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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g009360.3.1
CDS Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G54520.1)
Sequence

ATGGACCTTCTGTGTAAAGTCTATGGCGGAACCTCTGATGAAGAAGACGACAATGGTGGA
ATTCACCTTCAAAGACCCATTTTGCCACAGCCGAAACGAGCCAAATTCGAGAATTTTCAT
CAAGTTGGCAATCATGTGCCACTCTACAAGCCTAATCCAAGTACCAATCTCCCAGCGCAA
GCTTCCCTTCCAGGAAGATACATTTCTAAGAGAGAGAGAGCTGCCATGGATTCAGTGGAG
AAAGTTCCAGACCTCAGCACAACGGTTTCCCCTAACAGTTCACCAGTTTTAGGGAGCATT
TTGGATTCAGTTCTGCCACATAATATTTTGTCAGCTTTGAGAGATCAAACTAAAATCTAC
GGGAACATGATCCACACGCCAGAAAGACTGTCTGTAGTTCTAGATGGACACAAAAGATCA
GTTAATGCTGTACAGTGGTCTACAAGTCATGCTCACCTTTTAGTATCTGCCGGAATGGAT
CAAACTGTCTGTATATGGAATGTGTGGAGCAGAGATCAGAAGAAAGCACGTGTACTTAAT
TGTCACAAAGCGGCTGTCAAAGATGTGAAGTGGTCGCCATATGGTCTATTTGTGCTCTCT
TGTGGATATGACTGCACATCAAGGTTGATTGATGTTGAAAAAGGAACTGAAACCCAGGTT
TTCAATGAGGATCAAGTTGTTGGAGTGGTAAAATTCCATCCAGATAATTATAATCTCTTT
CTCTCTGGAGGTTCGAAAGGTCACCTTAAAATATGGGATATAAGAGCTGGGAAGGTGGTC
CATCAATATGTGCGAAATCCTGATCCTATCCTTGATGCTGAATTTACAGTTGACGCAAAG
CGAATAATTTCATCAAGTGATACATCCAAAAGCAATATTAGTGAAAATTCAATTATGGTT
TGGGATGTATCACGAGAAATCCCTCTATCTAACCAGGTTTACTGTGAAGCATATACATGT
CCCTCGATAAGATGCCACCCTTCTGATCCCAAATTCATAGCACAGTCGAATGGAAACTAC
ATAGCAATTTTCTCTACCAAGCCTCCATTTGGACTTGACAAGTACAGGAGATATGAAGGC
CATAGTGTTTCTGGATTCCCCATAAAATGCAATTTCAGCTTGGATGGTGACAAAGTGATA
TCTGGTTCCTCTGATGGATACATTTATGTTTACGACTCGAATACTTGTAAGCTCATCAGA
AAGATTAAGGCATACAATGAGGCTTGCATCGATGTTGTATTCCATCCTGTCATGTCTAAT
GTTGTTGCTTCATGTAGTTGGAGTGGACAAGTTTCAGTTGCAGTAACCTGA

Peptide Sequence

PEP ID

Solyc04g009360.3.1
PEP Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G54520.1)
Sequence

MDLLCKVYGGTSDEEDDNGGIHLQRPILPQPKRAKFENFHQVGNHVPLYKPNPSTNLPAQ
ASLPGRYISKRERAAMDSVEKVPDLSTTVSPNSSPVLGSILDSVLPHNILSALRDQTKIY
GNMIHTPERLSVVLDGHKRSVNAVQWSTSHAHLLVSAGMDQTVCIWNVWSRDQKKARVLN
CHKAAVKDVKWSPYGLFVLSCGYDCTSRLIDVEKGTETQVFNEDQVVGVVKFHPDNYNLF
LSGGSKGHLKIWDIRAGKVVHQYVRNPDPILDAEFTVDAKRIISSSDTSKSNISENSIMV
WDVSREIPLSNQVYCEAYTCPSIRCHPSDPKFIAQSNGNYIAIFSTKPPFGLDKYRRYEG
HSVSGFPIKCNFSLDGDKVISGSSDGYIYVYDSNTCKLIRKIKAYNEACIDVVFHPVMSN
VVASCSWSGQVSVAVT*

Transcript Sequence

Transcript ID

Solyc04g009360.3.1
Transcript Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G54520.1)
Sequence

AAAGACCAAACTTACATGAGTTGTACATTCCTATGGAAAGGTAGTACATAGCTGTTAGCA
GCTATAATAACTGAAAAAATGAATCCAGGTCCCAGAAGTCTTTTTTTTCTTGCATTTCAG
TCCCTTAAGAATAATATTAGTAGTTTCAACTATTACAATTCGGTCCCTTAAGAATAATAT
ACTGTATAATCAAACTTTTTGAAGAACAATTGAAGAAATTCGTCTCAATTTTGCCCTAAT
TTTAGCTCGATTGAATTTTTGTTGAATTGGGGATCGAATTTGATGGAATGGACCTTCTGT
GTAAAGTCTATGGCGGAACCTCTGATGAAGAAGACGACAATGGTGGAATTCACCTTCAAA
GACCCATTTTGCCACAGCCGAAACGAGCCAAATTCGAGAATTTTCATCAAGTTGGCAATC
ATGTGCCACTCTACAAGCCTAATCCAAGTACCAATCTCCCAGCGCAAGCTTCCCTTCCAG
GAAGATACATTTCTAAGAGAGAGAGAGCTGCCATGGATTCAGTGGAGAAAGTTCCAGACC
TCAGCACAACGGTTTCCCCTAACAGTTCACCAGTTTTAGGGAGCATTTTGGATTCAGTTC
TGCCACATAATATTTTGTCAGCTTTGAGAGATCAAACTAAAATCTACGGGAACATGATCC
ACACGCCAGAAAGACTGTCTGTAGTTCTAGATGGACACAAAAGATCAGTTAATGCTGTAC
AGTGGTCTACAAGTCATGCTCACCTTTTAGTATCTGCCGGAATGGATCAAACTGTCTGTA
TATGGAATGTGTGGAGCAGAGATCAGAAGAAAGCACGTGTACTTAATTGTCACAAAGCGG
CTGTCAAAGATGTGAAGTGGTCGCCATATGGTCTATTTGTGCTCTCTTGTGGATATGACT
GCACATCAAGGTTGATTGATGTTGAAAAAGGAACTGAAACCCAGGTTTTCAATGAGGATC
AAGTTGTTGGAGTGGTAAAATTCCATCCAGATAATTATAATCTCTTTCTCTCTGGAGGTT
CGAAAGGTCACCTTAAAATATGGGATATAAGAGCTGGGAAGGTGGTCCATCAATATGTGC
GAAATCCTGATCCTATCCTTGATGCTGAATTTACAGTTGACGCAAAGCGAATAATTTCAT
CAAGTGATACATCCAAAAGCAATATTAGTGAAAATTCAATTATGGTTTGGGATGTATCAC
GAGAAATCCCTCTATCTAACCAGGTTTACTGTGAAGCATATACATGTCCCTCGATAAGAT
GCCACCCTTCTGATCCCAAATTCATAGCACAGTCGAATGGAAACTACATAGCAATTTTCT
CTACCAAGCCTCCATTTGGACTTGACAAGTACAGGAGATATGAAGGCCATAGTGTTTCTG
GATTCCCCATAAAATGCAATTTCAGCTTGGATGGTGACAAAGTGATATCTGGTTCCTCTG
ATGGATACATTTATGTTTACGACTCGAATACTTGTAAGCTCATCAGAAAGATTAAGGCAT
ACAATGAGGCTTGCATCGATGTTGTATTCCATCCTGTCATGTCTAATGTTGTTGCTTCAT
GTAGTTGGAGTGGACAAGTTTCAGTTGCAGTAACCTGAAATGTTTAAAAAAAATTGTATC
AAGTTTTTATTGTACAGTCTGTGTTTGA