Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g009300.3.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G57180.1)
Sequence

ATGTCAGCAAAAAGGAGGGATAATGATGAGAATTATGGGTGTATATGTCCTGGTTGTGGA
ATCTTTATGCAGGATGAAGACCCAAATCATCCTGGTTATTACAAGAAAAAAAAGGTGGAA
GAAAGTTTAGAGGATTTTGTGGATGATGAGGATGTTGTTGTTGGTGAAGGTGGGGATGAT
GAAGAAGAGGAGGAATTTGGGGATTTTATTGAGGGGGAGTTGGAAGAAGGTGGAAGTTAT
GGTAACATTACACAGGAGGTTCTTGAGAAAGGAAAGAAGAAAAGGGTGTCGAAATCGGAG
AGGAAAAGGATGGCAAGGGAAGCGGCTAAGGGAGAGAAAGAGGAGGTCACGGTTTGTGCT
CGATGTCATTCATTGAGGAACTATGGACAAGTGAAGAATGAGCTGGCCGAAAACTTGATA
CCCGATTTTGATTTTGACCAGTTAATTACGAAACAAAGCCAAGATGGCTTGAAACAAAGT
AAGAAGTTGCCAAAGCTTGTTCTTGTGGCTACCAAGGTTGACCTTCTCCCTTCTCAAATT
TCCCCTGCGCGTTTGGACAAATGGGTTCGACACCGTGCTAAAGCTAATGGAGCACCTAAA
CTGAGTGGAGTTTACATGGTAAGTTCCCGTAAAGATTTAGGTATTAGAAATTTGCTGGCA
TTTATAAAAGAATTGGCTGGTCCTCGAGGAAATGTGTGGGTTATTGGGGCGCAAAATGCA
GGGAAGTCGACATTAATAAATGCATTTGCTAAGAAAGGAGGAGTTAAAGCTACAAAGCTT
ACAGAAGCTCCTGTACCTGGAACTACTCTGGGAATCCTGAGAATTGGAGGAATTTTGTCA
GCCAAGGCAAAGATGTATGACACGCCGGGCCTCCTACATCCATATCTTATGTCCATGCGA
TTAAACAGGGAGGAGCAGAAAATGCATGGGCAGACTGTACATATAGGGGGCTTAGTTAGA
CTGGATCTAGTTCAAGCCTCAGTTGAAACAATCTACGTCACTGTCTGGGCATCGCCTAGT
GTATCTCTTCATCTAGGGAAGACGGAAAATGCTGATGAGCTCAAGAACAACCATGCTGGA
GTAAGATTGCAGCCTCCCATTTCCATGGAGCGAGTTTCTGAGTTGGGACAATGGCAAAAG
AGGGAAGTAAAAGCACGTGGAACGAGCTGGGATGTCAAGAGCATGGATGTTGCGGTTGCT
GGCTTAGGATGGTTCTCCCTAGGTTTGAAAGGCGAAGCAGATTTAGCCTTGTGGACATAT
GATGGCATTCAGATCACATTGCGTGAACCATTGGTACTTGATCGTGCAGCCTCTATCGAA
CGACCTGGATTTTGGCTACCAAAGGCTATATCAGAAGCCATCGCTAACTCATCGAAGCTT
GAAGGTCAAGAAGCAAGGGAAAAGAATCCATCAGAGGAGACCATGCAACTTTCATAA

Peptide Sequence

PEP ID

Solyc04g009300.3.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G57180.1)
Sequence

MSAKRRDNDENYGCICPGCGIFMQDEDPNHPGYYKKKKVEESLEDFVDDEDVVVGEGGDD
EEEEEFGDFIEGELEEGGSYGNITQEVLEKGKKKRVSKSERKRMAREAAKGEKEEVTVCA
RCHSLRNYGQVKNELAENLIPDFDFDQLITKQSQDGLKQSKKLPKLVLVATKVDLLPSQI
SPARLDKWVRHRAKANGAPKLSGVYMVSSRKDLGIRNLLAFIKELAGPRGNVWVIGAQNA
GKSTLINAFAKKGGVKATKLTEAPVPGTTLGILRIGGILSAKAKMYDTPGLLHPYLMSMR
LNREEQKMHGQTVHIGGLVRLDLVQASVETIYVTVWASPSVSLHLGKTENADELKNNHAG
VRLQPPISMERVSELGQWQKREVKARGTSWDVKSMDVAVAGLGWFSLGLKGEADLALWTY
DGIQITLREPLVLDRAASIERPGFWLPKAISEAIANSSKLEGQEAREKNPSEETMQLS*

Transcript Sequence

Transcript ID

Solyc04g009300.3.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G57180.1)
Sequence

ATGTCAGCAAAAAGGAGGGATAATGATGAGAATTATGGGTGTATATGTCCTGGTTGTGGA
ATCTTTATGCAGGATGAAGACCCAAATCATCCTGGTTATTACAAGAAAAAAAAGGTGGAA
GAAAGTTTAGAGGATTTTGTGGATGATGAGGATGTTGTTGTTGGTGAAGGTGGGGATGAT
GAAGAAGAGGAGGAATTTGGGGATTTTATTGAGGGGGAGTTGGAAGAAGGTGGAAGTTAT
GGTAACATTACACAGGAGGTTCTTGAGAAAGGAAAGAAGAAAAGGGTGTCGAAATCGGAG
AGGAAAAGGATGGCAAGGGAAGCGGCTAAGGGAGAGAAAGAGGAGGTCACGGTTTGTGCT
CGATGTCATTCATTGAGGAACTATGGACAAGTGAAGAATGAGCTGGCCGAAAACTTGATA
CCCGATTTTGATTTTGACCAGTTAATTACGAAACAAAGCCAAGATGGCTTGAAACAAAGT
AAGAAGTTGCCAAAGCTTGTTCTTGTGGCTACCAAGGTTGACCTTCTCCCTTCTCAAATT
TCCCCTGCGCGTTTGGACAAATGGGTTCGACACCGTGCTAAAGCTAATGGAGCACCTAAA
CTGAGTGGAGTTTACATGGTAAGTTCCCGTAAAGATTTAGGTATTAGAAATTTGCTGGCA
TTTATAAAAGAATTGGCTGGTCCTCGAGGAAATGTGTGGGTTATTGGGGCGCAAAATGCA
GGGAAGTCGACATTAATAAATGCATTTGCTAAGAAAGGAGGAGTTAAAGCTACAAAGCTT
ACAGAAGCTCCTGTACCTGGAACTACTCTGGGAATCCTGAGAATTGGAGGAATTTTGTCA
GCCAAGGCAAAGATGTATGACACGCCGGGCCTCCTACATCCATATCTTATGTCCATGCGA
TTAAACAGGGAGGAGCAGAAAATGCATGGGCAGACTGTACATATAGGGGGCTTAGTTAGA
CTGGATCTAGTTCAAGCCTCAGTTGAAACAATCTACGTCACTGTCTGGGCATCGCCTAGT
GTATCTCTTCATCTAGGGAAGACGGAAAATGCTGATGAGCTCAAGAACAACCATGCTGGA
GTAAGATTGCAGCCTCCCATTTCCATGGAGCGAGTTTCTGAGTTGGGACAATGGCAAAAG
AGGGAAGTAAAAGCACGTGGAACGAGCTGGGATGTCAAGAGCATGGATGTTGCGGTTGCT
GGCTTAGGATGGTTCTCCCTAGGTTTGAAAGGCGAAGCAGATTTAGCCTTGTGGACATAT
GATGGCATTCAGATCACATTGCGTGAACCATTGGTACTTGATCGTGCAGCCTCTATCGAA
CGACCTGGATTTTGGCTACCAAAGGCTATATCAGAAGCCATCGCTAACTCATCGAAGCTT
GAAGGTCAAGAAGCAAGGGAAAAGAATCCATCAGAGGAGACCATGCAACTTTCATAA