Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g009810.3.1
CDS Infomation

Protein pelota homolog (AHRD V3.3 *** K4BPD6_SOLLC)
Sequence

ATGAAGATTGTTCGTAGAGACTTTGTTCCTGATGGTTCTGGTAGTGTAAAGATAATTCCA
GAAGAAGCTGATGATCTATGGGTTGCTTATAATCTGATAGCTGAAGGTGATACTGTATTA
GCTGTTACTGTTAGGAAGGTCCTGAGGGAAGCTGCTTCTGGAGGAAGAGATGCTGAACGA
GTGAAACTGAAATTGGAAATTAAAGTTGAGAATGTGGAGTATGACAAAGAAGGTTCTGCC
TTGCGTATTCGCGGGAAGAATATTCTGGAGAATGAACATGTAAAGATAGGGGCCTTTCAC
ACTCTGGAAATTGAGCAACACAGACCTTTTGTGCTAAGAAAGGTGGTCTGGGACTCACTG
GCACGGGAGGTTCTTCGTCAAGCTTCTGATCCATCTGCAAGTGCTGATCTGGCTGTGGTT
CTGATGCAAGAAGGATTGGCACACATTCTTCTTATTGGTAAAAGTGTGACTATCACCCGT
TCTCGTATAGAGTCTTCTATACCGCGCAAGCATGGACCGGCTATTGCAGGTTATGATAAG
GCGTTAAATAAATTCTTTGACAATGTTCTACAGGCCTTTGTCAAGCATGTTGATTTCAAA
GTAGTTCGCTGTGCTGTGATTGCAAGTCCAGGATTCACCAAGGATCAGTTTCATCGTCAC
CTGTTGTTGGAAGCCGAGAGGAAGCAACTAAGACCTATAATAGAAAATAAGTCACGCATA
ATTCTTGTCCATACAACCTCGGGATACAAACATAGTTTGAAAGAGGTTATGGATGCCCCA
AATGTAATGACTATGATAAAAGATACAAAAGCTGCCAAAGAGGTTCAAGCCCTAAAGGAT
TTTTTCAACATGCTTTCAAATGATCCTGATCGTGCATGCTATGGACCAAAGCATGTTGAA
GTTGCCCATGAGCGTCTGGCTATTCAGACACTTCTCATTACTGACGAGCTCTTTAGGAGT
TCTGATGTAGAAACGAGGAAAAAGTATGCTAATTTGGTCGATTCAGTCAAGGATTCAGGT
GGTACTGCTCTCATTTTCTCGTCAATGCATGTCTCCGGAGAACAATTGAATCAGCTAACC
GGCATTGCTGCAATCCTTCGTTTTCCTTTGCCGGAGCTGGAAGACATTGAGATGTGA

Peptide Sequence

PEP ID

Solyc04g009810.3.1
PEP Infomation

Protein pelota homolog (AHRD V3.3 *** K4BPD6_SOLLC)
Sequence

MKIVRRDFVPDGSGSVKIIPEEADDLWVAYNLIAEGDTVLAVTVRKVLREAASGGRDAER
VKLKLEIKVENVEYDKEGSALRIRGKNILENEHVKIGAFHTLEIEQHRPFVLRKVVWDSL
AREVLRQASDPSASADLAVVLMQEGLAHILLIGKSVTITRSRIESSIPRKHGPAIAGYDK
ALNKFFDNVLQAFVKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERKQLRPIIENKSRI
ILVHTTSGYKHSLKEVMDAPNVMTMIKDTKAAKEVQALKDFFNMLSNDPDRACYGPKHVE
VAHERLAIQTLLITDELFRSSDVETRKKYANLVDSVKDSGGTALIFSSMHVSGEQLNQLT
GIAAILRFPLPELEDIEM*

Transcript Sequence

Transcript ID

Solyc04g009810.3.1
Transcript Infomation

Protein pelota homolog (AHRD V3.3 *** K4BPD6_SOLLC)
Sequence

AACCTAAAACATTAAAAGGACACAAACCGTTAAAACCTATAAAAAGTCTTTTCTCCATTG
AACTGAAGCAAATCTCATACGAAAAAAATTCTATAAAAAGTTGTTTAAATTCATCTTTTT
TTCTGCTATTTACATGCAAAATTATTGAATTTTTCATTAAGTTGATAAATTTGTTTCATT
CAATATGAAGATTGTTCGTAGAGACTTTGTTCCTGATGGTTCTGGTAGTGTAAAGATAAT
TCCAGAAGAAGCTGATGATCTATGGGTTGCTTATAATCTGATAGCTGAAGGTGATACTGT
ATTAGCTGTTACTGTTAGGAAGGTCCTGAGGGAAGCTGCTTCTGGAGGAAGAGATGCTGA
ACGAGTGAAACTGAAATTGGAAATTAAAGTTGAGAATGTGGAGTATGACAAAGAAGGTTC
TGCCTTGCGTATTCGCGGGAAGAATATTCTGGAGAATGAACATGTAAAGATAGGGGCCTT
TCACACTCTGGAAATTGAGCAACACAGACCTTTTGTGCTAAGAAAGGTGGTCTGGGACTC
ACTGGCACGGGAGGTTCTTCGTCAAGCTTCTGATCCATCTGCAAGTGCTGATCTGGCTGT
GGTTCTGATGCAAGAAGGATTGGCACACATTCTTCTTATTGGTAAAAGTGTGACTATCAC
CCGTTCTCGTATAGAGTCTTCTATACCGCGCAAGCATGGACCGGCTATTGCAGGTTATGA
TAAGGCGTTAAATAAATTCTTTGACAATGTTCTACAGGCCTTTGTCAAGCATGTTGATTT
CAAAGTAGTTCGCTGTGCTGTGATTGCAAGTCCAGGATTCACCAAGGATCAGTTTCATCG
TCACCTGTTGTTGGAAGCCGAGAGGAAGCAACTAAGACCTATAATAGAAAATAAGTCACG
CATAATTCTTGTCCATACAACCTCGGGATACAAACATAGTTTGAAAGAGGTTATGGATGC
CCCAAATGTAATGACTATGATAAAAGATACAAAAGCTGCCAAAGAGGTTCAAGCCCTAAA
GGATTTTTTCAACATGCTTTCAAATGATCCTGATCGTGCATGCTATGGACCAAAGCATGT
TGAAGTTGCCCATGAGCGTCTGGCTATTCAGACACTTCTCATTACTGACGAGCTCTTTAG
GAGTTCTGATGTAGAAACGAGGAAAAAGTATGCTAATTTGGTCGATTCAGTCAAGGATTC
AGGTGGTACTGCTCTCATTTTCTCGTCAATGCATGTCTCCGGAGAACAATTGAATCAGCT
AACCGGCATTGCTGCAATCCTTCGTTTTCCTTTGCCGGAGCTGGAAGACATTGAGATGTG
ATGGATGAAATGATCGTTCATCGGTAATGAATGTTATCTGCACTGTTAAAAATGTGACTA
TTCACTATAAAATGAAGTGAATACACAGAAACTGTAATGTTTTTCTAGCAGTGGAAGTAA
CATCATCGACTGATGTTGCGTATCGCGTGTTGTATATTCGTTTTTTTTTTTTTTTACTAA
TTGAAATGTAATATATCGTCGATTATCGAGGTGTACTATATCAGTGTAACGATATTTTTC
ATCGAATATGTTGGCTTTTAGATAAAGTTTTCTGGTTGTTCATA