Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g009850.3.1
CDS Infomation	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence	ATGGCAAACTATGATCGAGCAAAAGATCTCAAGGCCTTCGATGACACAAAGGCTGGTGTA AAAGGACTAGTCGATTCAGGAATAGTTCATATTCCCGAGATCTTTGTCACACCGACCTTA ATAGAAAATGAGTTCAGTGCTGAGAATCTTGATTCAGATTCAAACATAGTTAACGTTCAG ATCCCAGTTATAGATCTGAAGGGTATGAATGAAGACGATTTTCGACGTACGAGAATTGTT GAAGAGGTAGGTGAGGCATGTAAGAGTTGGGGATTTTTTCAAGTTGTGAATCATGGTGTG CCACAACATGTTATGGATGAGATGATTAGTGGAGTTAAAAAATTTAATGAACAATCAAGT GAGAAAAAGATGGAGTTTTATTCAAGGGATAATTTGAAGAAAGTGAAATTTAATAGTAAT TTTGATCTTTATTCATCTAAAGCTACTAATTGGAGGGATAGTTTAGCTTGTGTTATGGCT CCTAATCCACCTACTAATGATGAATTACCACAAGCGTGTAGGGAGGAATTACTTCAATAT TCTCAACATGTTAGAAAGTTGGGCCATACAATATTTGAGTTACTAGCAGAGGCACTTGGG CTTAAGCCCAATCACTTATTGGGCCTGGACTGTGCAAGGGGCCATTTCATTCTCTGTCAT TACTATCCACCTTGTCCTGAGCCCAATAAGACTCTTGGAATCACAAAACATACTGATCCA GATTTCTTCACAATTCTTCTACAAGATCAAATTGGTGGGCTTCAAATTAATCACCAAAAT CAATGGATTGATATTCATCCTGTTACTGGAGCCCTACTTCTATCAAATGACAAGTTCAAA AGTGCTGAGCATAGAGTATTGTCAAAACATATTGGGCCAAGGATATCAATTGCATGTTTC TTCACAACTCAATTTCAGCCATTTGATACACTTTATGGCCCAATAAAGGAATTGTTGTCT GATGAAAATCATGCTTTGTACAAAGAAACAACAGTGAGAGATTATGTGACTTATTACAAC TCTAGAGGACTTGGGGCTCACCCTGCCCTTCTTCATTTAAGGCTCGATCCGTCCATTTGA

Peptide Sequence

PEP ID	Solyc04g009850.3.1
PEP Infomation	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence	MANYDRAKDLKAFDDTKAGVKGLVDSGIVHIPEIFVTPTLIENEFSAENLDSDSNIVNVQ IPVIDLKGMNEDDFRRTRIVEEVGEACKSWGFFQVVNHGVPQHVMDEMISGVKKFNEQSS EKKMEFYSRDNLKKVKFNSNFDLYSSKATNWRDSLACVMAPNPPTNDELPQACREELLQY SQHVRKLGHTIFELLAEALGLKPNHLLGLDCARGHFILCHYYPPCPEPNKTLGITKHTDP DFFTILLQDQIGGLQINHQNQWIDIHPVTGALLLSNDKFKSAEHRVLSKHIGPRISIACF FTTQFQPFDTLYGPIKELLSDENHALYKETTVRDYVTYYNSRGLGAHPALLHLRLDPSI*

Transcript Sequence

Transcript ID	Solyc04g009850.3.1
Transcript Infomation	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)
Sequence	ATGGCAAACTATGATCGAGCAAAAGATCTCAAGGCCTTCGATGACACAAAGGCTGGTGTA AAAGGACTAGTCGATTCAGGAATAGTTCATATTCCCGAGATCTTTGTCACACCGACCTTA ATAGAAAATGAGTTCAGTGCTGAGAATCTTGATTCAGATTCAAACATAGTTAACGTTCAG ATCCCAGTTATAGATCTGAAGGGTATGAATGAAGACGATTTTCGACGTACGAGAATTGTT GAAGAGGTAGGTGAGGCATGTAAGAGTTGGGGATTTTTTCAAGTTGTGAATCATGGTGTG CCACAACATGTTATGGATGAGATGATTAGTGGAGTTAAAAAATTTAATGAACAATCAAGT GAGAAAAAGATGGAGTTTTATTCAAGGGATAATTTGAAGAAAGTGAAATTTAATAGTAAT TTTGATCTTTATTCATCTAAAGCTACTAATTGGAGGGATAGTTTAGCTTGTGTTATGGCT CCTAATCCACCTACTAATGATGAATTACCACAAGCGTGTAGGGAGGAATTACTTCAATAT TCTCAACATGTTAGAAAGTTGGGCCATACAATATTTGAGTTACTAGCAGAGGCACTTGGG CTTAAGCCCAATCACTTATTGGGCCTGGACTGTGCAAGGGGCCATTTCATTCTCTGTCAT TACTATCCACCTTGTCCTGAGCCCAATAAGACTCTTGGAATCACAAAACATACTGATCCA GATTTCTTCACAATTCTTCTACAAGATCAAATTGGTGGGCTTCAAATTAATCACCAAAAT CAATGGATTGATATTCATCCTGTTACTGGAGCCCTACTTCTATCAAATGACAAGTTCAAA AGTGCTGAGCATAGAGTATTGTCAAAACATATTGGGCCAAGGATATCAATTGCATGTTTC TTCACAACTCAATTTCAGCCATTTGATACACTTTATGGCCCAATAAAGGAATTGTTGTCT GATGAAAATCATGCTTTGTACAAAGAAACAACAGTGAGAGATTATGTGACTTATTACAAC TCTAGAGGACTTGGGGCTCACCCTGCCCTTCTTCATTTAAGGCTCGATCCGTCCATTTGA