Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g008980.3.1
CDS Infomation

F-box/LRR protein (AHRD V3.3 *** I3SW78_MEDTR)
Sequence

ATGGCCGGCGCCGGCGACGATTCTCATCTGCAGAACGACGTCGTTTCAGTCCACTGTATA
AACGACAGTCTCGGCGACGATGAGCTTCGGGCCGTACTGTCGAGACTTGGAGACGACAAA
GACAAGGAAGTTTTCGGGCTGGTATGTAAGCGGTGGCTTCGTATTCAAAGTACTGAAAGG
AAGAAGCTTTGTGCTCGGGCCGGGCCTCACATGCTCAGAAGAATCGCGTCCCGATTCACT
CGATTACATGAGCTTGATCTATCTCAATCGGTTTCTAGATCTTTCTATCCTGGTGTTACT
GATTCTGATCTTTCAGTTATTGCTACTGCTTTCTCTTGCTTGCGAATTCTCAATCTGCAG
AACTGTAAAGGCATAACAGACAAAGGATTGGCTGCTATTGGATCAAGTCTGTCTTCTTTA
CAGTCCTTAGATGTATCCTACTGCAGAAAGATCACTGACAAGGGGCTTTCAGCTGTTGCT
GAGGGGTGTCATGACTTGAGAATATTGCATCTTTCTGGCTGTAGATTTGTCTCAGATTCA
TTAATGAAAGCTCTCTCCGAGAATTGCCATAATGTGGAAGAGATAGGTTTGCAAGGATGC
ACCAACATTACCAACTCAGGTCTCTCTGTTATGGTTGAAGGTTGCCGGAGGATAAAGCAT
TTGGACATTAACAAATGCATCAATATTGGTGATATTGGGATATCTAGTGTGTCTGAAGCT
TGTTCATTGACACTCATGACATTGAAGTTGTTGGATTGCTATAAAGTTGGTGATGACTCT
ATCTTATCCTTGGCCAACCACTGCAAAAATCTTGAGACACTCGTTATTGGTGGTTGCCGT
AACATATCAGATGAGTCCATGAAGTCACTGGCAGCTTCTTGTAGTAATAGTCTGAGGAAA
CTGAGGATGGATTGGTGCTTGAATATTACAGACTCTTCATTGGACTGCATCCTTTCCAAA
TGCAGAGAGCTTGAGGTTCTCGACATTGGCTGCTGTGAGGAGTTAACTGATGCTGCATTT
CAACAATTAGGAAGTGACAACTTTATGTTGGGGATGAAGATTTTGAAGGTCAGTAACTGT
CCAAAGATCACTGTTGAAGGAATTAAGAAGCTTATGAAGTCATGCAAATTTCTTGAATAT
CTAGACGTACGATCTTGTCCCCTTATCACTAAAGCAGGGTGTGAGGAGGCTGGAATTCAG
TTTCCTGAATCCTGCAAAATAAACTTCACTGGAAGCTTAGCAGAGCCAGATGTGTTACTT
TGA

Peptide Sequence

PEP ID

Solyc04g008980.3.1
PEP Infomation

F-box/LRR protein (AHRD V3.3 *** I3SW78_MEDTR)
Sequence

MAGAGDDSHLQNDVVSVHCINDSLGDDELRAVLSRLGDDKDKEVFGLVCKRWLRIQSTER
KKLCARAGPHMLRRIASRFTRLHELDLSQSVSRSFYPGVTDSDLSVIATAFSCLRILNLQ
NCKGITDKGLAAIGSSLSSLQSLDVSYCRKITDKGLSAVAEGCHDLRILHLSGCRFVSDS
LMKALSENCHNVEEIGLQGCTNITNSGLSVMVEGCRRIKHLDINKCINIGDIGISSVSEA
CSLTLMTLKLLDCYKVGDDSILSLANHCKNLETLVIGGCRNISDESMKSLAASCSNSLRK
LRMDWCLNITDSSLDCILSKCRELEVLDIGCCEELTDAAFQQLGSDNFMLGMKILKVSNC
PKITVEGIKKLMKSCKFLEYLDVRSCPLITKAGCEEAGIQFPESCKINFTGSLAEPDVLL
*

Transcript Sequence

Transcript ID

Solyc04g008980.3.1
Transcript Infomation

F-box/LRR protein (AHRD V3.3 *** I3SW78_MEDTR)
Sequence

ATGGCCGGCGCCGGCGACGATTCTCATCTGCAGAACGACGTCGTTTCAGTCCACTGTATA
AACGACAGTCTCGGCGACGATGAGCTTCGGGCCGTACTGTCGAGACTTGGAGACGACAAA
GACAAGGAAGTTTTCGGGCTGGTATGTAAGCGGTGGCTTCGTATTCAAAGTACTGAAAGG
AAGAAGCTTTGTGCTCGGGCCGGGCCTCACATGCTCAGAAGAATCGCGTCCCGATTCACT
CGATTACATGAGCTTGATCTATCTCAATCGGTTTCTAGATCTTTCTATCCTGGTGTTACT
GATTCTGATCTTTCAGTTATTGCTACTGCTTTCTCTTGCTTGCGAATTCTCAATCTGCAG
AACTGTAAAGGCATAACAGACAAAGGATTGGCTGCTATTGGATCAAGTCTGTCTTCTTTA
CAGTCCTTAGATGTATCCTACTGCAGAAAGATCACTGACAAGGGGCTTTCAGCTGTTGCT
GAGGGGTGTCATGACTTGAGAATATTGCATCTTTCTGGCTGTAGATTTGTCTCAGATTCA
TTAATGAAAGCTCTCTCCGAGAATTGCCATAATGTGGAAGAGATAGGTTTGCAAGGATGC
ACCAACATTACCAACTCAGGTCTCTCTGTTATGGTTGAAGGTTGCCGGAGGATAAAGCAT
TTGGACATTAACAAATGCATCAATATTGGTGATATTGGGATATCTAGTGTGTCTGAAGCT
TGTTCATTGACACTCATGACATTGAAGTTGTTGGATTGCTATAAAGTTGGTGATGACTCT
ATCTTATCCTTGGCCAACCACTGCAAAAATCTTGAGACACTCGTTATTGGTGGTTGCCGT
AACATATCAGATGAGTCCATGAAGTCACTGGCAGCTTCTTGTAGTAATAGTCTGAGGAAA
CTGAGGATGGATTGGTGCTTGAATATTACAGACTCTTCATTGGACTGCATCCTTTCCAAA
TGCAGAGAGCTTGAGGTTCTCGACATTGGCTGCTGTGAGGAGTTAACTGATGCTGCATTT
CAACAATTAGGAAGTGACAACTTTATGTTGGGGATGAAGATTTTGAAGGTCAGTAACTGT
CCAAAGATCACTGTTGAAGGAATTAAGAAGCTTATGAAGTCATGCAAATTTCTTGAATAT
CTAGACGTACGATCTTGTCCCCTTATCACTAAAGCAGGGTGTGAGGAGGCTGGAATTCAG
TTTCCTGAATCCTGCAAAATAAACTTCACTGGAAGCTTAGCAGAGCCAGATGTGTTACTT
TGAGCAGTACTTGTTTTAGCAATGTCTTTGAAGGCCTGATGGGGATCATACAGTGTAATT
ATCACCTTCTTTGCCTAAGACCTAAAATATGACTTTGGAAGCTCCTGATGTCAGTCCCTT
GTTCCCATTAATTTGCCTTTTGTTAAGCATCAAGTTTTTCTGTTGTAGATTATTCCCTGC
TTTTCAGTCATTTGATATCAAACTCCTGTATATCATCCTTGTAAACTACTAGTTAGCCCC
AATGTTTGCTGTAGGTGTTTTCAGATTGTGAATGAAATGAATCCATTGCTGCTAGTTTGA
ATGTGAACTTATACCAATCATGATGGTTTAATTGATTACACATCTCGTACAACCTGTCCA
ATGATTCTGTTGGAATAGTTCAATCACAACTGCCTGCATTTATATTTGCTGTATTAGCTG
GATGCCACAACCAATCTGATGAACAATTTAAACTGCAGATTTTATATCTTATTTCATTTT
ACCCAAAAGATAAAATAATTTGAAGACGCTATATACCATACTAATAAAAACTTGAAGGCA
GCAAAGTCTGTGAATGCAGTATTAAATTTGCATATAAACAATCTAAAATGCTAATCCTGA
AACTAGCATATTGTTCTTGTTTTCATATCTATCACTTGGGTCATAAAGTCTTCTCTAAGG
ACAAGTAGAAAGCTAAATGAATCAAAAAAAAAAAATAATCAATCTATCTCCACAAGTTTT
ATAATAAATTTGTACATTCGTATCTCTTGCTATCTCAAAAAACAAAATAAGTCTATACAA
AAGCTACCAGTTTTAGAGAAAAAAAAGTCTATACATTCCCATTAACTCTTAAGGGCACAA
AGGTTAAACCTTAAGCCTCCTTTGAGCAATGGATCTAGTTACAAAGTTTTAACAGATCCC
TGAATTCGTTTTTGCATGAACGTTTTACATTGAAGAACGAGCTCATTAGAAAAAAAAATG
TGTCTTCATAACTTGCTTGAGCTGGAGATTGCCTGCTGCAGATATCTCAGTGTCTTTTGA
TGATTGAGGAATCCCATAAACCAGAACTCAAAATCATCCTCTGTAATTACTTGTATATAC
TTCTGTGATGGCTTTTGCATATTTTTGCTCTCTTTTGCTTTCATTATCTTACTTATTGGG
ATGGTTACCTGCCATTGTGAACCAGTTAGATTATGCTTTACGTGGTTAGAAAATGAAAAG
TTGGAAGAAAAATGGAGCAGAGTTATACCTTATAGTAGATTCTAAGCAACTTTCCAGTTG
GAGATAAGAGCTTTATTGATCTCTCGCTGCAGAAAGCAATCTTATCGGTAGAGATGAAGA
GAAGGCCTGCTATTGGACCAGCTGTCGTTGATAAATAGCATTGAGAAACATTCAATAGCT
TTTCATCATCTCTAACACTGAACTTCTGCCTGAATATTTTCTCCAACCCTCCTACTTGAA
GGATTTTTGCTCCAAGGCTCAATTTTCCCTTTAAAGTTTCTGTTAGTTTCGGGCTTAGGC
TCACTGCACAATCAGAGTACATTTAGAATCAATATTTTCTGTCATGTTTACATGAATTTT
GTACTTATTACTCACTTCTCTGAGTTCTTTAGATTTACACTAGTGTTTGGTCATGACTTC
ACTTGCAAATACTTAAAGGTGAAGTTTGTCCATCAGTATTCGCAATTGGTGAACATTTTA
GCATTTGAAAGGCTGGTATAGTATGGAATTAACTTGTCTGAGTAGCAT