Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g009110.1.1
CDS Infomation	Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)
Sequence	ATGACTGATGCATTTGTGTCATTTGCAGTTCAAAAATTGGGTGATTTCCTCGTACAACAA GTTTCGCTGCGTAAAAATCTGAGAAAGGAAGTTGACTCGCTGAGAAATGAGCTACTCTTC ATGCAGTCTTTCCTCAGAGAGGCAGAACAAAAGCAAAGTGGTGATCAAAGAGTTCAACAG TGGGTGTTTGAGATCAACGCTATTGCTAATGACGCTGTTGCTATACTCGAGAGTTTCAGC TTCGAGGCTGGTAAAGGTGATGATGATAGATTTGTTAGTCGTCTCAAGGCTTGCGCTTGC ATATGTAGGAAGGAGAAGAAATTATACAATGTAGCTGAGGAGATCCAATCACTCAAGCAA CGAATCATGGATATCTCTCGCAAACGAGAGACTTATGGTATTACAAATATCAATTCAGGA GAAGGGACAAGTAATCAGGTTAGAACAATGAGGAGAACTACCTCATATGTGGATGAGCAG GATAACATTTTTGTTGGACTTCAGGATGTCGTAGAAAAATTGCTAGCTCAACTTCTCAAA GCGGAGCCACGTAGAAGTGTCATCTCCATTCATGGCATGGGCGGATTAGGGAAGACCACT CTTGCAAGAAACCTCTACAACAATCCTAATATAGTGTCAAGCTTCCCTACACGCGCTTGG ATATGTGTTTCTCAAGAGTACAACACAATGGATCTTCTTAAGAATATCATAAAATCCATC CAAGGTCGCACTAAGGGAACTCTAGATTTCTTGGAAAGGATGACAGAAAGCGATCTAGAA ATTTACCTTCGTGATCTATTGAAAGAAGGCAAATACCTTGTAGTGGTTGATGATGTATGG CAGAGAGAAGCATGGGAGAGTTTGAAAAGAGCATTCCCAGATAGCAAGAAGGGCAGCAGA GTTATTATTACCACGCGGAAACATGATGTTGCGGAAAGAGCTGACAACAGAGGTTTTGTC CATAACCTTCGTTTCCTAAGCCAAAAAGAAAGTTGGGACCTCTTTTGTAGGAAACAACTT GATGTTCGGGCAATGGTTCCAGAAATGGTAAGGATAGCTAAAGATATGGTGGAAAAGTGT AGAGGCTTACCTCTTGCAATTGTTGTATTGAGCGGACTACTTTCACATAAAAGGGGGCTA GACCAATGGCAAAAAGTGAAAGATCACTTTTGGCAGAACATTCAAGATGACTCCATTCAA ATCTCCTACATACTATCATTGAGCTACAACGATTTGTCAACTACACTCAAGCAGTGTTTT CTGTACTTTGGTGTTTTCCCAGAAGATCAAGAGGTCGACGCTGAAAAGATAATACTGTTG TGGATGGCCGAGGGTCTCATACCAAATGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGA TTCTTGAATGAGCTGATAAGACGAAGTTTGATACAAGAGGTACGTTCCTTTTGGGAAAAG GTTACTGTGTGTAAGGTTCATGATTTACTTCGTGATCTTGCCGTACAAAAGGCATTCGAT ATAAAATTCTTTGACATTTATGATCCAAAAAAGCACTCCATATCCTCCTTATGCATCAGA CATGTCATTCATGGTCAAGGAGAAAGGTACCTCTCACTTGATCTTTCTCACTTGAAGTTG AGGTCAATTATGTTCTTCGATCCAGATTTTCGTAACATCCATCTTACAAACTTCAGTAGT GTGTTCCGACATATATACGTGTTGTACTTGGATATTGGAGGTTATGTTATGTCTGATGTC ATAGGAAGTTTGTACTACCTCAAGTTGTTAAGCTTGAGAGGTGTCTGTAATATTCCCTCT TCCATTAGCAACCTCAAGAATTTACAGACACTTCTTGTCGATGACCATGGAGGGTTTAGC CGTCTATCCCAAAAGACAGTTGACCTAATAAATCTAAGACATTTAGTTGCTCCATATTCA GAGCCTCTGAAATGTATAAACAAACTCACGAGTCTTCAAGTTCTTAAAGGCATTCGTTGT GATCAGTGGAAAGATGTTGACCCTGTTGATTTAGTCAATCTTCGTGAACTAAGCATGCAT GATATTACCGAATCTTACTCCCTATACAACATTAGCAGCTTGAAAAACCTTAGCACTCTC AGATTATTGTGTTATGCTGATGAATCATTCCCATCTCTTGAATTTGTCAATTCTTGTCAA AAGCTCCAGAAATTGAGGTTAAGAGGGACAATAAAGAAACTTCCTCTGTTTCCAAATTCC ATCACAATGATGGTTCTTTGGAAGTCAAAACTCAGGGTAGATCCGATGCCTATTTTGGGA ATGTTGCCAAACCTAAGGAATCTCGAATTAGAAGAAGCTTATGAAGGAAAAGAAATAACG TGCAGTGATAACAGCTTCAGTCAACTTGAGTTCCTCCGTCTTCATCGTCTTGAGATGCTA GAAACATGGCATTTAGCCACAAGTGCCATGCCTCATATTAAAGGTCTTGACATCAAATAC TGTCCACATCTATATCATATTCCCAAGAGAATGCAAGATGTGGGGATAACTCATTTTTGG CCTGTTTCGTAA

Peptide Sequence

PEP ID	Solyc04g009110.1.1
PEP Infomation	Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)
Sequence	MTDAFVSFAVQKLGDFLVQQVSLRKNLRKEVDSLRNELLFMQSFLREAEQKQSGDQRVQQ WVFEINAIANDAVAILESFSFEAGKGDDDRFVSRLKACACICRKEKKLYNVAEEIQSLKQ RIMDISRKRETYGITNINSGEGTSNQVRTMRRTTSYVDEQDNIFVGLQDVVEKLLAQLLK AEPRRSVISIHGMGGLGKTTLARNLYNNPNIVSSFPTRAWICVSQEYNTMDLLKNIIKSI QGRTKGTLDFLERMTESDLEIYLRDLLKEGKYLVVVDDVWQREAWESLKRAFPDSKKGSR VIITTRKHDVAERADNRGFVHNLRFLSQKESWDLFCRKQLDVRAMVPEMVRIAKDMVEKC RGLPLAIVVLSGLLSHKRGLDQWQKVKDHFWQNIQDDSIQISYILSLSYNDLSTTLKQCF LYFGVFPEDQEVDAEKIILLWMAEGLIPNGEERMEDVAEGFLNELIRRSLIQEVRSFWEK VTVCKVHDLLRDLAVQKAFDIKFFDIYDPKKHSISSLCIRHVIHGQGERYLSLDLSHLKL RSIMFFDPDFRNIHLTNFSSVFRHIYVLYLDIGGYVMSDVIGSLYYLKLLSLRGVCNIPS SISNLKNLQTLLVDDHGGFSRLSQKTVDLINLRHLVAPYSEPLKCINKLTSLQVLKGIRC DQWKDVDPVDLVNLRELSMHDITESYSLYNISSLKNLSTLRLLCYADESFPSLEFVNSCQ KLQKLRLRGTIKKLPLFPNSITMMVLWKSKLRVDPMPILGMLPNLRNLELEEAYEGKEIT CSDNSFSQLEFLRLHRLEMLETWHLATSAMPHIKGLDIKYCPHLYHIPKRMQDVGITHFW PVS*

Transcript Sequence

Transcript ID	Solyc04g009110.1.1
Transcript Infomation	Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)
Sequence	ATGACTGATGCATTTGTGTCATTTGCAGTTCAAAAATTGGGTGATTTCCTCGTACAACAA GTTTCGCTGCGTAAAAATCTGAGAAAGGAAGTTGACTCGCTGAGAAATGAGCTACTCTTC ATGCAGTCTTTCCTCAGAGAGGCAGAACAAAAGCAAAGTGGTGATCAAAGAGTTCAACAG TGGGTGTTTGAGATCAACGCTATTGCTAATGACGCTGTTGCTATACTCGAGAGTTTCAGC TTCGAGGCTGGTAAAGGTGATGATGATAGATTTGTTAGTCGTCTCAAGGCTTGCGCTTGC ATATGTAGGAAGGAGAAGAAATTATACAATGTAGCTGAGGAGATCCAATCACTCAAGCAA CGAATCATGGATATCTCTCGCAAACGAGAGACTTATGGTATTACAAATATCAATTCAGGA GAAGGGACAAGTAATCAGGTTAGAACAATGAGGAGAACTACCTCATATGTGGATGAGCAG GATAACATTTTTGTTGGACTTCAGGATGTCGTAGAAAAATTGCTAGCTCAACTTCTCAAA GCGGAGCCACGTAGAAGTGTCATCTCCATTCATGGCATGGGCGGATTAGGGAAGACCACT CTTGCAAGAAACCTCTACAACAATCCTAATATAGTGTCAAGCTTCCCTACACGCGCTTGG ATATGTGTTTCTCAAGAGTACAACACAATGGATCTTCTTAAGAATATCATAAAATCCATC CAAGGTCGCACTAAGGGAACTCTAGATTTCTTGGAAAGGATGACAGAAAGCGATCTAGAA ATTTACCTTCGTGATCTATTGAAAGAAGGCAAATACCTTGTAGTGGTTGATGATGTATGG CAGAGAGAAGCATGGGAGAGTTTGAAAAGAGCATTCCCAGATAGCAAGAAGGGCAGCAGA GTTATTATTACCACGCGGAAACATGATGTTGCGGAAAGAGCTGACAACAGAGGTTTTGTC CATAACCTTCGTTTCCTAAGCCAAAAAGAAAGTTGGGACCTCTTTTGTAGGAAACAACTT GATGTTCGGGCAATGGTTCCAGAAATGGTAAGGATAGCTAAAGATATGGTGGAAAAGTGT AGAGGCTTACCTCTTGCAATTGTTGTATTGAGCGGACTACTTTCACATAAAAGGGGGCTA GACCAATGGCAAAAAGTGAAAGATCACTTTTGGCAGAACATTCAAGATGACTCCATTCAA ATCTCCTACATACTATCATTGAGCTACAACGATTTGTCAACTACACTCAAGCAGTGTTTT CTGTACTTTGGTGTTTTCCCAGAAGATCAAGAGGTCGACGCTGAAAAGATAATACTGTTG TGGATGGCCGAGGGTCTCATACCAAATGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGA TTCTTGAATGAGCTGATAAGACGAAGTTTGATACAAGAGGTACGTTCCTTTTGGGAAAAG GTTACTGTGTGTAAGGTTCATGATTTACTTCGTGATCTTGCCGTACAAAAGGCATTCGAT ATAAAATTCTTTGACATTTATGATCCAAAAAAGCACTCCATATCCTCCTTATGCATCAGA CATGTCATTCATGGTCAAGGAGAAAGGTACCTCTCACTTGATCTTTCTCACTTGAAGTTG AGGTCAATTATGTTCTTCGATCCAGATTTTCGTAACATCCATCTTACAAACTTCAGTAGT GTGTTCCGACATATATACGTGTTGTACTTGGATATTGGAGGTTATGTTATGTCTGATGTC ATAGGAAGTTTGTACTACCTCAAGTTGTTAAGCTTGAGAGGTGTCTGTAATATTCCCTCT TCCATTAGCAACCTCAAGAATTTACAGACACTTCTTGTCGATGACCATGGAGGGTTTAGC CGTCTATCCCAAAAGACAGTTGACCTAATAAATCTAAGACATTTAGTTGCTCCATATTCA GAGCCTCTGAAATGTATAAACAAACTCACGAGTCTTCAAGTTCTTAAAGGCATTCGTTGT GATCAGTGGAAAGATGTTGACCCTGTTGATTTAGTCAATCTTCGTGAACTAAGCATGCAT GATATTACCGAATCTTACTCCCTATACAACATTAGCAGCTTGAAAAACCTTAGCACTCTC AGATTATTGTGTTATGCTGATGAATCATTCCCATCTCTTGAATTTGTCAATTCTTGTCAA AAGCTCCAGAAATTGAGGTTAAGAGGGACAATAAAGAAACTTCCTCTGTTTCCAAATTCC ATCACAATGATGGTTCTTTGGAAGTCAAAACTCAGGGTAGATCCGATGCCTATTTTGGGA ATGTTGCCAAACCTAAGGAATCTCGAATTAGAAGAAGCTTATGAAGGAAAAGAAATAACG TGCAGTGATAACAGCTTCAGTCAACTTGAGTTCCTCCGTCTTCATCGTCTTGAGATGCTA GAAACATGGCATTTAGCCACAAGTGCCATGCCTCATATTAAAGGTCTTGACATCAAATAC TGTCCACATCTATATCATATTCCCAAGAGAATGCAAGATGTGGGGATAACTCATTTTTGG CCTGTTTCGTAA