Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g016330.3.1
CDS Infomation

Glycerol-3-phosphate dehydrogenase [NAD(+)] (AHRD V3.3 *** K4BQD3_SOLLC)
Sequence

ATGGTTGGTAGTATTGAAGTGAAAAGTGGTAATAGTGTATACTCAAATGGGAGTGTACAC
AACCACAATGGTCCAGAGGAGAAACTTGATGAGCTTAGGCATATTCTTGGTAAATCTGAT
GGTGATTTGTTGAGGATTGTTTGTGTTGGAGCTGGTGCTTGGGGCAGTGTTTTTGCAGCT
TTGTTGCAAGATAGTTATGGTCAATTTCGCGATAAGGTTCAAATTAGGATATGGAGAAGG
TCAGGGAGAGCTGTTGATAGAGCCACAGCCGAACATTTATTTGAAGTGATCAATTCAAGG
GAGGATGTGTTGAGAAGGTTGATAAGGAGATGTGCATATCTGAAGTACGTCGAGGCTAGA
TTAGGCGATCGGACATTGTATGCTGATGAAATCTTGAAAGATGGTTTCTGCTTAAATATG
ATTGATACACCATTTTGTCCATTGAAAGTTGTGACCAACTTGCAAGAAGCTGTGTGGGAT
GCTGATCTTGTGATTAATGGATTGCCCTCGACTGAAACACGCGAAGTCTTTAAGGAGATC
AGCAAGTATTGGAAGGAAAGATTAACTGTACCAATCATCATTTCACTGGCAAAGGGTATA
GAGGCTGAACTAGATCCAGTTCCTCATATTATTACTCCTACGCAGATGATTAATCGGGCA
ACTGGAGTACCAGTTGAGAATATCCTTTATCTTGGTGGACCAAATATTGCATCGGAGATT
TACAACAAAGAATATGCTAATGCTAGGATTTGTGGATCAGAAAAATGGAGAAAACCACTT
GCAAAGTTCCTTAGGCAACCTCATTTCATTGTATGGGACAACAGCGACCTAGTAACTCAC
GAAGTCATGGGAGGTTTGAAGAACGTCTACGCCATTGGAGCTGGGATGGTAGCTGCACTA
ACAAATGAGAGTGCTACCAGCAAATCAGTATATTTTGCACATTGTACATCGGAGATGATA
TTCATCACGTATTTATTGACTGAAGAACCAGAAAGGCTTGCAGGGCCTCTTCTAGCTGAT
ACATATGTTACATTGTTGAAAGGTCGTAACTCATGGTATGGTCAAATGATAGCTAAGGGA
GAACTGAGTCTCGATATGGGTGATAGCATTAGTGGCAAAGGAACAATCCAGGGAGTTTCT
GCTGTCGAAGCATTCTATGAACTTCTAAGTCAGTCAAGTTTGAATGTGTTACATCCCGGA
GATAATAAGCCGGTTGCCCCAGTTGAGCTGTGCCCTATCCTGAAGACTTTATACAAGATA
CTCATAAAAAGAGAACAAGGGACAATGGCTATTCTTCAGGCATTGAGGGATGAAAACTTG
AACGATCCGCGCGATCGGATTGAGATTGCACAAAGTCATGCTTTTTACAGGCCTTCACTT
CTTGGACAACCTTGA

Peptide Sequence

PEP ID

Solyc04g016330.3.1
PEP Infomation

Glycerol-3-phosphate dehydrogenase [NAD(+)] (AHRD V3.3 *** K4BQD3_SOLLC)
Sequence

MVGSIEVKSGNSVYSNGSVHNHNGPEEKLDELRHILGKSDGDLLRIVCVGAGAWGSVFAA
LLQDSYGQFRDKVQIRIWRRSGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR
LGDRTLYADEILKDGFCLNMIDTPFCPLKVVTNLQEAVWDADLVINGLPSTETREVFKEI
SKYWKERLTVPIIISLAKGIEAELDPVPHIITPTQMINRATGVPVENILYLGGPNIASEI
YNKEYANARICGSEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAAL
TNESATSKSVYFAHCTSEMIFITYLLTEEPERLAGPLLADTYVTLLKGRNSWYGQMIAKG
ELSLDMGDSISGKGTIQGVSAVEAFYELLSQSSLNVLHPGDNKPVAPVELCPILKTLYKI
LIKREQGTMAILQALRDENLNDPRDRIEIAQSHAFYRPSLLGQP*

Transcript Sequence

Transcript ID

Solyc04g016330.3.1
Transcript Infomation

Glycerol-3-phosphate dehydrogenase [NAD(+)] (AHRD V3.3 *** K4BQD3_SOLLC)
Sequence

ATTGTCAAATAAAAAAGTGATCTTTAACCTTCATGGTCTCATGGAACTATTTTCATGAGT
TGGGTCATCTTTTTTTTGTTTCAAGATTGTACATTTTGCATACAATTCTTGTTTTTTTAA
AAAAACTTAAATGTGTGTAAAAGCAACAGTTTCAGCTTAAAAATTGAATCTTTATACTGT
TTGACACGTAAAGGTTTGTTCTTTTTTCAACTCTTTTCTTTATTGTTTGTCAAAAATTGT
CTGTTGGGTAGATAAACCAAAATTAGGCGGACACTACAAAGCTGTCAGCAAAATCAAGAT
TTACAAAATTAGTAGGCTTTGTCAGCTTCTTTTATTGCTTCGGAAGTGGAGAAAATGAAG
AAAAATTGTTTAAAGAATTGGTGGATTTGAGTTGAAAAAGTGAGGAAAGAGAAAAGTTAG
TAGTTTTGATTTAGGTAAAAGATTCTACTTGTAAAAGGGTTCTCCTCTTTTTTTTCTGGT
TTATCATAGCTTGGAAGGAAGTGGAAAATTGAGGAAGTTTTCAAGAATTTAGTTAATGTG
GGAGATGAGCTAAGTCAAGAAAATTATTTAATGTTTGAAATGTGCTTTGCTTAATATATT
ACTACCAATAAGGGGTTTTTCTCTTATGCTTAAAAGGGTTGTTTTTCTTCAAGTTCTTGA
AATAGTTTGTTAAAAAGTGTAGTTTGTTCATTGATTAAGACAAATTCTGCAGAGTTTATG
ATCATTGGGGGTTGAAAGATTCTTCTTTTATATAGTACATTTTGAGGTGTTTAGATTGTC
TTTTGTGGGGTTCTTTCTCTTCAAATTTTTGAAATAATTTAGCTAAAGTGTAGCTTGTTC
ATTGGTTGAGACAAATTCTGCAGACTTTGTGATATTGGGTTTAAAAGATTCTCCTTTTAT
CTACTTTTTGAGGTGTTTAGATTGTCAAGATTTGTGGGGTTCTATAATTGGAGTTTTTTT
TTTTTTGAACTTGAAAGAAAATGGTTGGTAGTATTGAAGTGAAAAGTGGTAATAGTGTAT
ACTCAAATGGGAGTGTACACAACCACAATGGTCCAGAGGAGAAACTTGATGAGCTTAGGC
ATATTCTTGGTAAATCTGATGGTGATTTGTTGAGGATTGTTTGTGTTGGAGCTGGTGCTT
GGGGCAGTGTTTTTGCAGCTTTGTTGCAAGATAGTTATGGTCAATTTCGCGATAAGGTTC
AAATTAGGATATGGAGAAGGTCAGGGAGAGCTGTTGATAGAGCCACAGCCGAACATTTAT
TTGAAGTGATCAATTCAAGGGAGGATGTGTTGAGAAGGTTGATAAGGAGATGTGCATATC
TGAAGTACGTCGAGGCTAGATTAGGCGATCGGACATTGTATGCTGATGAAATCTTGAAAG
ATGGTTTCTGCTTAAATATGATTGATACACCATTTTGTCCATTGAAAGTTGTGACCAACT
TGCAAGAAGCTGTGTGGGATGCTGATCTTGTGATTAATGGATTGCCCTCGACTGAAACAC
GCGAAGTCTTTAAGGAGATCAGCAAGTATTGGAAGGAAAGATTAACTGTACCAATCATCA
TTTCACTGGCAAAGGGTATAGAGGCTGAACTAGATCCAGTTCCTCATATTATTACTCCTA
CGCAGATGATTAATCGGGCAACTGGAGTACCAGTTGAGAATATCCTTTATCTTGGTGGAC
CAAATATTGCATCGGAGATTTACAACAAAGAATATGCTAATGCTAGGATTTGTGGATCAG
AAAAATGGAGAAAACCACTTGCAAAGTTCCTTAGGCAACCTCATTTCATTGTATGGGACA
ACAGCGACCTAGTAACTCACGAAGTCATGGGAGGTTTGAAGAACGTCTACGCCATTGGAG
CTGGGATGGTAGCTGCACTAACAAATGAGAGTGCTACCAGCAAATCAGTATATTTTGCAC
ATTGTACATCGGAGATGATATTCATCACGTATTTATTGACTGAAGAACCAGAAAGGCTTG
CAGGGCCTCTTCTAGCTGATACATATGTTACATTGTTGAAAGGTCGTAACTCATGGTATG
GTCAAATGATAGCTAAGGGAGAACTGAGTCTCGATATGGGTGATAGCATTAGTGGCAAAG
GAACAATCCAGGGAGTTTCTGCTGTCGAAGCATTCTATGAACTTCTAAGTCAGTCAAGTT
TGAATGTGTTACATCCCGGAGATAATAAGCCGGTTGCCCCAGTTGAGCTGTGCCCTATCC
TGAAGACTTTATACAAGATACTCATAAAAAGAGAACAAGGGACAATGGCTATTCTTCAGG
CATTGAGGGATGAAAACTTGAACGATCCGCGCGATCGGATTGAGATTGCACAAAGTCATG
CTTTTTACAGGCCTTCACTTCTTGGACAACCTTGATCAACAATTTATGCACAACATTTTT
AGTATTTAAAGCAATGAATAAGTGTATAGAGTGGTTCAAATTGGATGGATTGTTTTGTGT
GGTGAAGAAAACATACATTTCATACTCAAATTTGTATTGATGAACATCTTGATATTCATT
TGAACTTAAAGCCTATTGTATGCTTTGTTCTTTCCATAAGCCATTTTAAACTTATTCAAT
ACAAGTATGTTGTGGTTTTTTTCTC