Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g011520.3.1
CDS Infomation

Protein kinase (AHRD V3.3 *** A3RI54_SOLTU)
Sequence

ATGGGTTCTTGTTTAAGTGTTCGAATTAAAGCAGAAAGTCCTCTTCATCATGGAGCAAGT
GATGGAAGAGAGTTGAGTAGTAGGCATTCATATTCATCAGCTCCGTTGACTCCTCGTAGT
CAGAGTGAAATACTTGAATCGTCGAATCTGAAAAGTTTTAGTTTCAATGAACTCCGAGTA
GCCACGAGGAACTTTCGTCCAGATAGTGTGTTGGGAGAAGGTGGTTTTGGTTGTGTATTT
AAGGGTTGGATAGACGAGAATACGTTTAAAGCTGCAAGGCCAGGGACTGGATTGGTTATA
GCTGTAAAGAGATTGAACCAAGAAGGCTTTCAAGGTCACAAGGAATGGCTGGCGGAAATT
ACTTACCTGAGCCAGCTATCTCATCCTAATCTCGTGAAGTTGATTGGATATTGCTTAGAA
GATGAACACAGGCTTCTGGTGTACGAATTCATGCCAAGAGGAAGTTTGGAAAATCATCTA
TTCAGAAGGAGTACTTATTTCCAACCACTATCATGGAATCTCCGAATGAAGGTTGCTCTC
GAGGCAGCTAAGGGACTGACATATCTCCACAGTCCAGAAGCTAAAGTTATATATCGGGAT
TTCAAATCGTCGAACATTTTGCTTGATGCTAATTACAATGCAAAGCTTTCTGATTTTGGA
TTGGCGAAGGATGGGCCAATCGACGGTAAAAGCCATGTCTCTACTAGAGTAATGGGTACC
TTTGGTTATGCTGCTCCCGAGTATATGGCCACAGGTCATATAACCACTAGAAGTGACGTA
TACAGTTTCGGGGTTGTTCTTCTAGAAATGCTGACAGGCCGTCGAGTGATGGACAAAAAC
CGACCCCACGGGGAACATAATCTGATTGAATGGGCTAAACCTTTCCTTACTAGTAAACGT
AAAGTCCTCCATATTATGGATCACCGTATAGAAGGTCAGTACTCAGTGGAAGGAGCACTG
AGAGCAGCACTTCTTGCAGTCAAATGCCTGGCATTAGAACCCAAATTCAGGCCTAAAATG
CCCGAGGTAGTAAAGGCATTGGAGCAACTTCAGAACTTGAATGAATCAGGAAGTCTGAAA
CGCGAAACCACACAAAGGAAGCATCACAGAACCTCAACCGATGAAGCTTCAGGAAGAAAA
ACTACGTCTTATCCGAGGCCAGCTGCTTCTCCCCTTGTTACATGA

Peptide Sequence

PEP ID

Solyc04g011520.3.1
PEP Infomation

Protein kinase (AHRD V3.3 *** A3RI54_SOLTU)
Sequence

MGSCLSVRIKAESPLHHGASDGRELSSRHSYSSAPLTPRSQSEILESSNLKSFSFNELRV
ATRNFRPDSVLGEGGFGCVFKGWIDENTFKAARPGTGLVIAVKRLNQEGFQGHKEWLAEI
TYLSQLSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRSTYFQPLSWNLRMKVAL
EAAKGLTYLHSPEAKVIYRDFKSSNILLDANYNAKLSDFGLAKDGPIDGKSHVSTRVMGT
FGYAAPEYMATGHITTRSDVYSFGVVLLEMLTGRRVMDKNRPHGEHNLIEWAKPFLTSKR
KVLHIMDHRIEGQYSVEGALRAALLAVKCLALEPKFRPKMPEVVKALEQLQNLNESGSLK
RETTQRKHHRTSTDEASGRKTTSYPRPAASPLVT*

Transcript Sequence

Transcript ID

Solyc04g011520.3.1
Transcript Infomation

Protein kinase (AHRD V3.3 *** A3RI54_SOLTU)
Sequence

ATACTACATTTCTTTTTGTTCACACTTCACATTTTTGGCTATTATACATTTCACCCTTTT
TTTGAGTTTATATATGTAAACCCAAAACAATCAATTCAATCACTATTCATTATTTTGATA
AAAGTTTTCTTTCTTATAAAGATTGAAACTTTGGTTCATAAATTTTAATGGGTTCTTGTT
TAAGTGTTCGAATTAAAGCAGAAAGTCCTCTTCATCATGGAGCAAGTGATGGAAGAGAGT
TGAGTAGTAGGCATTCATATTCATCAGCTCCGTTGACTCCTCGTAGTCAGAGTGAAATAC
TTGAATCGTCGAATCTGAAAAGTTTTAGTTTCAATGAACTCCGAGTAGCCACGAGGAACT
TTCGTCCAGATAGTGTGTTGGGAGAAGGTGGTTTTGGTTGTGTATTTAAGGGTTGGATAG
ACGAGAATACGTTTAAAGCTGCAAGGCCAGGGACTGGATTGGTTATAGCTGTAAAGAGAT
TGAACCAAGAAGGCTTTCAAGGTCACAAGGAATGGCTGGCGGAAATTACTTACCTGAGCC
AGCTATCTCATCCTAATCTCGTGAAGTTGATTGGATATTGCTTAGAAGATGAACACAGGC
TTCTGGTGTACGAATTCATGCCAAGAGGAAGTTTGGAAAATCATCTATTCAGAAGGAGTA
CTTATTTCCAACCACTATCATGGAATCTCCGAATGAAGGTTGCTCTCGAGGCAGCTAAGG
GACTGACATATCTCCACAGTCCAGAAGCTAAAGTTATATATCGGGATTTCAAATCGTCGA
ACATTTTGCTTGATGCTAATTACAATGCAAAGCTTTCTGATTTTGGATTGGCGAAGGATG
GGCCAATCGACGGTAAAAGCCATGTCTCTACTAGAGTAATGGGTACCTTTGGTTATGCTG
CTCCCGAGTATATGGCCACAGGTCATATAACCACTAGAAGTGACGTATACAGTTTCGGGG
TTGTTCTTCTAGAAATGCTGACAGGCCGTCGAGTGATGGACAAAAACCGACCCCACGGGG
AACATAATCTGATTGAATGGGCTAAACCTTTCCTTACTAGTAAACGTAAAGTCCTCCATA
TTATGGATCACCGTATAGAAGGTCAGTACTCAGTGGAAGGAGCACTGAGAGCAGCACTTC
TTGCAGTCAAATGCCTGGCATTAGAACCCAAATTCAGGCCTAAAATGCCCGAGGTAGTAA
AGGCATTGGAGCAACTTCAGAACTTGAATGAATCAGGAAGTCTGAAACGCGAAACCACAC
AAAGGAAGCATCACAGAACCTCAACCGATGAAGCTTCAGGAAGAAAAACTACGTCTTATC
CGAGGCCAGCTGCTTCTCCCCTTGTTACATGAATGGAGAATGAATGGTAACATCTTTAAC
CATATACACACTACCTGAACCGAAAGGAAACGATGAGACGACTTACTTGGTGAAGATATA
TCTATATCTGCTGATAGAGCACGAAGAGTAATTTGATCAAATTCGCGGACATTTTATGAG
AAGGTATGCTTATGATACTAGACTGAATCTTGGAATCTAGGAACTATGTTGTAAATTTGT
ATCAATTATGTTAGCAATCTACAGTTCTTATTTTGATCTAGCTGGAAATTTAACATTGAT
GTTTTCCTCACACATCTATGCTAAATTGACTTTTGTTGATCATCTTTTGAGAGCCAAAGA
TGTGAAAAGGACTTGGTAACTTATTTGTACTGCTTTTTGAGTATCTTATACATATCTGTG
ATAGAATTTAAACGGAGTAATATGGTCGGTGAGAATTCATATCATCGATCCAAACTTGTT
TGAGGCTGACGTATATGCGTTTTCAGAATCTTATAGCGTTACACCAATACAATGAGTATC
TACAAC