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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g009420.3.1
CDS Infomation

PsbP domain protein (AHRD V3.3 *** G7JC63_MEDTR)
Sequence

ATGTCCGCCATTAGCTCACTGGTTTGCTCAAATATCTTTCGAAATGGCTTCTTTCAGTGT
CTCCCGAGCATATCATCCATTATCACTCCATTGCAGTTGAAAACGAGAAGCAGATCCTTA
GTTGTGTTATCGAATGAGGATGAGTTGGTTCCAACTTATTCAACGAGAAGACGAGCCCTG
AACGTATCAATCTTGACGGTGTTGCTTTCGATACCTTTCTCAAGCTTCGCTATTGCCATT
GGTGAGGTGTTAGAGCTTGAAAGATATACGGATTCAGCTGAAGGTTTCACTCTCCTCAAA
CCTTCTTCTTGGAGCAAGGTTGATAAAGCTGGGGCAACTGCCCTGTTTCAGGATGCAAAC
AAGGGATCCAACAATGTAGGCGTCGTGGTTATACCTGTAAAAATAACAACCCTCAGCCAA
TTCGGAACTCCACAATTCGTGGCAGATAAGCTAATTCTTGCTGAAAAGCGCAAGGAAAGT
ACAAAGGAGGCTGAAGTGGTTTCAGTATCGGAGAGAACGGGTGAAGGAGGTCTTCAAGTA
TATGAGTTTGAATACAAGGTCGATAGCACGAGGGGAGGGTTGAAGAGGATACTTTCTGCT
GCATTTGTTGCGTCTGGCAAGCTCTATCTGTTAAACATCGCTCACTCTGATGGGTCAGAA
GGTCCTATTGATCCTGATAGAAGAAATACGTTGGAACAGATTCTTCATTCCTTTGATATT
GCTCCTTCAACTTAA

Peptide Sequence

PEP ID

Solyc04g009420.3.1
PEP Infomation

PsbP domain protein (AHRD V3.3 *** G7JC63_MEDTR)
Sequence

MSAISSLVCSNIFRNGFFQCLPSISSIITPLQLKTRSRSLVVLSNEDELVPTYSTRRRAL
NVSILTVLLSIPFSSFAIAIGEVLELERYTDSAEGFTLLKPSSWSKVDKAGATALFQDAN
KGSNNVGVVVIPVKITTLSQFGTPQFVADKLILAEKRKESTKEAEVVSVSERTGEGGLQV
YEFEYKVDSTRGGLKRILSAAFVASGKLYLLNIAHSDGSEGPIDPDRRNTLEQILHSFDI
APST*

Transcript Sequence

Transcript ID

Solyc04g009420.3.1
Transcript Infomation

PsbP domain protein (AHRD V3.3 *** G7JC63_MEDTR)
Sequence

GCAGCACAAATAAGATGACCCTTCCTTTCATCTCCTCTCAATTACCGTAACACACAAATG
TCCGCCATTAGCTCACTGGTTTGCTCAAATATCTTTCGAAATGGCTTCTTTCAGTGTCTC
CCGAGCATATCATCCATTATCACTCCATTGCAGTTGAAAACGAGAAGCAGATCCTTAGTT
GTGTTATCGAATGAGGATGAGTTGGTTCCAACTTATTCAACGAGAAGACGAGCCCTGAAC
GTATCAATCTTGACGGTGTTGCTTTCGATACCTTTCTCAAGCTTCGCTATTGCCATTGGT
GAGGTGTTAGAGCTTGAAAGATATACGGATTCAGCTGAAGGTTTCACTCTCCTCAAACCT
TCTTCTTGGAGCAAGGTTGATAAAGCTGGGGCAACTGCCCTGTTTCAGGATGCAAACAAG
GGATCCAACAATGTAGGCGTCGTGGTTATACCTGTAAAAATAACAACCCTCAGCCAATTC
GGAACTCCACAATTCGTGGCAGATAAGCTAATTCTTGCTGAAAAGCGCAAGGAAAGTACA
AAGGAGGCTGAAGTGGTTTCAGTATCGGAGAGAACGGGTGAAGGAGGTCTTCAAGTATAT
GAGTTTGAATACAAGGTCGATAGCACGAGGGGAGGGTTGAAGAGGATACTTTCTGCTGCA
TTTGTTGCGTCTGGCAAGCTCTATCTGTTAAACATCGCTCACTCTGATGGGTCAGAAGGT
CCTATTGATCCTGATAGAAGAAATACGTTGGAACAGATTCTTCATTCCTTTGATATTGCT
CCTTCAACTTAA