Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g009600.3.1
CDS Infomation

TNF receptor-associated factor family protein (AHRD V3.3 *** A0A0B2QRS0_GLYSO)
Sequence

ATGGACCCTCCTACAGTTGAAGAAAAAATCAAAACAGCAGAACTTGAAGACGTGCAATTA
GAGGAAGTGAAGGAAACTAAACCAGCAGCAATTGAGGAGGACGATGCCCTCTTCCACTGT
GATCTATTTGATGCAGAGATGGTTCAAAAGGTAGCGGATGAATTTCTCCCTGGACTAGCC
TCTGCCTGTATTGATAATACGACCGGTGGTTTGTTGAATAGCCCCGCTTCTGTGGCTGTT
GATATTAGAAGAGAAATGGTGGACTATCTTGTCCAGAGAAGCGAGATGTTTGTTGCAGAA
TCTGTTGTCTTAGAAGGTGACTCGGTTGTTGAAGTGTCAGACAACCCTCATGATATTATA
TCGGATTTTATTGATGATTTTGCACAGTCTAAGAGGAACTTTTTCTGCAAAGTCTCATCA
TGGATGCTAAGTGAAAGGAGAGAGGAAAGGATAGATGATTTCGTACAAGAAATGGAAATG
AATGGCTTTTGGTTGATGGCGAGGAGGATAGCAGTGGCACAAACATCGATAAGAAATATC
GACTTCAAGAACATTTATCACTGCAGTATGAGGTTCAAATCTGAAGAAGAGCTTTCGAAG
CATATCACCTTGTGTGGTTTCAGGGAATTGCACTGTGAAAATGAGGGATGCAATGCCCGA
TTTAGTGCAGCTCAGCTGGAACTGCATGATTCAACATGTCCGTTCAAAATACTCCAATGC
GAGCAGAAATGCCCAGAAACACTCATGAGGCGTGAAATGGACAGGCACTGTATAACTGTA
TGTCCAATGAAGCTTGCCAACTGCCCCTTCTATCCAGTAGGCTGTGTGTCTACTATTCCT
CAATGCAAAACTGACCAACACCGTCTTGAGAATCTTCTGCCTCACTTGACCCACATCTTA
AAACTTATTCATAAGGAAGCATCTTTCGAGGCTTTGAAGAAAAGGGCTGAACATTTGTTG
GAGGCATCATCACCTGGACGGCTGGCAGCTGCTCGTGATGCAAGATCATTAACAGTTGCA
ATCAAGCGTATTGATGCAAAGCTTGGACCTTTGGAAGCTGAGGAAATTAAAGAGGACAAT
GCAGATGACGCTGACTTGAAAGATGAAAAAAAGGATAGCACTGATCTATCCGCCAAAAAG
GATAGCAGTGATCTATCCGCCAAAAAGGATAGCACTGATCTATCCGCCAAAAAGGATAGC
AGTGATCTATCCGCCAAAAAGGATAGCACTGATCTATCCGCCAAAAAGGATAGCAGTGAT
CTATCCGCCAAAAAGGATAGCACTTATCTATCCGCCAAAAAGGATTGCTCTATTGACTTG
TCTCATAATGATGAACAATCTCCACAGCATAACTCCTCAGCTTCACCGCACAAAACAGTC
TCACCTGACAAATCAGAGAAAGTTGTGGAACCAACCGTAACGGATTCAACCAATGAACAC
TGTGAGAAACCAGACTCTAGAGATCTACCCCATTACAAAAATGACGGTTTGAAATCACCT
GACAAAGGTGAAGAGTCTCTTAGCACATCCGAAAAACATCAAGATGTCACAACTTCAGCA
CACAAACTAGAGTCACCTAAAAGTGAAGATCCTCCCAAGTCACCCGAGAAGCATCATAAT
TCAACAACTTCTGAAGAACAAAAGGAGTGA

Peptide Sequence

PEP ID

Solyc04g009600.3.1
PEP Infomation

TNF receptor-associated factor family protein (AHRD V3.3 *** A0A0B2QRS0_GLYSO)
Sequence

MDPPTVEEKIKTAELEDVQLEEVKETKPAAIEEDDALFHCDLFDAEMVQKVADEFLPGLA
SACIDNTTGGLLNSPASVAVDIRREMVDYLVQRSEMFVAESVVLEGDSVVEVSDNPHDII
SDFIDDFAQSKRNFFCKVSSWMLSERREERIDDFVQEMEMNGFWLMARRIAVAQTSIRNI
DFKNIYHCSMRFKSEEELSKHITLCGFRELHCENEGCNARFSAAQLELHDSTCPFKILQC
EQKCPETLMRREMDRHCITVCPMKLANCPFYPVGCVSTIPQCKTDQHRLENLLPHLTHIL
KLIHKEASFEALKKRAEHLLEASSPGRLAAARDARSLTVAIKRIDAKLGPLEAEEIKEDN
ADDADLKDEKKDSTDLSAKKDSSDLSAKKDSTDLSAKKDSSDLSAKKDSTDLSAKKDSSD
LSAKKDSTYLSAKKDCSIDLSHNDEQSPQHNSSASPHKTVSPDKSEKVVEPTVTDSTNEH
CEKPDSRDLPHYKNDGLKSPDKGEESLSTSEKHQDVTTSAHKLESPKSEDPPKSPEKHHN
STTSEEQKE*

Transcript Sequence

Transcript ID

Solyc04g009600.3.1
Transcript Infomation

TNF receptor-associated factor family protein (AHRD V3.3 *** A0A0B2QRS0_GLYSO)
Sequence

ATTTAGACGTAATCTAAATTAATTGAATTTTAATGTGAATATTAAACGCGGAAAAAAGTT
CTTGTCTTTTGGACGGTCAAAATTGCTCTCTTGTATCATATAGAACGCACGTCCGAGAAT
ATGGAGCTTTTCAACATTTTCCCACCAAATTGTGCGGAGACAAAATAGGAACCCACAAGA
TTCGAAGTTCTTTATCTCTTTGGTCATATCGGAAGCTTCTTTGAACATGGACCCTCCTAC
AGTTGAAGAAAAAATCAAAACAGCAGAACTTGAAGACGTGCAATTAGAGGAAGTGAAGGA
AACTAAACCAGCAGCAATTGAGGAGGACGATGCCCTCTTCCACTGTGATCTATTTGATGC
AGAGATGGTTCAAAAGGTAGCGGATGAATTTCTCCCTGGACTAGCCTCTGCCTGTATTGA
TAATACGACCGGTGGTTTGTTGAATAGCCCCGCTTCTGTGGCTGTTGATATTAGAAGAGA
AATGGTGGACTATCTTGTCCAGAGAAGCGAGATGTTTGTTGCAGAATCTGTTGTCTTAGA
AGGTGACTCGGTTGTTGAAGTGTCAGACAACCCTCATGATATTATATCGGATTTTATTGA
TGATTTTGCACAGTCTAAGAGGAACTTTTTCTGCAAAGTCTCATCATGGATGCTAAGTGA
AAGGAGAGAGGAAAGGATAGATGATTTCGTACAAGAAATGGAAATGAATGGCTTTTGGTT
GATGGCGAGGAGGATAGCAGTGGCACAAACATCGATAAGAAATATCGACTTCAAGAACAT
TTATCACTGCAGTATGAGGTTCAAATCTGAAGAAGAGCTTTCGAAGCATATCACCTTGTG
TGGTTTCAGGGAATTGCACTGTGAAAATGAGGGATGCAATGCCCGATTTAGTGCAGCTCA
GCTGGAACTGCATGATTCAACATGTCCGTTCAAAATACTCCAATGCGAGCAGAAATGCCC
AGAAACACTCATGAGGCGTGAAATGGACAGGCACTGTATAACTGTATGTCCAATGAAGCT
TGCCAACTGCCCCTTCTATCCAGTAGGCTGTGTGTCTACTATTCCTCAATGCAAAACTGA
CCAACACCGTCTTGAGAATCTTCTGCCTCACTTGACCCACATCTTAAAACTTATTCATAA
GGAAGCATCTTTCGAGGCTTTGAAGAAAAGGGCTGAACATTTGTTGGAGGCATCATCACC
TGGACGGCTGGCAGCTGCTCGTGATGCAAGATCATTAACAGTTGCAATCAAGCGTATTGA
TGCAAAGCTTGGACCTTTGGAAGCTGAGGAAATTAAAGAGGACAATGCAGATGACGCTGA
CTTGAAAGATGAAAAAAAGGATAGCACTGATCTATCCGCCAAAAAGGATAGCAGTGATCT
ATCCGCCAAAAAGGATAGCACTGATCTATCCGCCAAAAAGGATAGCAGTGATCTATCCGC
CAAAAAGGATAGCACTGATCTATCCGCCAAAAAGGATAGCAGTGATCTATCCGCCAAAAA
GGATAGCACTTATCTATCCGCCAAAAAGGATTGCTCTATTGACTTGTCTCATAATGATGA
ACAATCTCCACAGCATAACTCCTCAGCTTCACCGCACAAAACAGTCTCACCTGACAAATC
AGAGAAAGTTGTGGAACCAACCGTAACGGATTCAACCAATGAACACTGTGAGAAACCAGA
CTCTAGAGATCTACCCCATTACAAAAATGACGGTTTGAAATCACCTGACAAAGGTGAAGA
GTCTCTTAGCACATCCGAAAAACATCAAGATGTCACAACTTCAGCACACAAACTAGAGTC
ACCTAAAAGTGAAGATCCTCCCAAGTCACCCGAGAAGCATCATAATTCAACAACTTCTGA
AGAACAAAAGGAGTGAAATAAGATCTTTGCGGATCAAATGGAATTCAGACTGTGATCAGC
AAGTCAGCATCTGACTAATGGAGTTTTAACAGATCCATGGTTGGAAAGGTAAAACAGCGA
AAAACTCATTTCTGAAAGTAAATGTATGTGTAGCCACCAAATGAGAAGTAGAATGCAAAA
TTTTGAAGGTCAAGTATAAGAGAACACATATTCATTTTGTATATTGAAGTGATCAGTACC
TTCAAGAGTACTGATGCTCGAATTCTCAGGCTGGAAGATTGACGACAAGAAAGTAAGTAC
ATTGTTTAAAGATTGTTTCTATCTTCAAATCTGAGCTGGAGCAAGGCCATAGCTTAGGAG
ATTGCATGAAATAGTTAAAGTTGCATACTAGTTCTGATCTTCTTCAAAAATGGCACAATT
TTGTTTGAAATCCTTTTTTTCATCTCCATACATAGACTGATATGAACATTTTTCCTGTAT
AATTTATCACACTAGCAAGTTTTCCCCTTGCTTATTCATTTTTTCTTGCTTGTAATTTGC
TTTGTACAAAACAGAGTTTTATTTTTCCTTGTTAGTGATTCACATTCAATTTGTTTCAAC
TTCAATCAAATGCATACTCCTTTTTCACTCTAGTGAATTTTCTAACACTGCTAGTCTGCT
ATTGCCAATTGGTACATTTTAATTATCATTCTATCACGAC