTGTTTTCAATTCTTGATGA
CCACGTGTGGTTCCGTAATTACCAGATATCTTGTCCTCATAATGGAGCAACACAGAAAAT
AGACCGTGGGGACCTGGAAAAGATGACACTTGTTGAGGTTGGTCCAAGGTTTTGCTTGAA
CCCAATTAAGATCTTTGGTGGTAGCTTTGGTGGCCCTACTCTTTATGAGAACCCATTTTA
TGTTGCACCCAATCAGATCCGATCACTAGAGAAAAAACAGAAGGCTGGCAAATATGCAAA
GAAAGTCAAAGCAAAGGCCAGGAGAAAGATACATCAATTGTCTAATCCTATGGAGGTGGA
TGAATTTGCCGATATGTGGAAGGAGTGACAAGTCGTTGGAAAACATGAATGGACTCCAGG
TCCAGGACAATTTTGTATTGCTAGAATTATGATCCTTTTCGAACATTTTGTAGTAAACTA
TGTCCTGGTTTTCTCCCCAATTAGAACACATTCTATGCAAAATCATAATAGGGCAGTGTA
AGAATGCCCCCTTCTTTTATGGTTGCTGCAATGAGTAGCTACATGCCTTGCCATTGTCAA
TTTTACTGCATTGTACTTCTTCCCAAGATTGTATTTTAAGGTTGTGTTAATCCACAGAAT
ACATCATGTAGTATTATTGGATTGGTTATGTCTTTTGGGCCCTGAATTTTTCGAAC