Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g014870.3.1
CDS Infomation	RNA-dependent RNA polymerase6a
Sequence	ATGGGATCAGAGGGTTCTGAAAAGAATCTCGTAGTGACTCAAATTAGTGTTGGTGGGTTC AGCAATGATGTCAATGCGAAAATGCTTTCAGAATATCTGGAAGAACAAGTTGGACAAGTG TGGAGGTGTAGATTAAAGACTTCATCCACTCCTCCTGACTCTTACCCGACTTATGACATT GATGTAGAGAAAGTGCGAAGAATGAACAATTACATAAAAGTGGAACCTCATGCATTCGTT CATTTTGCATCTTCAGAGTCCGCACAGAATGCTCTTGCTGCTGCTAGGCGTGATGAACTC TTCTTAGAAGAGAAGCCTTTGAAGGTTAGTTTGGGTCCTGAGAATACCTTTAATATGAAT GAGAGGAGAAGAACTTTCATGCCTTATAAGTTTTCGGACGTTGGTGTAGAAATTGGAGTA CTGGTTAGTAATGATGACTTTGTGGTTGGTTGGAGGGGACCTCATTCTGGTGTTAACTTT CTTGTGGATCCATTCAATGGGAAATGCAAAATACTTTTCACAAGGGATACTGCTTTCTGT TTCAAGGGTGAAGGAAAGCATGCAGTTATAAAGTGCAATTTCAAGATTGAGTTTTTGCTG AGGGAAATCAATGAGATAAACGAATGCAAAGACTTTTCATCTTTGGTATTATTGTTGCAG CTGGCGTCATCTCCATTGGTTTTCTATAGAACTGCTGATGATGACATTGAAGAATCAGTT GCTTTTGACTTATTAGATGACGATGATCAGTGGATCCGAACCACAGATATTACATTTAGT GGAGCCATTGGTAGGTTTAATACCTACCGTGTTTCAATTCGACCTCGCAATGGTCCTAGC TTTAAGAAGGCCATGAACTATTTCAGAGAAAGTAGGGTGCCTGTGGTAGAACAGGGTGAG CAGATGCTCCGGGTGAGAAATGAGCCGGATTTTGGGGAGTCCGTCTCAGAACCTTTCTTC TGCTTTCAAAACCATGAAGGTATAAGCTTTAAGGTCTTGTTTCTGGTAAATGCGGTTTTG CACAAAGGCATAGTTAATCAGCATCAGATGACTGCTGAATTCTTTTCTTTGCTTAGAAAG CATCAGGAGGGAGTAAATTTAGCTGCACTGAAGCACATCTTTTCTTACAAAAGGCCTGTC AATGATGCTATTCGGAAGTTAGCAAGTGTACAGAAATGGCTATTTAATAATCCTAACCTT CTCGAGAGAACTGGACAGTTGGATGATGTTGTAGAGGTTAGAAGGTTGGTTATTACCCCA ACCAAAGCATACTGTCTTCCGCCAACTGTGGAGCTATCCAATAGAGTCCTCAGGAAGTAT AAGCATATTTCAGATCGATTTTTGCGAGTTACTTTTATGGATGAGGGCATGCGTAACCTG AACAGGAATGCTCTGACATACTATGCAGCTAATATTGTGAGAGAAATTACATCAAGTTCT AATCCCCAGAGAACTGGAATCTTCCAAAGGGTGAAAATTATTGTGAATAAAGGATTTTAT CTGTGTGGTCGAAGGTATTCTTTTTTGGCTTTTTCAGCTAACCAGCTGAGGGATCGTTCT GCCTGGTTTTTTGCTGAAACCCCGGAAATTAGGGTGACCAGCATCATAAACTGGATGGGT AAGTTCGGTAACAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACAGTGCTTTTCATCA ACCTATGCAACAGTGGAAGTCCTTCCAAGCGAGGTTAACTCCGAGCTTCCAGATATAGAA AGAAATGGGTATGTTTTCTCTGATGGAATCGGCATGATGACAGCAGATCTATCTATAGAA GTTGCAGCGAAGTTGCAATTAAGTGTCAATCCTCCTTGTGCTTATCAGATAAGGTATGCT GGTTGTAAAGGTGTTGTTGCATGTTGGCCGGCGGAGAAAGATGGTATCCGCCTTTCTCTG AGACCAAGTATGAAGAAATTTGACTCAAATCACACTATCCTTGAAATCTGCTCTTGGACG AGATTACAGCCTGGTTTTCTGAACCGGCAAATAATAACCTTGCTCTCATCCTTGGAAGTT AAAGATGAAATGTTTTGGGAAATGCAGAAAGAAATGTTATCAAAGTTGGATAAGATACTT GTGGATTCGGACGTGGCTTTTGATGTGATTACAGCTTCATGTGCCGAGGCAGGAAATACA GCGGCTATAATGTTGAGTGCAGGGTTTAAACCTCAAAGTGAACCTCATTTGAGAGGGATG TTGGCTAGCATTAGAGCTGCTCAGCTTGGCGACCTCAGGAATAAGACAAGGATGTTTGTT ACTTCAGGAAGGTGGTTGATGGGCTGTTTGGATGAATTAGGTGAACTTGAGCAAGGCCAA TGCTTTATTCAAGTGTCAAGCCCTTCTTTGGAGACCTGTTTTGTTAAGCATGGTCCAGAG TTTTCTGAAATCAAGAAAAATCTTCAAGTAGTAAAGGGCCTTGTTGTAATTGCAAAGAAC CCGTGTCTTCATCCCGGGGATGTGAGGATTCTGGAGGCTGTAGATGTTCCTGGTTTACAC CATCTCTATGATTGTCTGGTCTTCCCTCAGAAAGGGGATAGGCCACATTCAAATGAAGCA TCAGGGAGTGACCTTGATGGTGATCTCTACTTTGTGACTTGGGATGAAAATCTCATTCCA CCCAGTAAGAAAAGCTGGATGCCAATGGCCTATGCACCTGCAGAAGCCAAACAGTTGGGT CGTCAAGTTCAACATACGGACATAATAGATTTTTTCTTAAAGAACATGGTCCAAGAGAGT CTAGGAGAAATCTGCAACGCACATGTGGTTCATGCTGACCTCAGTGAATTTGGAGCTATG GATGAGAAGTGCCTTAAATTGGCAGAACTTGCTGCTCTAGCCGTTGATTTCCCCAAAACT GGAAAACTTGTCACCATGCCATTTGACCTCAAACCAAAAATGTATCCCGACTTCATGGGG AAAGAGCCGTTTCAATCATACGAGTCAAAGAAAATTTTGGGTAAATTATATAGGCAAGTG ATAGATGTATATGATGCAGAGGGTGGAGAATCTTCTGGACTTGAGTATGTCCCTAAAGAC ATCCCATATGACACTAATCTTGAGATTCCGGGATACGAAGATTTCATAGATGATGCATGG AACCACAAATGTTCTTATGATGGTCAGTTGAATGGTCTTCTAGGACAATACAAAGTAAAC GGGGAGGAAGAGGTGGTTACTGGACATATATGGTCCATGCCAAAGTACAGTGCTAAGAAG CAAGGGGAATTAAAAGAGAGGCTGAAACACGCATATAATATGTTGAGGAAGGAGTTCAGG AATGTTTTCGAGCAAATGGAGCCTGATTTTGATCTGCTTCCCATTGATGAGAAGAATGAT ATGTATGAAAGAAAGGCATTTGCGTGGTATCGGGTCACCTACCATCCTCATTGGGTGACT AGATCACTAGAGCTGCAATTGCCAGATGCTGTTTCAAATGGTGTTATGTTAAGTTTTGCT TGGATTGCAGCAGATTACATTGCTCGAATTAAAATTAGACAACGGGGAATGCAAAATTTT GACTCTACCAAGCCTATCGATTCTCTTGGAAGGTACCTTGTTAACAAGATATAA

Peptide Sequence

PEP ID	Solyc04g014870.3.1
PEP Infomation	RNA-dependent RNA polymerase6a
Sequence	MGSEGSEKNLVVTQISVGGFSNDVNAKMLSEYLEEQVGQVWRCRLKTSSTPPDSYPTYDI DVEKVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFNMN ERRRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGKCKILFTRDTAFC FKGEGKHAVIKCNFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESV AFDLLDDDDQWIRTTDITFSGAIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVVEQGE QMLRVRNEPDFGESVSEPFFCFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLRK HQEGVNLAALKHIFSYKRPVNDAIRKLASVQKWLFNNPNLLERTGQLDDVVEVRRLVITP TKAYCLPPTVELSNRVLRKYKHISDRFLRVTFMDEGMRNLNRNALTYYAANIVREITSSS NPQRTGIFQRVKIIVNKGFYLCGRRYSFLAFSANQLRDRSAWFFAETPEIRVTSIINWMG KFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMTADLSIE VAAKLQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWT RLQPGFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNT AAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTRMFVTSGRWLMGCLDELGELEQGQ CFIQVSSPSLETCFVKHGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLH HLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLG RQVQHTDIIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKT GKLVTMPFDLKPKMYPDFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEYVPKD IPYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKK QGELKERLKHAYNMLRKEFRNVFEQMEPDFDLLPIDEKNDMYERKAFAWYRVTYHPHWVT RSLELQLPDAVSNGVMLSFAWIAADYIARIKIRQRGMQNFDSTKPIDSLGRYLVNKI*

Transcript Sequence

Transcript ID	Solyc04g014870.3.1
Transcript Infomation	RNA-dependent RNA polymerase6a
Sequence	AGCGCTAATGTTATCTCTGCACGATTTAATTTTACTTAAATTTTAAAAAAAATTATGTCA TTTTTATCCTCAGTTTCATCGCTATATTTATTTATTGTTTTCTTTTTAAATTTTACTACG ACGCAAAACATGAACAAATTTCCTAGTGTCATAAAATTGCTAAAGATAATATAATCTGTT TACACTTTGCATTTGTAGAAATACTTTATAATACGATTCAATACATTAGGAAACATTAGA GAACAACAATTGAGATCCCAACAAAATATATAAATGAAATTAAATAAATAACGGAGAAAA TGGTAGCATCCTTGTCGCGTGAAATCCCTTACCCAGCCCCCTAGTACACTGTAACTGCAA GTGCTTCTTGAAGAAGCAAAAGATACACACCCTTATTGTTCTGATTTCTTGTATTTGTGT ATTTGATCAATCAGTTCAGAAAGGTGAACTTGGAGGCTGTGTGAATAAGTGAGTCCAAAA GTCTGTGTGACTCCTTCAAGGAAAAGATGGGATCAGAGGGTTCTGAAAAGAATCTCGTAG TGACTCAAATTAGTGTTGGTGGGTTCAGCAATGATGTCAATGCGAAAATGCTTTCAGAAT ATCTGGAAGAACAAGTTGGACAAGTGTGGAGGTGTAGATTAAAGACTTCATCCACTCCTC CTGACTCTTACCCGACTTATGACATTGATGTAGAGAAAGTGCGAAGAATGAACAATTACA TAAAAGTGGAACCTCATGCATTCGTTCATTTTGCATCTTCAGAGTCCGCACAGAATGCTC TTGCTGCTGCTAGGCGTGATGAACTCTTCTTAGAAGAGAAGCCTTTGAAGGTTAGTTTGG GTCCTGAGAATACCTTTAATATGAATGAGAGGAGAAGAACTTTCATGCCTTATAAGTTTT CGGACGTTGGTGTAGAAATTGGAGTACTGGTTAGTAATGATGACTTTGTGGTTGGTTGGA GGGGACCTCATTCTGGTGTTAACTTTCTTGTGGATCCATTCAATGGGAAATGCAAAATAC TTTTCACAAGGGATACTGCTTTCTGTTTCAAGGGTGAAGGAAAGCATGCAGTTATAAAGT GCAATTTCAAGATTGAGTTTTTGCTGAGGGAAATCAATGAGATAAACGAATGCAAAGACT TTTCATCTTTGGTATTATTGTTGCAGCTGGCGTCATCTCCATTGGTTTTCTATAGAACTG CTGATGATGACATTGAAGAATCAGTTGCTTTTGACTTATTAGATGACGATGATCAGTGGA TCCGAACCACAGATATTACATTTAGTGGAGCCATTGGTAGGTTTAATACCTACCGTGTTT CAATTCGACCTCGCAATGGTCCTAGCTTTAAGAAGGCCATGAACTATTTCAGAGAAAGTA GGGTGCCTGTGGTAGAACAGGGTGAGCAGATGCTCCGGGTGAGAAATGAGCCGGATTTTG GGGAGTCCGTCTCAGAACCTTTCTTCTGCTTTCAAAACCATGAAGGTATAAGCTTTAAGG TCTTGTTTCTGGTAAATGCGGTTTTGCACAAAGGCATAGTTAATCAGCATCAGATGACTG CTGAATTCTTTTCTTTGCTTAGAAAGCATCAGGAGGGAGTAAATTTAGCTGCACTGAAGC ACATCTTTTCTTACAAAAGGCCTGTCAATGATGCTATTCGGAAGTTAGCAAGTGTACAGA AATGGCTATTTAATAATCCTAACCTTCTCGAGAGAACTGGACAGTTGGATGATGTTGTAG AGGTTAGAAGGTTGGTTATTACCCCAACCAAAGCATACTGTCTTCCGCCAACTGTGGAGC TATCCAATAGAGTCCTCAGGAAGTATAAGCATATTTCAGATCGATTTTTGCGAGTTACTT TTATGGATGAGGGCATGCGTAACCTGAACAGGAATGCTCTGACATACTATGCAGCTAATA TTGTGAGAGAAATTACATCAAGTTCTAATCCCCAGAGAACTGGAATCTTCCAAAGGGTGA AAATTATTGTGAATAAAGGATTTTATCTGTGTGGTCGAAGGTATTCTTTTTTGGCTTTTT CAGCTAACCAGCTGAGGGATCGTTCTGCCTGGTTTTTTGCTGAAACCCCGGAAATTAGGG TGACCAGCATCATAAACTGGATGGGTAAGTTCGGTAACAGGAATGTTGCAAAATGTGCTG CTAGGATGGGACAGTGCTTTTCATCAACCTATGCAACAGTGGAAGTCCTTCCAAGCGAGG TTAACTCCGAGCTTCCAGATATAGAAAGAAATGGGTATGTTTTCTCTGATGGAATCGGCA TGATGACAGCAGATCTATCTATAGAAGTTGCAGCGAAGTTGCAATTAAGTGTCAATCCTC CTTGTGCTTATCAGATAAGGTATGCTGGTTGTAAAGGTGTTGTTGCATGTTGGCCGGCGG AGAAAGATGGTATCCGCCTTTCTCTGAGACCAAGTATGAAGAAATTTGACTCAAATCACA CTATCCTTGAAATCTGCTCTTGGACGAGATTACAGCCTGGTTTTCTGAACCGGCAAATAA TAACCTTGCTCTCATCCTTGGAAGTTAAAGATGAAATGTTTTGGGAAATGCAGAAAGAAA TGTTATCAAAGTTGGATAAGATACTTGTGGATTCGGACGTGGCTTTTGATGTGATTACAG CTTCATGTGCCGAGGCAGGAAATACAGCGGCTATAATGTTGAGTGCAGGGTTTAAACCTC AAAGTGAACCTCATTTGAGAGGGATGTTGGCTAGCATTAGAGCTGCTCAGCTTGGCGACC TCAGGAATAAGACAAGGATGTTTGTTACTTCAGGAAGGTGGTTGATGGGCTGTTTGGATG AATTAGGTGAACTTGAGCAAGGCCAATGCTTTATTCAAGTGTCAAGCCCTTCTTTGGAGA CCTGTTTTGTTAAGCATGGTCCAGAGTTTTCTGAAATCAAGAAAAATCTTCAAGTAGTAA AGGGCCTTGTTGTAATTGCAAAGAACCCGTGTCTTCATCCCGGGGATGTGAGGATTCTGG AGGCTGTAGATGTTCCTGGTTTACACCATCTCTATGATTGTCTGGTCTTCCCTCAGAAAG GGGATAGGCCACATTCAAATGAAGCATCAGGGAGTGACCTTGATGGTGATCTCTACTTTG TGACTTGGGATGAAAATCTCATTCCACCCAGTAAGAAAAGCTGGATGCCAATGGCCTATG CACCTGCAGAAGCCAAACAGTTGGGTCGTCAAGTTCAACATACGGACATAATAGATTTTT TCTTAAAGAACATGGTCCAAGAGAGTCTAGGAGAAATCTGCAACGCACATGTGGTTCATG CTGACCTCAGTGAATTTGGAGCTATGGATGAGAAGTGCCTTAAATTGGCAGAACTTGCTG CTCTAGCCGTTGATTTCCCCAAAACTGGAAAACTTGTCACCATGCCATTTGACCTCAAAC CAAAAATGTATCCCGACTTCATGGGGAAAGAGCCGTTTCAATCATACGAGTCAAAGAAAA TTTTGGGTAAATTATATAGGCAAGTGATAGATGTATATGATGCAGAGGGTGGAGAATCTT CTGGACTTGAGTATGTCCCTAAAGACATCCCATATGACACTAATCTTGAGATTCCGGGAT ACGAAGATTTCATAGATGATGCATGGAACCACAAATGTTCTTATGATGGTCAGTTGAATG GTCTTCTAGGACAATACAAAGTAAACGGGGAGGAAGAGGTGGTTACTGGACATATATGGT CCATGCCAAAGTACAGTGCTAAGAAGCAAGGGGAATTAAAAGAGAGGCTGAAACACGCAT ATAATATGTTGAGGAAGGAGTTCAGGAATGTTTTCGAGCAAATGGAGCCTGATTTTGATC TGCTTCCCATTGATGAGAAGAATGATATGTATGAAAGAAAGGCATTTGCGTGGTATCGGG TCACCTACCATCCTCATTGGGTGACTAGATCACTAGAGCTGCAATTGCCAGATGCTGTTT CAAATGGTGTTATGTTAAGTTTTGCTTGGATTGCAGCAGATTACATTGCTCGAATTAAAA TTAGACAACGGGGAATGCAAAATTTTGACTCTACCAAGCCTATCGATTCTCTTGGAAGGT ACCTTGTTAACAAGATATAACAGCCAAAACTGTCATGCGGTTAAATGCAAATCTATTGGC TTCTTATCAGCTATTTGGCTGTAAGGCCACTCTGCCATTATCAATACCTGGTTTGATGTC CTTCCGAACCTCCTTAATCCTACTATTGGATTGTTTCCTTGTGTGATCAGTTATTATATG AAATGTCGTCCAGGAGTTTGCCTGCTGATCGATGAAAATCTTCTCTTTTCATCATTGCTG TTTTCTGGTTTGTAGTATATGTCATATCCTCGCTACTAGTTTGTATCTGTTGTTGTTGCT GCTGTAGAGGATGTTATGGTTACTCTCGAACTGCTTATGTACTTTCTCTTACTTTTTTCG TGGTTGGTCCCTAACCTCTGTAATCTATTGATTTCGGACAATGGAGACCAGAAATGTGAG TGGTGAAGTTGAACTTAGCATTGCCACACATGTGTATTGACATTTTTCAGTCCAAGAAAA CAAAGAGTGAATATA