Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g009800.3.1
CDS Infomation

Calcium dependent protein kinase (AHRD V3.3 *** E1CFU1_SOLLC)
Sequence

ATGGGGAACACTTGTGTTGGACCTAGTATTTCTAGAAATAGGTTCTTGCAGTCTGTTTCA
GCTGCAATGTGGCCGGCTCGGGTGCCGGATGACTCTGGTTCCACCACTAATGGTGGAAGT
AGTAGGGGTGGAACAGTAGAATCTGGGAAAGACCCTGATTTGGTAGTTCAAAATAGGGCA
CCTGAACAGATGACAATGCCTAAGTCTGAACAGAAGGAAGTGGAACCGGTGAAGAAGGAA
GAGGAACCGGTAAAGCCTAAGAAGGCGGTAGAGATGAAGAGGGTAGGTAGTGCAGGACTT
AAGACTGATTCTGTGTTACAGAAGAAAACAGGCAACTTAAAGGAGTTTTTCAGTATAGGG
AAGAAATTAGGACAAGGACAATTTGGGACTACATTTAAATGTGTCGAAAAAGGGACAGGG
AAAGAGTATGCTTGTAAATCGATTGCTAAGAGGAAGTTGTTGACAGATGATGATGTTGAA
GATGTTAGAAGGGAAATTCAGATAATGCATCACTTAGCAGGGCATCCGAATGTTATATCG
ATAAAAGGGGCTTATGAGGATGCGGTAGCTGTTCATGTAGTTATGGAACGGTGTGCTGGA
GGTGAGCTTTTCGATAGGATTATTCAGCGGGGGCATTATACAGAAAGAAAAGCAGCTGAG
CTCACAAGGACTATTTTTGGAGTTGTTGAAGCTTGTCATTCGCTGAGTGTCATGCATCGT
GATCTTAAGCCTGAAAATTTCCTTTTTGTTGATCAGAAGGAGGATTCACTTCTCAAAACT
ATTGATTTTGGATTGTCAGTTTTCTTCAAACCAGGTGAGAGATTTACTGATGTTGTTGGT
AGTCCTTATTATGTTGCACCGGAAGTTCTCAAAAAGCGGTATGGTCCTGAAGCTGATGTT
TGGAGTGCTGGTGTGATTGTTTACATCTTGTTAAGTGGAGTGCCTCCTTTCTGGGCTGAA
AATGAGCAAGGGATATTTGAACAAGTCCTGCATGGTGATCTCGATTTCTCGTCAGATCCA
TGGCCTAGTATTTCAGAAGATGCAAAAGACTTAGTTAGGGGAATGCTTGTTCGAGATCCC
AAAAAACGTTTGACTGCTCATGAAGTCTTGTGCCATCGCTGGGTTCAAGTTGATGGTGTG
GCTCCAGATAAGCCTTTGGATTCTGCAGTTCTAAGTCGAATGAAACAATTTTCTGCAATG
AACAAGCTCAAGAAGATGGCTTTGAGAGTCATTGCTGAAAGCCTGTCTGAAGAAGAAATT
GCCGGTCTGAAAGAAATGTTCAAGATGATTGATACAGACAATAGTGGTCAAATAACTTTT
GAGGAGCTCAAAGTTGGTTTAAAAAGAGTTGGCGCTAATCTCAAGGAATCCGAGATCTAT
GATCTTATGCAAGCAGCAGATGTTGATAACAGCGGCACAATTGACTATGGGGAATTTATA
GCTGCAACATTACATTTCAACAAAATTGAAAGAGAAGATCATCTATTTGCTGCTTTCTCT
TACTTTGATAAAGATGGAAGTGGCTACATCACCGCAGACGAGCTTCAACAAGCTTGTGAG
GAATTTGGCATCGGTGACGTCCACCTGGAAGATATGATCAGAGATGCTGATCAGGACAAT
GATGGACGCATTGATTACAATGAGTTTGTCGCGATGATGCAAAAGGGACATCCGGCTAGT
GGTGTTGGCAAGAAAGGTCTAGAACACAGTTTCAGCACCGGATTTAGAGACGTTCTAAAA
CTTTAG

Peptide Sequence

PEP ID

Solyc04g009800.3.1
PEP Infomation

Calcium dependent protein kinase (AHRD V3.3 *** E1CFU1_SOLLC)
Sequence

MGNTCVGPSISRNRFLQSVSAAMWPARVPDDSGSTTNGGSSRGGTVESGKDPDLVVQNRA
PEQMTMPKSEQKEVEPVKKEEEPVKPKKAVEMKRVGSAGLKTDSVLQKKTGNLKEFFSIG
KKLGQGQFGTTFKCVEKGTGKEYACKSIAKRKLLTDDDVEDVRREIQIMHHLAGHPNVIS
IKGAYEDAVAVHVVMERCAGGELFDRIIQRGHYTERKAAELTRTIFGVVEACHSLSVMHR
DLKPENFLFVDQKEDSLLKTIDFGLSVFFKPGERFTDVVGSPYYVAPEVLKKRYGPEADV
WSAGVIVYILLSGVPPFWAENEQGIFEQVLHGDLDFSSDPWPSISEDAKDLVRGMLVRDP
KKRLTAHEVLCHRWVQVDGVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAESLSEEEI
AGLKEMFKMIDTDNSGQITFEELKVGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFI
AATLHFNKIEREDHLFAAFSYFDKDGSGYITADELQQACEEFGIGDVHLEDMIRDADQDN
DGRIDYNEFVAMMQKGHPASGVGKKGLEHSFSTGFRDVLKL*

Transcript Sequence

Transcript ID

Solyc04g009800.3.1
Transcript Infomation

Calcium dependent protein kinase (AHRD V3.3 *** E1CFU1_SOLLC)
Sequence

ATTTTCATTTGTTATGCTGAGAAACTTCTTTTCTTACCTTGGTCACTAAGCTGTTCTTTT
GACTTCCTCAAATGTAATAACAAAAATTTCTGAATATTTATCCAAAGATCAAGACTTTTT
ATCATTCTTGGGATTATTTGGCTTTTGCTTTGTCTTTTTTCTTTGATTAATTTATCTACT
TGGATTGCTTATTCAATTTCTTATCAATGGGTGCATAGTTATTTTGCTAATTACATGAAC
TTGTATTCTTACTTAGATAGGTTTTTGGGTTCTTCTTGTTTCTTGATTTGCTATACTTGA
AGTGGAACAAGTTCTTGATTTTACTACTTTTTTGACTAGTGTTGTGTTTGATAGAGAAGG
GTTTGACTTTTTCTTGATTATTTGATTGAAATTATCAAGATCTTGTTGATTTTGAGTGGC
CATTATAGAGCTATGTTTGTAATTATATAAGATATTGAACCGTTGGGGAAGTGAAAGATT
GGATTTTGAGATTAGTGTCAAATGGGGAACACTTGTGTTGGACCTAGTATTTCTAGAAAT
AGGTTCTTGCAGTCTGTTTCAGCTGCAATGTGGCCGGCTCGGGTGCCGGATGACTCTGGT
TCCACCACTAATGGTGGAAGTAGTAGGGGTGGAACAGTAGAATCTGGGAAAGACCCTGAT
TTGGTAGTTCAAAATAGGGCACCTGAACAGATGACAATGCCTAAGTCTGAACAGAAGGAA
GTGGAACCGGTGAAGAAGGAAGAGGAACCGGTAAAGCCTAAGAAGGCGGTAGAGATGAAG
AGGGTAGGTAGTGCAGGACTTAAGACTGATTCTGTGTTACAGAAGAAAACAGGCAACTTA
AAGGAGTTTTTCAGTATAGGGAAGAAATTAGGACAAGGACAATTTGGGACTACATTTAAA
TGTGTCGAAAAAGGGACAGGGAAAGAGTATGCTTGTAAATCGATTGCTAAGAGGAAGTTG
TTGACAGATGATGATGTTGAAGATGTTAGAAGGGAAATTCAGATAATGCATCACTTAGCA
GGGCATCCGAATGTTATATCGATAAAAGGGGCTTATGAGGATGCGGTAGCTGTTCATGTA
GTTATGGAACGGTGTGCTGGAGGTGAGCTTTTCGATAGGATTATTCAGCGGGGGCATTAT
ACAGAAAGAAAAGCAGCTGAGCTCACAAGGACTATTTTTGGAGTTGTTGAAGCTTGTCAT
TCGCTGAGTGTCATGCATCGTGATCTTAAGCCTGAAAATTTCCTTTTTGTTGATCAGAAG
GAGGATTCACTTCTCAAAACTATTGATTTTGGATTGTCAGTTTTCTTCAAACCAGGTGAG
AGATTTACTGATGTTGTTGGTAGTCCTTATTATGTTGCACCGGAAGTTCTCAAAAAGCGG
TATGGTCCTGAAGCTGATGTTTGGAGTGCTGGTGTGATTGTTTACATCTTGTTAAGTGGA
GTGCCTCCTTTCTGGGCTGAAAATGAGCAAGGGATATTTGAACAAGTCCTGCATGGTGAT
CTCGATTTCTCGTCAGATCCATGGCCTAGTATTTCAGAAGATGCAAAAGACTTAGTTAGG
GGAATGCTTGTTCGAGATCCCAAAAAACGTTTGACTGCTCATGAAGTCTTGTGCCATCGC
TGGGTTCAAGTTGATGGTGTGGCTCCAGATAAGCCTTTGGATTCTGCAGTTCTAAGTCGA
ATGAAACAATTTTCTGCAATGAACAAGCTCAAGAAGATGGCTTTGAGAGTCATTGCTGAA
AGCCTGTCTGAAGAAGAAATTGCCGGTCTGAAAGAAATGTTCAAGATGATTGATACAGAC
AATAGTGGTCAAATAACTTTTGAGGAGCTCAAAGTTGGTTTAAAAAGAGTTGGCGCTAAT
CTCAAGGAATCCGAGATCTATGATCTTATGCAAGCAGCAGATGTTGATAACAGCGGCACA
ATTGACTATGGGGAATTTATAGCTGCAACATTACATTTCAACAAAATTGAAAGAGAAGAT
CATCTATTTGCTGCTTTCTCTTACTTTGATAAAGATGGAAGTGGCTACATCACCGCAGAC
GAGCTTCAACAAGCTTGTGAGGAATTTGGCATCGGTGACGTCCACCTGGAAGATATGATC
AGAGATGCTGATCAGGACAATGATGGACGCATTGATTACAATGAGTTTGTCGCGATGATG
CAAAAGGGACATCCGGCTAGTGGTGTTGGCAAGAAAGGTCTAGAACACAGTTTCAGCACC
GGATTTAGAGACGTTCTAAAACTTTAGAGAGCCTTTGCCTTTGCCTTTCATCCCCCTCCT
TTAGTTTTGTTGTATAGTAGAAACTAGTGCTTGTCAAAGCAACAACTTTGCTATTTCAAT
GCACATCAGTGAACATTTCTCCCAGTTTCTGCAAAATTTTCTCAACATTTGCTTCTGCAA
TACTAGTGTTCATTGATAACTGTCAATATGTTGCATAGCAACAAACTTCTGTCACATAAT
TACGCGACGTTGCAACTTTGCACCTATAGAACGTTGAAGTATAATATGTATCGATGAGCA
GGTACAACTCGATTCTTC