Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g014830.2.1
CDS Infomation

GRAS family transcription factor (AHRD V3.3 *** G7JLR5_MEDTR)
Sequence

ATGGGAAATTTTGCTGGCTCTAACATTTGCTTCGGCAGTGTACTGGAGATATCCGTTCTA
GCTCAAATGCAAGCATCTCAGGGACCTCAAAGGTCGTGTAGTGTACATAAATTGTACAAT
AAGCCAATGCAGCAAGTTCAGCAAAACTACACCCCTTGCCGTGCTTCTGACAACAGCAAT
TATAATGATGGTAGCAACTCCCAGGCACAGGTTTCTTTAACGACAGAGAATGAGAAGTTC
TTCACTGTGGACACATTTCCGGCTACTGACTGTGCCATCTACGATGGAGATCCTTCCGTA
AGCGTCTCTTCCAACAGGAGTCCTTTCTCTTCTCAATGTTCTCAGTCGAACATGTTTGAG
CAACGTCGTTCTTACGAGAAAACTGCTGGTTCACCTGTAAGTTTGTGTTCAGGAGTTGAT
GACAGCAACGGGAAGAAGCATGAGCTGCGGGAACTGAATAATAAGTTGCTAAGGCCTGAA
TCCGATATTGATGACAGCTGCAGTTGCTCATTAAATGGTGTAGTCTCAAAACATTTTTCC
TTGACAAGGCGGAATCAAGTATTGGACGTAGCCTCAAGATTGGACTTGAAAGAGTTGCTT
GTTGCCTGTGCTGAAGCAGTAGATGAAGCTGATACCTCGACTGCAGAAGTTCTGATGGAT
GCTTTGGAGAAAAGGGTATCGGTTTATGGGGAACCTATGCAACGACTGAGTGCATACATG
TTGGAAGGTCTAAGAGCACGATTATTGTCCTCCGGGAGTAACATATACAAAAAACTGAAG
TGCAATGAACCAACTAGCTCAGAATTGTTGTCCTACATGCAAGTCCTGTATCACATCACC
CCTTACTTCAAGTTCGCTTATATGTCCGCCAATGTTGTCATAAGCGAAGCCATGAAGAAT
GAGAATAGAATCCATATCATTGATTTTCAAATTGCACAGGGAAGTCAATGGGTGTTCCTC
ATCCACTATCTGGCTCGTCGGCCTGGTGGTCCGCCATTTCTTCGCATCACAGGCATTGAT
GATTCCCAATCAGCTCATGCACGCGGTGGTGGACTTCAGCTAGTTGGCGAAAGGTTAGCG
AGCATTGCCAAGTCCTGCGGAGTGCCTTTCGAATTCCATACTGCTGCATTGTCAGGCTGT
ATGGTCAAACTAGAGAACCTAAGAGTTAGACATGGAGAAAGCCTGGCAGTTAACTTCCCT
TACATGTTGCACCACATGCCAGACGAGAGCGTAAGCACTATGAACCATCGGGACCGCCTA
TTAAGACTAGTCAAGAGCTTGTCTCCCAAAATCGTGGCCTTAGTTGAACAAGAAATGAAC
ACCAATACCGCCCCTTTCCTTCCAAGGTTCCGTGAAACTCTAGATTACCACAAAGCAATA
TTCGAATCAGTCGATGTAACTCGCCCGAGGAATGACATGCAACGGATCAGATCAGAGGAG
CATTGTATTGCACGGGATGTTGTCAATCTCATAGCATGTGAAGGGGCTGATAGAGTGGAA
AGGCATGAAGTTTTTGGCAAGTGGAGGTCAAGACTTTTGATGGCTGGATTTACTCCATGC
CCGCTGAGTCCATCGGTTGCTGAGGCCATTAAGGTCATGTTGAAGGAGTATAGCTCAAAT
TATAAGCTTGCTGAAAGCCAGGGGGCGCTTTATATTGGATGGAACAACAGAGCTTTAGCA
ACTTCTTCTGCTTGGCAATTACCTCATTCGCTGCCTTTGGGATCTTGA

Peptide Sequence

PEP ID

Solyc04g014830.2.1
PEP Infomation

GRAS family transcription factor (AHRD V3.3 *** G7JLR5_MEDTR)
Sequence

MGNFAGSNICFGSVLEISVLAQMQASQGPQRSCSVHKLYNKPMQQVQQNYTPCRASDNSN
YNDGSNSQAQVSLTTENEKFFTVDTFPATDCAIYDGDPSVSVSSNRSPFSSQCSQSNMFE
QRRSYEKTAGSPVSLCSGVDDSNGKKHELRELNNKLLRPESDIDDSCSCSLNGVVSKHFS
LTRRNQVLDVASRLDLKELLVACAEAVDEADTSTAEVLMDALEKRVSVYGEPMQRLSAYM
LEGLRARLLSSGSNIYKKLKCNEPTSSELLSYMQVLYHITPYFKFAYMSANVVISEAMKN
ENRIHIIDFQIAQGSQWVFLIHYLARRPGGPPFLRITGIDDSQSAHARGGGLQLVGERLA
SIAKSCGVPFEFHTAALSGCMVKLENLRVRHGESLAVNFPYMLHHMPDESVSTMNHRDRL
LRLVKSLSPKIVALVEQEMNTNTAPFLPRFRETLDYHKAIFESVDVTRPRNDMQRIRSEE
HCIARDVVNLIACEGADRVERHEVFGKWRSRLLMAGFTPCPLSPSVAEAIKVMLKEYSSN
YKLAESQGALYIGWNNRALATSSAWQLPHSLPLGS*

Transcript Sequence

Transcript ID

Solyc04g014830.2.1
Transcript Infomation

GRAS family transcription factor (AHRD V3.3 *** G7JLR5_MEDTR)
Sequence

ATGGGAAATTTTGCTGGCTCTAACATTTGCTTCGGCAGTGTACTGGAGATATCCGTTCTA
GCTCAAATGCAAGCATCTCAGGGACCTCAAAGGTCGTGTAGTGTACATAAATTGTACAAT
AAGCCAATGCAGCAAGTTCAGCAAAACTACACCCCTTGCCGTGCTTCTGACAACAGCAAT
TATAATGATGGTAGCAACTCCCAGGCACAGGTTTCTTTAACGACAGAGAATGAGAAGTTC
TTCACTGTGGACACATTTCCGGCTACTGACTGTGCCATCTACGATGGAGATCCTTCCGTA
AGCGTCTCTTCCAACAGGAGTCCTTTCTCTTCTCAATGTTCTCAGTCGAACATGTTTGAG
CAACGTCGTTCTTACGAGAAAACTGCTGGTTCACCTGTAAGTTTGTGTTCAGGAGTTGAT
GACAGCAACGGGAAGAAGCATGAGCTGCGGGAACTGAATAATAAGTTGCTAAGGCCTGAA
TCCGATATTGATGACAGCTGCAGTTGCTCATTAAATGGTGTAGTCTCAAAACATTTTTCC
TTGACAAGGCGGAATCAAGTATTGGACGTAGCCTCAAGATTGGACTTGAAAGAGTTGCTT
GTTGCCTGTGCTGAAGCAGTAGATGAAGCTGATACCTCGACTGCAGAAGTTCTGATGGAT
GCTTTGGAGAAAAGGGTATCGGTTTATGGGGAACCTATGCAACGACTGAGTGCATACATG
TTGGAAGGTCTAAGAGCACGATTATTGTCCTCCGGGAGTAACATATACAAAAAACTGAAG
TGCAATGAACCAACTAGCTCAGAATTGTTGTCCTACATGCAAGTCCTGTATCACATCACC
CCTTACTTCAAGTTCGCTTATATGTCCGCCAATGTTGTCATAAGCGAAGCCATGAAGAAT
GAGAATAGAATCCATATCATTGATTTTCAAATTGCACAGGGAAGTCAATGGGTGTTCCTC
ATCCACTATCTGGCTCGTCGGCCTGGTGGTCCGCCATTTCTTCGCATCACAGGCATTGAT
GATTCCCAATCAGCTCATGCACGCGGTGGTGGACTTCAGCTAGTTGGCGAAAGGTTAGCG
AGCATTGCCAAGTCCTGCGGAGTGCCTTTCGAATTCCATACTGCTGCATTGTCAGGCTGT
ATGGTCAAACTAGAGAACCTAAGAGTTAGACATGGAGAAAGCCTGGCAGTTAACTTCCCT
TACATGTTGCACCACATGCCAGACGAGAGCGTAAGCACTATGAACCATCGGGACCGCCTA
TTAAGACTAGTCAAGAGCTTGTCTCCCAAAATCGTGGCCTTAGTTGAACAAGAAATGAAC
ACCAATACCGCCCCTTTCCTTCCAAGGTTCCGTGAAACTCTAGATTACCACAAAGCAATA
TTCGAATCAGTCGATGTAACTCGCCCGAGGAATGACATGCAACGGATCAGATCAGAGGAG
CATTGTATTGCACGGGATGTTGTCAATCTCATAGCATGTGAAGGGGCTGATAGAGTGGAA
AGGCATGAAGTTTTTGGCAAGTGGAGGTCAAGACTTTTGATGGCTGGATTTACTCCATGC
CCGCTGAGTCCATCGGTTGCTGAGGCCATTAAGGTCATGTTGAAGGAGTATAGCTCAAAT
TATAAGCTTGCTGAAAGCCAGGGGGCGCTTTATATTGGATGGAACAACAGAGCTTTAGCA
ACTTCTTCTGCTTGGCAATTACCTCATTCGCTGCCTTTGGGATCTTGA