Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g008730.3.1
CDS Infomation

Alpha-galactosidase (AHRD V3.3 *** K4BP29_SOLLC)
Sequence

ATGGAGTTAAGATTAGGGATTAAGCTGATACTTGCATTATGTCTACTGATATCCGCCGAG
TATGGCGGTTACTCCCACCGGACGACGGCGGAAATGCGGTGGCCGGAACGGAAGCAGCGA
AAAGTGAAAGAGGATTTATTTGTAAAACGACGTAGTTTGCTCAATAATGGACTCGGCTCC
ACTCCTCCTATGGGGTGGAGTAGTTGGAATCATTTTGCCTGCAACATTGATGAGAAAGTC
ATAAGAGAAACTGCCGATGCGTTGGTTTCAACTGGTCTTGATAAGCTCGGATATAAGTAT
GTTAACATAGATGATTGCTGGGCTGAACCTCAACGCGATGATCAGGGAAATTTTGCAGCT
AAGAACTCGACATTTCCTTCTGGAATGAAAGCTTTAGCTGACTATGTTCATAGTAAAGGT
CTTAAGCTAGGAATCTACTCGGATGCAGGGTATTATACTTGTAGCAAGAAAATGCCTGGT
TCACTTGGTCATGAGGAACAAGATGCAACAACTTTTGCAGCATGGGGTATTGATTATTTG
AAGTACGATAACTGCAACCACGATGGAACAAAGCCAACTGTTAGATACCCTGTTATGACG
AGAGCTCTAATGAAAGTTGGAAGGCCTATCTTCTTTAATCTTTGTGAATGGGGCGATTTG
CATCCAGCATTGTGGGGTGGTAAATTAGGTAACAGCTGGAGAACTACGAACGATATCAGT
GATACATGGGAAAGCATGATTTCTAGAGCAGACCAGAATGAAGTTTATGCAGATTATGCA
AGGCCTGGTGGCTGGAATGATCCCGACATGCTTGAGGTTGGAAATGGAGGGATGACAAAG
GATGAATACATCATTCACTTTAGTATCTGGGCGATTTCAAAGGCTCCCCTTATCATTGGT
TGTGATGTGAGAAATTTATCACATGATACAATGGAGATTCTAGCCAACAAGGAGGTGATC
GCGGTAGATCAAGATGAGTTAGGTGTCCAGGGCAAAAAGGTTAGAATGGAAGGTGATCTT
GAGATCTGGGCAGGACCTCTATCAGGCTATAGAGTAGCTTTAGTGCTTCTCAACCGCGGT
CCTCAGAGATACGAAATAACAGCAAACTGGGATGATATCGGAATCCCTCCTAACAGCGTT
GTAATAGCAAGAGACCTTTGGGAGCACAAGACATTGGAGACAAAATTTGTAGGGAATTTG
ACAGCTACAGTGAACTCTCATGCATGCAAGATGTATGTATTGAAGCCTATTGCTTGA

Peptide Sequence

PEP ID

Solyc04g008730.3.1
PEP Infomation

Alpha-galactosidase (AHRD V3.3 *** K4BP29_SOLLC)
Sequence

MELRLGIKLILALCLLISAEYGGYSHRTTAEMRWPERKQRKVKEDLFVKRRSLLNNGLGS
TPPMGWSSWNHFACNIDEKVIRETADALVSTGLDKLGYKYVNIDDCWAEPQRDDQGNFAA
KNSTFPSGMKALADYVHSKGLKLGIYSDAGYYTCSKKMPGSLGHEEQDATTFAAWGIDYL
KYDNCNHDGTKPTVRYPVMTRALMKVGRPIFFNLCEWGDLHPALWGGKLGNSWRTTNDIS
DTWESMISRADQNEVYADYARPGGWNDPDMLEVGNGGMTKDEYIIHFSIWAISKAPLIIG
CDVRNLSHDTMEILANKEVIAVDQDELGVQGKKVRMEGDLEIWAGPLSGYRVALVLLNRG
PQRYEITANWDDIGIPPNSVVIARDLWEHKTLETKFVGNLTATVNSHACKMYVLKPIA*

Transcript Sequence

Transcript ID

Solyc04g008730.3.1
Transcript Infomation

Alpha-galactosidase (AHRD V3.3 *** K4BP29_SOLLC)
Sequence

ATCAATTTAGTCCATCGATGGCGCGAAATGTCTAATGAGTCGAACCAACTCGAAATCAAA
CTAACCCACATTGACAGCATAGTTGGGCTCGACTATTAATAAGTCGAACCCATACAAGTC
CATTTGGGTGCTAGTAAACTTGGACAGATAAACTCGATAAAATCTGATTAGATATTATCA
CCTATCATACGGTTTTCTAACTTAACTTCTTTTTCTGACCGTTCCGCTCTGTCGATCGAT
GATAGTATAAGAGATCTGTAATATGATAGTAAATATAGACTTGATTACACTAATCAAATC
CTAAAAAAATAAAAATCAAACCAGATCCAATTTAGTAATGTCACATCATGTTTTTAATTT
TCAGTATCGTAAAAATATTCAAAGCATAAAGACAAGATATTTTCTAAAAACGTGGATTGT
ATCATCATTGTCTCCTTCAATGGATGAGTTAGTCTGTAGTCAACAGCTCTTATAAAAACC
AGTACACTGAAACACCAAAAAGAATCACAAAAAAAAGTGTAGATTTCAACAAATTAGGAT
CAAAATTCAGCTAATGGAGTTAAGATTAGGGATTAAGCTGATACTTGCATTATGTCTACT
GATATCCGCCGAGTATGGCGGTTACTCCCACCGGACGACGGCGGAAATGCGGTGGCCGGA
ACGGAAGCAGCGAAAAGTGAAAGAGGATTTATTTGTAAAACGACGTAGTTTGCTCAATAA
TGGACTCGGCTCCACTCCTCCTATGGGGTGGAGTAGTTGGAATCATTTTGCCTGCAACAT
TGATGAGAAAGTCATAAGAGAAACTGCCGATGCGTTGGTTTCAACTGGTCTTGATAAGCT
CGGATATAAGTATGTTAACATAGATGATTGCTGGGCTGAACCTCAACGCGATGATCAGGG
AAATTTTGCAGCTAAGAACTCGACATTTCCTTCTGGAATGAAAGCTTTAGCTGACTATGT
TCATAGTAAAGGTCTTAAGCTAGGAATCTACTCGGATGCAGGGTATTATACTTGTAGCAA
GAAAATGCCTGGTTCACTTGGTCATGAGGAACAAGATGCAACAACTTTTGCAGCATGGGG
TATTGATTATTTGAAGTACGATAACTGCAACCACGATGGAACAAAGCCAACTGTTAGATA
CCCTGTTATGACGAGAGCTCTAATGAAAGTTGGAAGGCCTATCTTCTTTAATCTTTGTGA
ATGGGGCGATTTGCATCCAGCATTGTGGGGTGGTAAATTAGGTAACAGCTGGAGAACTAC
GAACGATATCAGTGATACATGGGAAAGCATGATTTCTAGAGCAGACCAGAATGAAGTTTA
TGCAGATTATGCAAGGCCTGGTGGCTGGAATGATCCCGACATGCTTGAGGTTGGAAATGG
AGGGATGACAAAGGATGAATACATCATTCACTTTAGTATCTGGGCGATTTCAAAGGCTCC
CCTTATCATTGGTTGTGATGTGAGAAATTTATCACATGATACAATGGAGATTCTAGCCAA
CAAGGAGGTGATCGCGGTAGATCAAGATGAGTTAGGTGTCCAGGGCAAAAAGGTTAGAAT
GGAAGGTGATCTTGAGATCTGGGCAGGACCTCTATCAGGCTATAGAGTAGCTTTAGTGCT
TCTCAACCGCGGTCCTCAGAGATACGAAATAACAGCAAACTGGGATGATATCGGAATCCC
TCCTAACAGCGTTGTAATAGCAAGAGACCTTTGGGAGCACAAGACATTGGAGACAAAATT
TGTAGGGAATTTGACAGCTACAGTGAACTCTCATGCATGCAAGATGTATGTATTGAAGCC
TATTGCTTGAAGATGTCTGCACCACACTTCTGTGTTTTCCTCTCAACTTGTTATGTTTTA
ACTATTGAAAAATGAACTTGTCATTTGTTTCAAATGTATACAAAGGATTAAACATGATTA
ATAAGATGTTATGTATGAGTTTTTTTTTTCTATATGTACTGTAGCTTTTCTGATTTTTGG
TCCTCAAATTCACATCTTATAAGTTTTAACCTTTTGAAGAATTAGTCTAAATTGTCGTCC
ACCAAACTTG